CuGenDBv2

Gene ID	Clc04G01070
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Serine-rich adhesin for platelets
Genome location	ClcChr04:2972459..2976937
RNA-Seq Expression	Clc04G01070
Synteny	Clc04G01070
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134219.3 uncharacterized protein DDB_G0271670 [Cucumis sativus]

2.4e-51

66.09

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Query:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM
        LS KK  Q E+GF RSKST TP RGKFLDPYH EDYSPKNRGWIW LFDLSTKSHS+RKIDHGGL+E  KI  L TA  SEKLKGKC  TSK F  TG  
Subjt:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM

Query:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV
        EDD+GG +DSP  SQAS  +SSFERKV RS+SVGC + SFS +FFE        T     S R GK + NPTAV
Subjt:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV

XP_008438897.1 PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo]

1.1e-51

66.67

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Query:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM
        LS KK  Q EVGF RSKST TP RGKFLDPYH EDYSPKNRGWIW LFDLSTKSHS+RKIDHGGL+E  KI  L TA  SEKLKGKC  TSK F  TG  
Subjt:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM

Query:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV
        EDD+GG +DSP  SQAS  +SSFERKV RS+SVGC + SFS +FFE        T     S R GK + NPTAV
Subjt:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV

XP_022955503.1 uncharacterized protein LOC111457510 [Cucurbita moschata]

3.3e-32

59.31

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Query:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD
        KK  Q E GF R KST TP RGKFLDPYHGEDY+PKNRGWIW LFDLSTKSHSSRKIDHG                    K K   T K F+GT   EDD
Subjt:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD

Query:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE
            EDSP  S   AS  +SSFERKV RS+SVGC + SFS +FFE
Subjt:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE

XP_022979846.1 uncharacterized protein LOC111479418 [Cucurbita maxima]

5.6e-32

58.62

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Query:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD
        KK  Q E GF R KST TP RGKFLDPYHGEDY+PKNRGWIW LFDLSTK HSSRKIDHG                    K KC  T K  +GT   EDD
Subjt:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD

Query:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE
            EDSP  S   AS  +SSFERKV RS+SVGC + SFS +FFE
Subjt:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE

XP_038878096.1 uncharacterized protein DDB_G0271670 [Benincasa hispida]

2.9e-52

68.42

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Query:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD
        KK NQ EVGF RSKST TP RGKFLDPYHGEDYSPKNRGWIW LFDLSTKSHS RKIDHGGL+E  KI  L TA  SEKLKGKC  TSK F+GTG  EDD
Subjt:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD

Query:  EGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV
        +GG EDSP  SQAS  +SSFERKV RS+SVGC + SFS + FE        T     S R GK + NPTAV
Subjt:  EGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7Y1 Uncharacterized protein

1.2e-51

66.09

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Query:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM
        LS KK  Q E+GF RSKST TP RGKFLDPYH EDYSPKNRGWIW LFDLSTKSHS+RKIDHGGL+E  KI  L TA  SEKLKGKC  TSK F  TG  
Subjt:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM

Query:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV
        EDD+GG +DSP  SQAS  +SSFERKV RS+SVGC + SFS +FFE        T     S R GK + NPTAV
Subjt:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV

A0A1S3AY44 uncharacterized protein DDB_G0271670

5.3e-52

66.67

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Query:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM
        LS KK  Q EVGF RSKST TP RGKFLDPYH EDYSPKNRGWIW LFDLSTKSHS+RKIDHGGL+E  KI  L TA  SEKLKGKC  TSK F  TG  
Subjt:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM

Query:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV
        EDD+GG +DSP  SQAS  +SSFERKV RS+SVGC + SFS +FFE        T     S R GK + NPTAV
Subjt:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV

A0A5A7U5P3 Serine-rich adhesin for platelets

5.3e-52

66.67

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Query:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM
        LS KK  Q EVGF RSKST TP RGKFLDPYH EDYSPKNRGWIW LFDLSTKSHS+RKIDHGGL+E  KI  L TA  SEKLKGKC  TSK F  TG  
Subjt:  LSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMM

Query:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV
        EDD+GG +DSP  SQAS  +SSFERKV RS+SVGC + SFS +FFE        T     S R GK + NPTAV
Subjt:  EDDEGGSEDSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWR-GKTQNNPTAV

A0A6J1GU50 uncharacterized protein LOC111457510

1.6e-32

59.31

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Query:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD
        KK  Q E GF R KST TP RGKFLDPYHGEDY+PKNRGWIW LFDLSTKSHSSRKIDHG                    K K   T K F+GT   EDD
Subjt:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD

Query:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE
            EDSP  S   AS  +SSFERKV RS+SVGC + SFS +FFE
Subjt:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE

A0A6J1IRX9 uncharacterized protein LOC111479418

2.7e-32

58.62

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Query:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD
        KK  Q E GF R KST TP RGKFLDPYHGEDY+PKNRGWIW LFDLSTK HSSRKIDHG                    K KC  T K  +GT   EDD
Subjt:  KKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDD

Query:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE
            EDSP  S   AS  +SSFERKV RS+SVGC + SFS +FFE
Subjt:  EGGSEDSPKDS--QASTLISSFERKVLRSKSVGCTNWSFSDNFFE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06868.1 unknown protein

6.7e-07

29.88

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Query:  LSPKKNNQLEVGFHRSKSTATPT-------RGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSH----SSRKIDHGGLQEILKITLLLTATMSEKLKGKCMN
        L+ KK N L      S S+++ +       R K     +GE +S + R   W  F L +  H    +++K+D+       + T   T T S ++ G    
Subjt:  LSPKKNNQLEVGFHRSKSTATPT-------RGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSH----SSRKIDHGGLQEILKITLLLTATMSEKLKGKCMN

Query:  TSKAFTGTG----MMEDDEGGSE---DSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFE
              G G    + E+DE  ++   ++P +       SSF RKVLRS+SVGC + SFS +FFE
Subjt:  TSKAFTGTG----MMEDDEGGSE---DSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFE

AT5G49100.1 unknown protein

2.3e-07

32.69

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Query:  VLTLSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDL-STKSH-SSRKID--HGGL-QEILKITLLLTATM-SEKLKGKCMNTS
        +LT S   +    + + RS+ST T         Y   D SP+ R   W  F L S+K H SS+K+   H  + Q   K  L  T T+ S        + S
Subjt:  VLTLSPKKNNQLEVGFHRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDL-STKSH-SSRKID--HGGL-QEILKITLLLTATM-SEKLKGKCMNTS

Query:  KAFTGTGMMEDDEGGSE-DSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFE
        K   G G    +  G +    +D   +  ++  ERKV RS+SVGC + SFS +FFE
Subjt:  KAFTGTGMMEDDEGGSE-DSPKDSQASTLISSFERKVLRSKSVGCTNWSFSDNFFE

Sequences

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CDS sequence

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ATGAAGTCTCACCCTCTTACTGGCTCGAGAGGGCTTAGAATTGAGGGGAGGAAGAAGAAGACGACCAATGTGAATTGGAGTGGAATTCGGGAAGAAATCGTGGTGAAAGT
GAAGCTGAAAATGAGAACAGGTCTGCTGTTCGCGCAGTCTGGGCAAAGTCTGGTAGCGAGCGAGTCCAGAGTGCTTAGCCTACATAACAACTCGTCTAAGCCTACCACCA
TCAACGTCTTTGGTCAAGGTATAAGGTTGACAGTGAATGTCATAAGAGGGTCGATGTCTACTGTCCTCACACTTTCTCCTAAGAAGAACAACCAGCTGGAGGTAGGTTTC
CACCGGTCTAAATCCACTGCCACTCCAACTAGAGGGAAATTTCTAGATCCTTACCACGGTGAAGATTATAGCCCTAAAAATAGAGGATGGATTTGGTATCTGTTTGATCT
TTCTACTAAATCTCATTCATCGAGAAAAATTGATCACGGTGGTTTGCAGGAGATTTTGAAGATCACATTGCTACTGACCGCTACGATGTCGGAGAAGCTAAAAGGGAAAT
GCATGAACACGTCTAAAGCATTTACTGGAACCGGCATGATGGAGGACGACGAAGGTGGTAGCGAGGATAGTCCGAAGGATAGTCAAGCTTCCACCTTGATCTCGTCGTTT
GAACGGAAGGTTTTGAGATCTAAATCCGTTGGCTGCACCAACTGGAGTTTCTCCGACAACTTTTTTGAAAATCACCGGTTTCAGCGACTGTACACTACGGAGAGTGGAGT
CTCATGGAGAGGGAAAACCCAAAATAACCCCACCGCAGTTTAA

mRNA sequence

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Protein sequence

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MKSHPLTGSRGLRIEGRKKKTTNVNWSGIREEIVVKVKLKMRTGLLFAQSGQSLVASESRVLSLHNNSSKPTTINVFGQGIRLTVNVIRGSMSTVLTLSPKKNNQLEVGF
HRSKSTATPTRGKFLDPYHGEDYSPKNRGWIWYLFDLSTKSHSSRKIDHGGLQEILKITLLLTATMSEKLKGKCMNTSKAFTGTGMMEDDEGGSEDSPKDSQASTLISSF
ERKVLRSKSVGCTNWSFSDNFFENHRFQRLYTTESGVSWRGKTQNNPTAV

Clc04G01070 (gene) of Watermelon (cordophanus) v2 genome