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Clc03G19500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G19500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionhydrophobic protein LTI6B-like
Genome locationClcChr03:31710329..31710801
RNA-Seq ExpressionClc03G19500
SyntenyClc03G19500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65991.1 hypothetical protein Csa_007015 [Cucumis sativus]2.6e-2398.25Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADEGTTNCIDILLAILLPPLGVFLK+GCQVEFWICLVLTFFGYIPGIIYAVYAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

OAY42463.1 hypothetical protein MANES_09G181700v8 [Manihot esculenta]1.4e-2192.98Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADEGT  CIDILLAILLPPLGVFLKYGC+ EFWICLVLTFFGYIPGIIYAVYAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

XP_004494506.1 hydrophobic protein LTI6B-like [Cicer arietinum]4.9e-2292.98Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADEGT NCIDILLAILLPPLGVFLK+GC VEFWICLVLTFFGYIPGIIYA+YAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

XP_008450512.1 PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo]2.2e-2296.49Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADE TTNCIDILLAILLPPLGVFLK+GCQVEFWICLVLTFFGYIPGIIYAVYAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

XP_038879764.1 hydrophobic protein LTI6B-like [Benincasa hispida]1.3e-2296.49Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADE TTNCIDILLAILLPPLGVFLK+GCQVEFWICLVLTFFGYIPGIIYAVYAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

TrEMBL top hitse value%identityAlignment
A0A0A0M1D6 Uncharacterized protein1.3e-2398.25Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADEGTTNCIDILLAILLPPLGVFLK+GCQVEFWICLVLTFFGYIPGIIYAVYAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

A0A1S2XTZ3 hydrophobic protein LTI6B-like2.4e-2292.98Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADEGT NCIDILLAILLPPLGVFLK+GC VEFWICLVLTFFGYIPGIIYA+YAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

A0A1S3BNR9 hydrophobic protein LTI6B-like1.1e-2296.49Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADE TTNCIDILLAILLPPLGVFLK+GCQVEFWICLVLTFFGYIPGIIYAVYAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

A0A2C9VBT6 Uncharacterized protein6.9e-2292.98Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADEGT  CIDILLAILLPPLGVFLKYGC+ EFWICLVLTFFGYIPGIIYAVYAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

A0A4Y7IL50 Uncharacterized protein1.2e-2187.72Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MADE T NCIDILLAI+LPPLGVFLK+GCQ+EFWICL+LTFFGYIPGIIYA+YAITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B8.1e-2083.02Show/hide
Query:  GTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        GT NCIDIL+AI+LPPLGVFLK+GC  EFWICL+LTF GYIPGIIYA+YAITK
Subjt:  GTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

Q0DKW8 Hydrophobic protein LTI6B8.1e-2083.02Show/hide
Query:  GTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        GT NCIDIL+AI+LPPLGVFLK+GC  EFWICL+LTF GYIPGIIYA+YAITK
Subjt:  GTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

Q8H5T6 Hydrophobic protein LTI6A1.2e-1875.44Show/hide
Query:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        MAD  T  CIDI+LAI+LPPLGVF K+GC +EFWICL+LTFFGY+PGIIYAV+ ITK
Subjt:  MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

Q9ZNQ7 Hydrophobic protein RCI2A1.9e-1673.08Show/hide
Query:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        T   +DI++AILLPPLGVFL++GC VEFWICLVLT  GYIPGIIYA+Y +TK
Subjt:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

Q9ZNS6 Hydrophobic protein RCI2B1.1e-1671.15Show/hide
Query:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        T   ++I+LAI+LPPLGVFLK+GC+VEFWICL+LT FGY+PGI+YA+Y ITK
Subjt:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family4.4e-1358.33Show/hide
Query:  IDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        +++L AI +PP+GVFL+YG  +EFW+CL+LT F +IPG+IYA+Y +TK
Subjt:  IDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

AT2G38905.1 Low temperature and salt responsive protein family7.3e-1668.63Show/hide
Query:  GTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAI
        G+   ++I+LAILLPP+GVFL+YGC VEFWICL+LT  GYIPGIIYA+Y +
Subjt:  GTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAI

AT3G05880.1 Low temperature and salt responsive protein family1.3e-1773.08Show/hide
Query:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        T   +DI++AILLPPLGVFL++GC VEFWICLVLT  GYIPGIIYA+Y +TK
Subjt:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

AT3G05890.1 Low temperature and salt responsive protein family7.8e-1871.15Show/hide
Query:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK
        T   ++I+LAI+LPPLGVFLK+GC+VEFWICL+LT FGY+PGI+YA+Y ITK
Subjt:  TTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITK

AT4G28088.1 Low temperature and salt responsive protein family4.9e-1261.54Show/hide
Query:  GTTNCIDILLAILLPPLGVFLKYG-CQVEFWICLVLTFFGYIPGIIYAVYAI
        G   C +I++AIL+PPLGV L++G C  EF ICL+LT  GY+PGIIYA+YAI
Subjt:  GTTNCIDILLAILLPPLGVFLKYG-CQVEFWICLVLTFFGYIPGIIYAVYAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACGAAGGCACAACAAACTGCATCGATATTCTTCTCGCTATTCTGCTGCCTCCTCTTGGTGTCTTTCTCAAATATGGGTGCCAAGTTGAATTTTGGATCTGCTT
GGTCTTAACTTTCTTTGGATACATCCCTGGCATCATTTATGCTGTTTATGCCATCACCAAGGGTATGGGAGATTTGGGAAGGGAACTATTAGCAAGGATGATGGAAGAAA
TTGGAACTCATGATCAACACTCCCTTGCTTTCAATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACGAAGGCACAACAAACTGCATCGATATTCTTCTCGCTATTCTGCTGCCTCCTCTTGGTGTCTTTCTCAAATATGGGTGCCAAGTTGAATTTTGGATCTGCTT
GGTCTTAACTTTCTTTGGATACATCCCTGGCATCATTTATGCTGTTTATGCCATCACCAAGGGTATGGGAGATTTGGGAAGGGAACTATTAGCAAGGATGATGGAAGAAA
TTGGAACTCATGATCAACACTCCCTTGCTTTCAATTTTTAG
Protein sequenceShow/hide protein sequence
MADEGTTNCIDILLAILLPPLGVFLKYGCQVEFWICLVLTFFGYIPGIIYAVYAITKGMGDLGRELLARMMEEIGTHDQHSLAFNF