CuGenDBv2

Gene ID	Clc04G00410
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	protein POLYCHOME
Genome location	ClcChr04:1251406..1254937
RNA-Seq Expression	Clc04G00410
Synteny	Clc04G00410
Gene Ontology terms	GO:0051783 - regulation of nuclear division (biological process) GO:1904667 - negative regulation of ubiquitin protein ligase activity (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR034590 - POLYCHOME/GIGAS CELL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KGN53824.1 hypothetical protein Csa_015343 [Cucumis sativus]

2.9e-115

90.76

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT TAQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        E LTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

XP_004150162.1 protein POLYCHOME [Cucumis sativus]

2.9e-115

90.76

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT TAQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        E LTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

XP_008460799.1 PREDICTED: protein POLYCHOME [Cucumis melo]

1.7e-115

90.76

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT  AQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

XP_022966440.1 protein POLYCHOME [Cucurbita maxima]

5.5e-106

85.04

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLYRSPVFNRENT
        MSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGTPIARATTT TAQQRPTN GPGGGG      PRR+FGSPISGGIGRNRFLYRSPV +RENT
Subjt:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLYRSPVFNRENT

Query:  AASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQ
        AA SSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KI+ GIAN+
Subjt:  AASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQ

Query:  NVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        NV  +E LTPQKKLLNSIDKVEKVV EELQKL+KTPSAK+AEREKRVRTLMSFR
Subjt:  NVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

XP_038881398.1 protein POLYCHOME [Benincasa hispida]

6.6e-120

93.98

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIAR TTT TAQQRPTNPGPGGGG+N RR FGSPISGGIGRNRFLYRSPV NRENTAA SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEY+V VAGDHQEPSISLVTPKPTVGKV KI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY99 Uncharacterized protein

1.4e-115

90.76

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT TAQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        E LTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A1S3CDA1 protein POLYCHOME

8.2e-116

90.76

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT  AQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A5D3BM43 Protein POLYCHOME

8.2e-116

90.76

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT  AQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A6J1EBD1 protein POLYCHOME-like

2.6e-106

85.38

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN---PRRTFGSPISGGIGRNRFLYRSPVFNRENTA
        MSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGTPIARATTT TAQQRPTN GPGGGG     PRR+FGSPISGGIGRNRFLYRSPV +RENTA
Subjt:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN---PRRTFGSPISGGIGRNRFLYRSPVFNRENTA

Query:  ASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQN
        A SSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KI+ GIAN+N
Subjt:  ASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQN

Query:  VVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        V  +E LTPQKKLLNSIDKVEKVV EELQKL+KTPSAK+AEREKRVRTLMSFR
Subjt:  VVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A6J1HRM8 protein POLYCHOME

2.6e-106

85.04

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLYRSPVFNRENT
        MSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGTPIARATTT TAQQRPTN GPGGGG      PRR+FGSPISGGIGRNRFLYRSPV +RENT
Subjt:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLYRSPVFNRENT

Query:  AASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQ
        AA SSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KI+ GIAN+
Subjt:  AASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQ

Query:  NVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        NV  +E LTPQKKLLNSIDKVEKVV EELQKL+KTPSAK+AEREKRVRTLMSFR
Subjt:  NVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

SwissProt top hits

e value

%identity

Alignment

O48533 Protein POLYCHOME

8.9e-51

51.15

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS
        M EARDR+ERQVD+   F  RRS GI LDE     +L G+P+ R  +  T        G   G G   R  FG   +GG  R +  +RSP   REN +  
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS

Query:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK
         +RR R+R  NSVLP WYPRTPLRDI+AVVRAIER RAR+   EG G D  +P P     L+  V ++G H E   S+VTP P++G          KV +
Subjt:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK

Query:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        I+L I  +N    + LTP+KKLLNSIDKVEKVVMEE+QK+K TPSAK+AEREKRVRTLMS R
Subjt:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

Q9M2R1 Protein GIGAS CELL1

1.7e-33

43.61

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS
        M EARDR ER VD++ +FA RR  GI LDE +    LI +P+            P     GG G   R  F +   G        +R P   REN    +
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS

Query:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K
        +RR R  G   +LP WYPRTPLRDIT +VRAIER     R   G G D+      P       LE  V ++G+H+    S+VTP P+VG          K
Subjt:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K

Query:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        V K++L I  +     A  +TP+KKLLNSIDKVEK+VM E+QKLK TP AK+ EREKRVRTLM+ R
Subjt:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

Arabidopsis top hits

e value

%identity

Alignment

AT2G42260.1 uv-b-insensitive 4

6.3e-52

51.15

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS
        M EARDR+ERQVD+   F  RRS GI LDE     +L G+P+ R  +  T        G   G G   R  FG   +GG  R +  +RSP   REN +  
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS

Query:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK
         +RR R+R  NSVLP WYPRTPLRDI+AVVRAIER RAR+   EG G D  +P P     L+  V ++G H E   S+VTP P++G          KV +
Subjt:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK

Query:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        I+L I  +N    + LTP+KKLLNSIDKVEKVVMEE+QK+K TPSAK+AEREKRVRTLMS R
Subjt:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

AT3G57860.1 UV-B-insensitive 4-like

1.2e-34

43.61

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS
        M EARDR ER VD++ +FA RR  GI LDE +    LI +P+            P     GG G   R  F +   G        +R P   REN    +
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS

Query:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K
        +RR R  G   +LP WYPRTPLRDIT +VRAIER     R   G G D+      P       LE  V ++G+H+    S+VTP P+VG          K
Subjt:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K

Query:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        V K++L I  +     A  +TP+KKLLNSIDKVEK+VM E+QKLK TP AK+ EREKRVRTLM+ R
Subjt:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGGAAGCAAGAGATAGATTGGAGAGGCAAGTGGATCATGCCGAGGTATTTGCTCGTCGGAGATCCGAAGGTATATTGGACGAGCAAGAAATGAATTCTCATTTGAT
AGGTACTCCGATTGCACGCGCTACAACGACGCCTACTGCTCAACAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTTCGAATCCCAGACGCACTTTTGGTTCTCCCA
TTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTGTTTAACCGCGAGAATACGGCGGCTTCGAGTTCCCGGCGGAATAGATCTCGGGGTAGAAACAGT
GTGTTACCGATTTGGTACCCAAGAACCCCTCTCCGCGACATAACTGCAGTTGTGAGGGCAATTGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGA
CAATAGTCCTGCTCCCTCGGACGAAAGAGCTTTAGAGTATAGCGTGTCTGTGGCAGGTGATCATCAAGAGCCAAGCATTTCTCTGGTCACCCCAAAACCAACCGTAGGTA
AAGTTCCAAAGATAATTCTTGGAATCGCGAATCAGAATGTGGTAGGGGCCGAGACTCTCACTCCCCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTA
ATGGAGGAATTGCAGAAATTGAAAAAAACTCCCAGTGCGAAGAAAGCAGAGAGGGAGAAAAGGGTTCGTACTTTAATGTCGTTTCGTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAGGGCACGTGTAGGTTTAATGAATTATTTCAAAAGTTTTTAAGTAGCGCCCAAAATTTGGCATTTGAAATCTGCCCAAAATTTGGCCTTCTCTCAAAGCAGCTCCA
TCTTCTTCCCTCTCATTTTTCAACTGCGCCTCACACAAGAGACCGCCTCCCACCAATCCACCGCCATTTTTTTTGGTCAAAGGTTAAACAATACTCCATTGAAGCCCACT
GGAATCTCACGTTCCATAATGTCGGAAGCAAGAGATAGATTGGAGAGGCAAGTGGATCATGCCGAGGTATTTGCTCGTCGGAGATCCGAAGGTATATTGGACGAGCAAGA
AATGAATTCTCATTTGATAGGTACTCCGATTGCACGCGCTACAACGACGCCTACTGCTCAACAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTTCGAATCCCAGAC
GCACTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTGTTTAACCGCGAGAATACGGCGGCTTCGAGTTCCCGGCGGAATAGA
TCTCGGGGTAGAAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTCCGCGACATAACTGCAGTTGTGAGGGCAATTGAAAGGACAAGAGCTCGCTTGAGAGAAAA
CGAAGGCCAAGGAAGTGACAATAGTCCTGCTCCCTCGGACGAAAGAGCTTTAGAGTATAGCGTGTCTGTGGCAGGTGATCATCAAGAGCCAAGCATTTCTCTGGTCACCC
CAAAACCAACCGTAGGTAAAGTTCCAAAGATAATTCTTGGAATCGCGAATCAGAATGTGGTAGGGGCCGAGACTCTCACTCCCCAGAAGAAGCTCTTGAACTCCATAGAC
AAAGTGGAGAAAGTAGTAATGGAGGAATTGCAGAAATTGAAAAAAACTCCCAGTGCGAAGAAAGCAGAGAGGGAGAAAAGGGTTCGTACTTTAATGTCGTTTCGTTGATT
CATTTCAACACGAACACATTCCCTGAATTCTTTTGGCAATCATCAGACTTAACTCAGCAACTTTAGGATGAATCATCTGCTGATGATTACTTTGGTAAAGAGCGCCCATT
GATCAGAGGGAGGGAGAAGGAGAAGGAGAGATCCTCATCTTCTGATGAGATCTCATCTCTGGGGAGGATTATGTGTTAGTTTGGTTTCCAAAATGAATCCTTTTCATTTA
CAAAAAAAAAAAATAATAAAAAAGAAAAAAAAAGAAAAACCATCTTTGCTTCTTTCAGATGTTCAGTAGTAGTAAGCTTTTACAATATATAGGGTATTTTGTTGTTGTAG
GGTCTGCCTTTGTTTACTACAGATTATAGATATAGCTAAAGCAGGCCTTTTTTTGGGCGATGGAAATGATGTAAATAGAAATTTTATTCACTCTAGAATTTGAATTTTTT
GCCTTTTGATGATTGGCTGTTTATCATCAGGTTTGAATCTGA

Protein sequence

Show/hide protein sequence

MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSSRRNRSRGRNS
VLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGAETLTPQKKLLNSIDKVEKVV
MEELQKLKKTPSAKKAEREKRVRTLMSFR

Clc04G00410 (gene) of Watermelon (cordophanus) v2 genome