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Clc04G00725 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G00725
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:2202534..2202746
RNA-Seq ExpressionClc04G00725
SyntenyClc04G00725
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6743831.1 hypothetical protein POTOM_052534 [Populus tomentosa]8.9e-0654.55Show/hide
Query:  ILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        +L + +  + VSG   + APAPAPG +AG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  ILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

KAG6744821.1 hypothetical protein POTOM_051461 [Populus tomentosa]3.4e-0551.47Show/hide
Query:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        A++  SKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAV+G SL LSLL  L+
Subjt:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

KAG6769237.1 hypothetical protein POTOM_024855 [Populus tomentosa]4.0e-0654.29Show/hide
Query:  AKLFTSKAFLVAAFILAVCSTGSLVSGV-ADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        A++  SKAFL+   I A     ++VSG  ++  APAPAPG EAG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  AKLFTSKAFLVAAFILAVCSTGSLVSGV-ADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

PNS97965.1 hypothetical protein POPTR_016G052200 [Populus trichocarpa]3.4e-0547.14Show/hide
Query:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        MA+    KA ++   +L + +  + VS    + APAPAPG +AG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

PNS97967.1 hypothetical protein POPTR_016G052400 [Populus trichocarpa]2.6e-0550.72Show/hide
Query:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        + ++  SKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAVVG SL LSLL  L+
Subjt:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

TrEMBL top hitse value%identityAlignment
A0A2K1XB04 Uncharacterized protein1.3e-0550.72Show/hide
Query:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        + ++  SKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAVVG SL LSLL  L+
Subjt:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

A0A4U5NMG4 Uncharacterized protein1.6e-0551.47Show/hide
Query:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        A++  SKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAV+G SL LSLL  L+
Subjt:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

A9P8U7 Uncharacterized protein2.8e-0550.72Show/hide
Query:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        A++   KAFL+   I A     +  S   +  APAPAPG EAG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

U5FKQ0 Uncharacterized protein1.6e-0547.14Show/hide
Query:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        MA+    KA ++   +L + +  + VS    + APAPAPG +AG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

U7DW91 Uncharacterized protein2.2e-0547.83Show/hide
Query:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        A++   KAFL+    L + +   + +  ++  APAPAPG EAG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  AKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGCTTTTCACTTCCAAAGCCTTCTTGGTTGCCGCCTTCATCCTTGCCGTCTGCTCCACCGGCAGCTTGGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCCCC
TGCTCCTGGGCGTGAGGCCGGATCTGGCTTCTCTCTGCCAATCTCCGGCGCCGTCGTTGGCTCCTCTCTTCTCCTTTCTCTTCTTCACCTTCTCAGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGCTTTTCACTTCCAAAGCCTTCTTGGTTGCCGCCTTCATCCTTGCCGTCTGCTCCACCGGCAGCTTGGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCCCC
TGCTCCTGGGCGTGAGGCCGGATCTGGCTTCTCTCTGCCAATCTCCGGCGCCGTCGTTGGCTCCTCTCTTCTCCTTTCTCTTCTTCACCTTCTCAGGCATTGA
Protein sequenceShow/hide protein sequence
MAKLFTSKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH