; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G00490 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G00490
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:1585765..1586178
RNA-Seq ExpressionClc04G00490
SyntenyClc04G00490
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8477469.1 hypothetical protein FH972_025335 [Carpinus fangiana]1.6e-4898.98Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

KAF7117209.1 hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii]1.1e-4695.92Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENK RSGDSRIGQPF+LLLNPWA KRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

KAG1346717.1 hypothetical protein COCNU_06G005460 [Cocos nucifera]7.3e-4693.88Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSL V GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

KAG5222336.1 Vacuolar protein sorting-associated protein [Salix suchowensis]2.3e-4796.94Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLL NPWAGKRQPGELKHLS+QRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

VVW91297.1 unnamed protein product, partial [Nymphaea colorata]7.3e-4693.88Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSL V GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

TrEMBL top hitse value%identityAlignment
A0A200PP59 Uncharacterized protein1.3e-4593.88Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKIL FSSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

A0A2N9HUL9 Uncharacterized protein ycf682.2e-4897.96Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

A0A2P2JY74 Uncharacterized protein ycf685.4e-4796Show/hide
Query:  MDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHS  LKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS+QRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

A0A5K1HX37 Uncharacterized protein (Fragment)3.5e-4693.88Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSL V GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

A0A5N6L0U6 Uncharacterized protein7.6e-4998.98Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        MDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCC
AGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCAT
GGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAG
mRNA sequenceShow/hide mRNA sequence
AACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTT
AGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGA
CGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAAC
TGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGT
Protein sequenceShow/hide protein sequence
MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP