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Clc04G00210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G00210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:670523..670816
RNA-Seq ExpressionClc04G00210
SyntenyClc04G00210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649707.1 hypothetical protein Csa_012825 [Cucumis sativus]4.1e-1759Show/hide
Query:  MATSRIMLDLVPVPAPATLEAIVPTFRESIVEVPE--SSISLPPSSDGFTTFDVSGIGARAPTPASTFLNCMPKGPIRWSAPNPKHN--DMLESTICVNT
        +AT+R MLDL   P     E+ +  FRESI EVPE  SSISLPP+SD F +FD +G+GARAP PAS  L+C PKGPI WSAPNPKHN   +  STIC  +
Subjt:  MATSRIMLDLVPVPAPATLEAIVPTFRESIVEVPE--SSISLPPSSDGFTTFDVSGIGARAPTPASTFLNCMPKGPIRWSAPNPKHN--DMLESTICVNT
KAE8649709.1 hypothetical protein Csa_012565, partial [Cucumis sativus]3.1e-1764.37Show/hide
Query:  MATSRIMLDLVPVPAPATLEAIVPTFRESIVEVPE--SSISLPPSSDGFTTFDVSGIGARAPTPASTFLNCMPKGPIRWSAPNPKHN
        MAT+R MLDL   P     E+ +  FRESI EVPE  SSISLPP+SD F +FD +G+GARAP PAS  L+C PKGPI WSAPNPKHN
Subjt:  MATSRIMLDLVPVPAPATLEAIVPTFRESIVEVPE--SSISLPPSSDGFTTFDVSGIGARAPTPASTFLNCMPKGPIRWSAPNPKHN
TrEMBL top hitse value%identityAlignment
A0A5D3CFX3 Uncharacterized protein7.3e-0436.7Show/hide
Query:  MATSRIMLDLVPVPAPATL----------EAIVPTFRES--IVEVPESSISLPPSSDGFTTFDV-SGIGARAPTPASTFLNCMPKGPIRWSAPNPKHN-D
        MATSR ML + P P  +T            A  P   E+  +     SS S+PPS   F  F+V S + A  PTP     +C PKG +R+SAP+ + N +
Subjt:  MATSRIMLDLVPVPAPATL----------EAIVPTFRES--IVEVPESSISLPPSSDGFTTFDV-SGIGARAPTPASTFLNCMPKGPIRWSAPNPKHN-D

Query:  MLESTICVN
         L S +C N
Subjt:  MLESTICVN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCTAGAATCATGCTCGATTTAGTACCAGTGCCTGCTCCAGCAACTTTGGAAGCTATAGTTCCTACTTTTAGAGAATCTATTGTCGAAGTACCTGAGTCATC
AATTTCCCTTCCTCCAAGTTCTGACGGGTTTACTACTTTTGATGTTAGTGGAATAGGTGCAAGGGCACCAACCCCTGCCTCAACCTTTCTAAATTGCATGCCTAAAGGAC
CGATTAGATGGTCTGCTCCAAATCCAAAACACAATGATATGTTGGAATCAACTATATGCGTAAACACAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCTAGAATCATGCTCGATTTAGTACCAGTGCCTGCTCCAGCAACTTTGGAAGCTATAGTTCCTACTTTTAGAGAATCTATTGTCGAAGTACCTGAGTCATC
AATTTCCCTTCCTCCAAGTTCTGACGGGTTTACTACTTTTGATGTTAGTGGAATAGGTGCAAGGGCACCAACCCCTGCCTCAACCTTTCTAAATTGCATGCCTAAAGGAC
CGATTAGATGGTCTGCTCCAAATCCAAAACACAATGATATGTTGGAATCAACTATATGCGTAAACACAACATGA
Protein sequenceShow/hide protein sequence
MATSRIMLDLVPVPAPATLEAIVPTFRESIVEVPESSISLPPSSDGFTTFDVSGIGARAPTPASTFLNCMPKGPIRWSAPNPKHNDMLESTICVNTT