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Clc04G01190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G01190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin-responsive protein
Genome locationClcChr04:3361554..3362050
RNA-Seq ExpressionClc04G01190
SyntenyClc04G01190
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3972041.1 hypothetical protein CMV_004413 [Castanea mollissima]1.1e-3771.43Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHH
        M E KKMKVKKGWL V+VGL++EDG  +RFV+PIS+LYHPLFK+LL+KA E+YGYH  GPLRLPCSVDDFL LRWRIEKES+      NHHH H H  HH
Subjt:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHH

Query:  YHLPLALSFQSC
         HLP ALSF SC
Subjt:  YHLPLALSFQSC

KAG6603262.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]6.6e-5188.5Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENH-HHRHRHHYH
        MPEKKKMKVKKGWL VEVGLQEEDGRIERFVVPISYL+HPLFK LLDKAQE+YGYHANGPLRLPCSVDDFLQ+RW+IEKESDQNNDK+NH HHRHRH+ +
Subjt:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENH-HHRHRHHYH

Query:  HYHLPLALSFQSC
        HY++PLALSFQSC
Subjt:  HYHLPLALSFQSC

KAG6603263.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]4.3e-5088.5Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKEN-HHHRHRHHYH
        MPEKKKMKVKKGWL VEVGLQEEDGRIERFVVPISYL+HPLFK LLDKAQE+YGYHANGPLRLPCSVDDFLQLRW+IEKESDQNNDK+N  +HRHRH+ H
Subjt:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKEN-HHHRHRHHYH

Query:  HYHLPLALSFQSC
        HY++PLALSFQSC
Subjt:  HYHLPLALSFQSC

KGN54862.1 hypothetical protein Csa_012431 [Cucumis sativus]2.3e-5190.27Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHH-HRHRHHYH
        MPEKKKMKVKKGWL VEVGLQEED R+ERFVVPISYLYHPLFK LLDKAQEIYGYHANGPLRLPCSVDDFLQLRW+IEKESDQ+ DK+NHH HR+RHH+H
Subjt:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHH-HRHRHHYH

Query:  HYHLPLALSFQSC
        HYHLPLALSFQSC
Subjt:  HYHLPLALSFQSC

XP_022154927.1 auxin-responsive protein SAUR32-like [Momordica charantia]1.2e-4787.61Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQ-EEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYH
        M E+KKMKVKKGWL VEVGLQ EEDGRIERFVVPISYLYHPLFKKLLDKAQE+YGYHANGPLRLPCSVDDFLQLRWRI+KESDQ +D +N  HRHR H+H
Subjt:  MPEKKKMKVKKGWLVVEVGLQ-EEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYH

Query:  HYHLPLALSFQSC
        HYHLPLALSFQSC
Subjt:  HYHLPLALSFQSC

TrEMBL top hitse value%identityAlignment
A0A0A0L2M8 SAUR family protein1.1e-5190.27Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHH-HRHRHHYH
        MPEKKKMKVKKGWL VEVGLQEED R+ERFVVPISYLYHPLFK LLDKAQEIYGYHANGPLRLPCSVDDFLQLRW+IEKESDQ+ DK+NHH HR+RHH+H
Subjt:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHH-HRHRHHYH

Query:  HYHLPLALSFQSC
        HYHLPLALSFQSC
Subjt:  HYHLPLALSFQSC

A0A0D2Q1A1 Uncharacterized protein3.4e-3768.18Show/hide
Query:  EKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHHYH
        +KK  KVKKGWL V VGL+EEDG ++RF +PIS+LYHPLFK+LLDKA E+YGYH  GPLRLPCS DDFL L+WRIE+ES       NHHH H HH+HH+H
Subjt:  EKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHHYH

Query:  LPLALSFQSC
         PL LSF SC
Subjt:  LPLALSFQSC

A0A2N9INR0 Uncharacterized protein2.0e-3771.82Show/hide
Query:  EKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHHYH
        + KKMKVKKGWL V+VGL++EDG  +RFV+PISYLYHPLFK+LL+KA E+YGYH  GPLRLPCSVDDFL LRWRIEKES       NHHH H +H HH H
Subjt:  EKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHHYH

Query:  LPLALSFQSC
        LP ALSF SC
Subjt:  LPLALSFQSC

A0A6J1DN07 auxin-responsive protein SAUR32-like5.6e-4887.61Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQ-EEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYH
        M E+KKMKVKKGWL VEVGLQ EEDGRIERFVVPISYLYHPLFKKLLDKAQE+YGYHANGPLRLPCSVDDFLQLRWRI+KESDQ +D +N  HRHR H+H
Subjt:  MPEKKKMKVKKGWLVVEVGLQ-EEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYH

Query:  HYHLPLALSFQSC
        HYHLPLALSFQSC
Subjt:  HYHLPLALSFQSC

A0A7N2MR82 Uncharacterized protein5.3e-3871.43Show/hide
Query:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHH
        M E KKMKVKKGWL V+VGL++EDG  +RFV+PIS+LYHPLFK+LL+KA E+YGYH  GPLRLPCSVDDFL LRWRIEKES+      NHHH H H  HH
Subjt:  MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHH

Query:  YHLPLALSFQSC
         HLP ALSF SC
Subjt:  YHLPLALSFQSC

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A51.2e-0740Show/hide
Query:  KKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQL
        K++ V KG+  V VG      ++ RF +P+SYL  P F++LL +A+E +GY H  G L +PC  ++FL +
Subjt:  KKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQL

P33080 Auxin-induced protein X10A6.5e-0945.59Show/hide
Query:  KKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFL
        K ++V KG+LVV VG      ++ RF++P+SYL  P F+ LL++A+E +GY H  G L +PC  D+FL
Subjt:  KKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFL

P33083 Auxin-induced protein 6B1.4e-0847.76Show/hide
Query:  KKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDF
        K + V+KG+L V VG      ++ RFV+P+SYL  P F+ LL +A+E +GY H NG L +PCS D F
Subjt:  KKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDF

Q41220 Auxin-responsive protein SAUR152.7e-0738.16Show/hide
Query:  KKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQLRWRIE
        ++     +G++ V VG  E D + +R+VVP+SYL  PLF++LL K++E +GY H  G L +PC    F  +  +I+
Subjt:  KKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQLRWRIE

Q9ZUZ3 Auxin-responsive protein SAUR324.8e-1242.16Show/hide
Query:  KKKMKVK---KGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRH--RHHY
        K+ +KVK   KG L ++VG Q E+   +RF+VP+ Y  HPLF +LL +A++ YG+   G + +PC V++F  ++  I+ E    N   NHHHRH  R  Y
Subjt:  KKKMKVK---KGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRH--RHHY

Query:  HH
        HH
Subjt:  HH

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family3.4e-1342.16Show/hide
Query:  KKKMKVK---KGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRH--RHHY
        K+ +KVK   KG L ++VG Q E+   +RF+VP+ Y  HPLF +LL +A++ YG+   G + +PC V++F  ++  I+ E    N   NHHHRH  R  Y
Subjt:  KKKMKVK---KGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRH--RHHY

Query:  HH
        HH
Subjt:  HH

AT3G61900.1 SAUR-like auxin-responsive protein family1.9e-1140Show/hide
Query:  VKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKE
        V KG L ++VG +EE+   +RFVVP+ Y  HPLF +LL +A+E YG+   G + +PC V+ F  ++  I +E   ++D +
Subjt:  VKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKE

AT4G00880.1 SAUR-like auxin-responsive protein family1.5e-1341.3Show/hide
Query:  KVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQ---NNDKENHHHRHRH
        KV KG L V+VG  EE    ERFV+P+ Y  HPLF +LL +A+E +G+   G + +PC V++F  ++  I++E+ +    N  ++HHH H H
Subjt:  KVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQ---NNDKENHHHRHRH

AT4G22620.1 SAUR-like auxin-responsive protein family1.1e-1145.33Show/hide
Query:  EKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRI
        E K   V +G LVV VG   ED R  R VVP+ Y  HPLF +LL++A+ +YG+   G + +PC V DF +++ RI
Subjt:  EKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRI

AT5G53590.1 SAUR-like auxin-responsive protein family1.2e-1337.63Show/hide
Query:  VKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENH-HHRHRHHYHH
        V KG + + VG ++++  + RFVVP+ +L HPLF  LL +A++ YG+  +GP+ +PC VD+F  ++  I++E+ + +    H H+ H HH +H
Subjt:  VKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENH-HHRHRHHYHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGTAGTGGAAGTAGGGTTGCAAGAGGAAGATGGAAGAATAGAAAGATTTGTGGTTCCCATATCCTATTT
ATATCACCCTTTATTCAAGAAGCTCTTGGACAAAGCTCAAGAAATCTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTCGGTTGACGACTTTCTCCAGCTCC
GGTGGCGGATTGAGAAAGAATCTGACCAAAACAACGATAAAGAAAATCACCACCACCGCCATCGCCATCACTACCACCACTATCACCTTCCACTTGCTTTGTCTTTCCAG
TCTTGTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAACCAAAGCAAAACATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGTAGTGGAAGTAGGGTTGCAAGAGGAAGATGGAAGAATAGAAAGA
TTTGTGGTTCCCATATCCTATTTATATCACCCTTTATTCAAGAAGCTCTTGGACAAAGCTCAAGAAATCTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTC
GGTTGACGACTTTCTCCAGCTCCGGTGGCGGATTGAGAAAGAATCTGACCAAAACAACGATAAAGAAAATCACCACCACCGCCATCGCCATCACTACCACCACTATCACC
TTCCACTTGCTTTGTCTTTCCAGTCTTGTTGAGGAATTTTGTTAGTTTTTTTTATGGTTTTAGGGTTAGAAGATGTGAACCCTAATTCAAGAACATGTGTGTCTTGGCTT
TCTTCTTGCTGTATATCTTTTAAAATTGGCAAAGAAGATGGATTTGTGTTTCGACAT
Protein sequenceShow/hide protein sequence
MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNDKENHHHRHRHHYHHYHLPLALSFQ
SC