; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G00230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G00230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNuclear transcription factor Y subunit
Genome locationClcChr04:987874..996392
RNA-Seq ExpressionClc04G00230
SyntenyClc04G00230
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]2.5e-9672.63Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLP
        MMS EI+ RN  DCDNQQITNY+T+NSQP R     HG  +T A M KEEK  WAW K  VDS P  KT+TK + ITLS   G   TL +KSRD S  LP
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLP

Query:  LMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRS
         MNNEHY  STSQS+L++LSMT  TSY YH PSYGGL+S FGFQTMHNS+Y+      RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRS
Subjt:  LMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRS

Query:  QRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        QRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD EGSNIS LGSESMCNGS  YQ SQLHLSAYI
Subjt:  QRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]9.8e-10177.21Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMN
        MMS EI+  NR DCDNQQITNY T+NSQP +  HGG +T A+MSKEEK  WAW KG VDS P P+T+ K M+ITLS   G ESTL +KSRD S  LPLMN
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMN

Query:  NEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
        NEHY  STSQ +L+TLSMTT TSY YH PSYGGL S F FQTMHNS+Y S MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
Subjt:  NEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD EGSNIS LGSESMCNGS+ YQ SQLHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]5.6e-8869.26Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS
        MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KS
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS

Query:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA
        RDASI LPLMNNEH   STS S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA

Query:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        EVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Subjt:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

XP_022151661.1 nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]5.6e-8869.26Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS
        MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KS
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS

Query:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA
        RDASI LPLMNNEH   STS S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA

Query:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        EVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Subjt:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]2.5e-9672.63Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLP
        MMS EI+ RN  DCDNQQITNY+T+NSQP R     HG  +T A M KEEK  WAW K  VDS P  KT+TK + ITLS   G   TL +KSRD S  LP
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLP

Query:  LMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRS
         MNNEHY  STSQS+L++LSMT  TSY YH PSYGGL+S FGFQTMHNS+Y+      RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRS
Subjt:  LMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRS

Query:  QRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        QRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD EGSNIS LGSESMCNGS  YQ SQLHLSAYI
Subjt:  QRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit1.2e-9672.63Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLP
        MMS EI+ RN  DCDNQQITNY+T+NSQP R     HG  +T A M KEEK  WAW K  VDS P  KT+TK + ITLS   G   TL +KSRD S  LP
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYW---HGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLP

Query:  LMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRS
         MNNEHY  STSQS+L++LSMT  TSY YH PSYGGL+S FGFQTMHNS+Y+      RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRS
Subjt:  LMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRS

Query:  QRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        QRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD EGSNIS LGSESMCNGS  YQ SQLHLSAYI
Subjt:  QRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

A0A1S3CEE5 Nuclear transcription factor Y subunit4.7e-10177.21Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMN
        MMS EI+  NR DCDNQQITNY T+NSQP +  HGG +T A+MSKEEK  WAW KG VDS P P+T+ K M+ITLS   G ESTL +KSRD S  LPLMN
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMN

Query:  NEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
        NEHY  STSQ +L+TLSMTT TSY YH PSYGGL S F FQTMHNS+Y S MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
Subjt:  NEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD EGSNIS LGSESMCNGS+ YQ SQLHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

A0A6J1DBT5 Nuclear transcription factor Y subunit2.7e-8869.26Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS
        MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KS
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS

Query:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA
        RDASI LPLMNNEH   STS S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA

Query:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        EVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Subjt:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

A0A6J1DFC4 Nuclear transcription factor Y subunit2.7e-8869.26Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS
        MMS   +YRNR  CDN Q      NYTTDNSQ W +WHGG       TT   MSKE+++ WAW KG V SGP PKT+ K MQ T+SPP+GGES    +KS
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRYWHGG------ATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGES-TLQHKS

Query:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA
        RDASI LPLMNNEH   STS S+LVTL M T TSY YH    GG+ M  FGFQT+ NSEY+ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  RDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGL-MSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA

Query:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        EVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS Y+ S LHLSAYI
Subjt:  EVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

A0A6J1EKQ7 Nuclear transcription factor Y subunit1.5e-6759.41Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMN
        MMS + DYR   D        Y   N QP  +W G  TTIA +SKE+K  W W  G VD+GP+P  +TK +Q T++PP  GES +  +S+DASI LPLMN
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMN

Query:  NEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
        NEHY  ST +        TT TSY Y+   YG LM  FGFQT+HNSEY       RM LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV N+ISRSQ+K
Subjt:  NEHYDGSTSQSQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI
        PYLHESRHLHAMRRERGC GRFVSKKK  E   SM DD  +GSN+S          S+ YQ S+LHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.4e-2041.24Show/hide
Query:  QHKSRDASIDLPLMNNEHYDG---STSQSQLVTLSMTTGTSYVYHHPSYGGLMS--AFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR
        + + RD+    P+ +  +Y+    S   S   T +      Y Y  P Y  + +     +  +H  +   +  QG + LP    EEPV+VNAKQYHGILR
Subjt:  QHKSRDASIDLPLMNNEHYDG---STSQSQLVTLSMTTGTSYVYHHPSYGGLMS--AFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR

Query:  RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGS
        RRQSRA+ E +N++ +S RKPYLHESRHLHA+RR RGCGGRF++ KK+ E     D    E SN+S  G  +M   S
Subjt:  RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGS

Q8VY64 Nuclear transcription factor Y subunit A-46.8e-2044.1Show/hide
Query:  SMTTGTSYVYHHPSYGGL--------MSAFGFQTMHNSEYNSI------MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPY
        S +  T+ VY  P   GL         S F  Q      Y  +      M Q  + L     EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ +KPY
Subjt:  SMTTGTSYVYHHPSYGGL--------MSAFGFQTMHNSEYNSI------MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPY

Query:  LHESRHLHAMRRERGCGGRFVSKKK-----KAETRVSMDDDDVEGSNISTLGSESMCNGSS
        +HESRHLHA+RR RGCGGRF++ KK     K E   + D++  E S  S+L SE +   +S
Subjt:  LHESRHLHAMRRERGCGGRFVSKKK-----KAETRVSMDDDDVEGSNISTLGSESMCNGSS

Q93ZH2 Nuclear transcription factor Y subunit A-36.8e-2051.4Show/hide
Query:  SYVYHHPSYGGLMSAFGFQTMHNSEYNSI-MAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGG
        S+ Y  P YGGL++A             + M  GR+ LP  + E +PV+VNAKQYH I+RRRQ RAK E +N++ R+ RKPYLHESRH+HA++R RG GG
Subjt:  SYVYHHPSYGGLMSAFGFQTMHNSEYNSI-MAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGG

Query:  RFVSKKK
        RF++ KK
Subjt:  RFVSKKK

Q945M9 Nuclear transcription factor Y subunit A-94.1e-2540.47Show/hide
Query:  WHGGATT--------IADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGE-STLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTS
        WH  A            D S +  A    S G      R  T  K  Q+T SP   G+ S    +S    I  P              QLV  ++   +S
Subjt:  WHGGATT--------IADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGE-STLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTS

Query:  YVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFV
          Y  P Y G+M A+G   +    Y   M   RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR RG GGRF 
Subjt:  YVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFV

Query:  SK------KKKAETR
         K      K+KAE +
Subjt:  SK------KKKAETR

Q9LXV5 Nuclear transcription factor Y subunit A-15.3e-2553.91Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A92.9e-2640.47Show/hide
Query:  WHGGATT--------IADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGE-STLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTS
        WH  A            D S +  A    S G      R  T  K  Q+T SP   G+ S    +S    I  P              QLV  ++   +S
Subjt:  WHGGATT--------IADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGE-STLQHKSRDASIDLPLMNNEHYDGSTSQSQLVTLSMTTGTS

Query:  YVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFV
          Y  P Y G+M A+G   +    Y   M   RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR RG GGRF 
Subjt:  YVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFV

Query:  SK------KKKAETR
         K      K+KAE +
Subjt:  SK------KKKAETR

AT5G12840.1 nuclear factor Y, subunit A13.8e-2653.91Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

AT5G12840.2 nuclear factor Y, subunit A13.8e-2653.91Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

AT5G12840.3 nuclear factor Y, subunit A13.8e-2653.91Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

AT5G12840.4 nuclear factor Y, subunit A13.8e-2653.91Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    Y   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACTGATAATTCTCAACCATGGAGGTACTGGCACGGCGGCGC
CACCACTATTGCCGACATGTCGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGCTTCGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATCA
CTCTTTCTCCACCTCGAGGTGGAGAATCAACACTACAACATAAGAGTAGAGATGCATCCATTGATCTTCCTTTGATGAATAATGAACATTATGATGGATCTACTTCCCAA
TCACAGCTTGTTACCCTTTCAATGACAACGGGTACATCGTACGTATACCACCACCCGTCCTATGGAGGACTAATGTCTGCATTTGGATTTCAAACAATGCATAATTCAGA
ATACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAAT
CCCGAGCCAAGGCCGAAGTTGAAAATAGAATATCCAGATCACAGAGGAAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGC
CGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAG
CAGCTACTATCAAGCTTCCCAACTACATTTATCTGCATATATATGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTTATATAAACCATTTTAATCTTTGCTTTGTGTTTGCCCATTTGCCACCTGTTGCCTTTCTCTCTCCCAACAAAATCTAGAATTTTCTCCCTTCCCAAACACTCCT
CTCTCTCTCTCTCTCTCTCTCTCTCCTCCCTCTATTTAATTTCTTCTTCTACACAATCTTTGAGGCTGTGTGTTTGGTAATTGGGTATCTCTTGGCTTTACAAAAATTCA
CTTTCTTTTTTATTATCCCAAACTTTCTTCCACTCCAAAACACTGTCTTGTGTTGAATTTCAATTTCTTTTGGACCCCAAAAGCTGGTCTTATCTTCTCTCTACTAAAAT
ACTGCAAATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACTGATAATTCTCAACCATGGAGGTACTGGCACG
GCGGCGCCACCACTATTGCCGACATGTCGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGCTTCGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATG
CAAATCACTCTTTCTCCACCTCGAGGTGGAGAATCAACACTACAACATAAGAGTAGAGATGCATCCATTGATCTTCCTTTGATGAATAATGAACATTATGATGGATCTAC
TTCCCAATCACAGCTTGTTACCCTTTCAATGACAACGGGTACATCGTACGTATACCACCACCCGTCCTATGGAGGACTAATGTCTGCATTTGGATTTCAAACAATGCATA
ATTCAGAATACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGA
CGGCAATCCCGAGCCAAGGCCGAAGTTGAAAATAGAATATCCAGATCACAGAGGAAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTG
TGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCA
ATGGTAGCAGCTACTATCAAGCTTCCCAACTACATTTATCTGCATATATATGATTTGGTTTTGGTGCTATGGCTTTGGGAACAACTTCTCCCTTTTCTTCCTCTACACGG
AAGATGAACACAAAAAGTATTAGGACTATATTGTTTTTTGGTGAAGTCAAATCAACTCGACGTGCAGTGGCGACACAAGAGTGGCAACACGTCCAACAATGAAAGAGGGT
CAAGAGAATTGTTGTGATGCACCCAAGGAGGACGATGCATCATCCAACACACCAAGATAAGTGGGTAAGCATGCCAAGTTCAAGTTGAACAACAAGCAAGAAGACAAGTA
TCAGTGCCATCGACAGTAGCTCAGTGGGGGTCAGGTGGGGCCCCATGCCATGATCTCAAAAGTAAGGGTCTCATCGCAAGTTTGGACGAGCAGCTCTAGAGTTAAATCCA
TATCGATGGAATATGGAAATACGTCGAATTTCATGTCAATCGGAGTTCAGATGGGCGCTCCACGCTGGTGAGTGAGCACTCACCATTTTGCAAATGCATGGGTGTCAAAG
GAAATTATTCAAAATATACTATAGGGGGAAGCATGGTGTCAGCTCTCCACCACCCTTAGGTCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGAGTGTGTCATGATGT
GGGCAAGCGTTGCAAGACGGGAATGGGATCTTGAGGACAGTGTCGGACAACACGTGTGTGTCAGCATTGTGCCCCTTCCCATGGGCTAGAGGTTCGATATTATACCCAAT
ATGCAGTTTTGGCTCGGTATTGACTCCCGTGTCCATGCCTAGATATGTCCGAATGGATGGATGTCCGGGAAGTCTCAAGTTCAAAAAATATCCATGGGGGTTGTGATGTT
TCTCGATAAGCCGGCCCGAGTAGGAGAGAGAAAGTTATTGTTGTCCCGACACTCAAGATGACATCTAGAAGCATCTGCGAGACTCGATAGTTCCCGATTGACACAATATT
TGCTGGAGTTGCCCCAGTAAGCATTATAATGTCCCCGAAAGCCCCAGTGAGTGTCTAGATCGCCTGGTAAGGCCCAATAAAGCATTCTAAGCCTGTTTTGACCCAACAAA
GGGTTCGAATTCATCCCGACAAGTTTCTGAAGCGATGTACGAATATGGGGTCGTGTTGTTGAAGATCACAATGACAAAGAGAGTCACGAAGGAGGAAAGTCGCACGTACG
AGCGACATGTAGGGTTGAATGAAGTCAGTTCCACATGAGTTCAATTCGGTTAAGAATGGAAGAACCTTGCCTAAGGTCTGACAAAGCTAGAATGGGCAAAAAGTAGATTG
GGACTTGTGTTTCTCTTAAGGCTAACCAGGACCGAGCGTAAATTATGGTGTCGCACGATTGGAGAAGCATGACCGTGACACCAAGCATGTAAATGTTCATGAAGGTCGAC
AATCAATACTACAAATCTAGGCTTTAATGTCAATTAAAAACTGACATTATAGGGATACAATGTCAATTGACAATCGACATTAAAGATCATGTTATTAAAGGTCTTCAATG
TCGGTTATCTTTAATGGCAATTTTCAACCGACATTAAAGACACTAAGAACAACCGACATTAAACACCTTTGATAACATCTTCAATGTTAGTTGTCTTTAATGTCGATCGC
CCGACATTAAATCTCTGTTTTTGTGATAGGCAATGTTTGTCGTGATTTTTTTATTTAAAATTTTTTTT
Protein sequenceShow/hide protein sequence
MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRYWHGGATTIADMSKEEKAYWAWSKGFVDSGPRPKTNTKAMQITLSPPRGGESTLQHKSRDASIDLPLMNNEHYDGSTSQ
SQLVTLSMTTGTSYVYHHPSYGGLMSAFGFQTMHNSEYNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGG
RFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYYQASQLHLSAYI