; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G01425 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G01425
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr04:3837121..3838076
RNA-Seq ExpressionClc04G01425
SyntenyClc04G01425
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004497 - monooxygenase activity (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059246.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.2e-4783.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

KAA0063208.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.2e-4783.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

KGN55010.2 hypothetical protein Csa_012448 [Cucumis sativus]3.2e-4884.62Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD KRDAG CTTCTWIIHEYSMCLQ+PK   GK+ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        P I+
Subjt:  PSIM

KGN55015.2 hypothetical protein Csa_011982, partial [Cucumis sativus]3.2e-4884.62Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD KRDAG CTTCTWIIHEYSMCLQ+PK   GK+ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        P I+
Subjt:  PSIM

TYK13716.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.2e-4783.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

TrEMBL top hitse value%identityAlignment
A0A5A7U5V5 S-protein homolog5.9e-4883.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

A0A5A7UYG6 S-protein homolog5.9e-4883.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

A0A5D3CQ97 S-protein homolog5.9e-4883.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

A0A5D3CQA2 S-protein homolog7.7e-4883.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+P T  GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

A0A5D3CTD8 S-protein homolog5.9e-4883.65Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE
        GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKE
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKE

Query:  PSIM
        PSI+
Subjt:  PSIM

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 26.1e-1036.84Show/hide
Query:  HCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAG---LCTT--CTWIIHEYSMCLQNPKTTDGKQICYTY
        HCKSK+DDLG   L  G+S+SF F     G TL++CSF W   ++ + F+++   RD+G    C +  C W I     C  N +T     +CY +
Subjt:  HCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAG---LCTT--CTWIIHEYSMCLQNPKTTDGKQICYTY

F4JZG1 S-protein homolog 41.5e-1642.06Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLL-GTTLFYCSFVWTGQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTTDGKQICYT
        G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W GQ +  WFN++D  RD    G+ C  C W I +Y  C +  +  D   ICY 
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLL-GTTLFYCSFVWTGQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTTDGKQICYT

Query:  YGDKEPS
        +     S
Subjt:  YGDKEPS

O23020 S-protein homolog 51.6e-1846.51Show/hide
Query:  LQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC
        + +++ G P+T+HCKSK DDLG+HV+   Q Y FKF+PNL  +TLF+CSF W  Q +   F+++D +RD G+C  C W I     C
Subjt:  LQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC

P0DN93 S-protein homolog 292.2e-1544.87Show/hide
Query:  VTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCL
        +T+ C+SK+DDLG H+LL GQ++ +KFRP+   TTLF C F+W   + + WF+ +   RD G C +C W I+  S C+
Subjt:  VTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCL

Q9FMQ4 S-protein homolog 38.3e-1540Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTTDGKQICYTY
        G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +   F+++D  RD       C  C W I     C+ + ++     ICY +
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTTDGKQICYTY

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.1e-1946.51Show/hide
Query:  LQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC
        + +++ G P+T+HCKSK DDLG+HV+   Q Y FKF+PNL  +TLF+CSF W  Q +   F+++D +RD G+C  C W I     C
Subjt:  LQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC

AT3G16970.1 Plant self-incompatibility protein S1 family2.2e-1534.31Show/hide
Query:  IPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGL----CTTCTWIIHEYSMCLQNPKTTDGKQICYTYG
        +P+  HCKSKNDDLG   + +  ++SF+FRP++ G TLF+C F+W    +++WF+++   RD       C  C W I +   C  N K ++   +C  + 
Subjt:  IPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGL----CTTCTWIIHEYSMCLQNPKTTDGKQICYTYG

Query:  DK
         +
Subjt:  DK

AT3G17080.1 Plant self-incompatibility protein S1 family5.5e-1440Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGL----CTTCTWIIHEYSMCLQNPKT
        G+P+  HCKS+ DDLG   L  G+S+SF F P++ G TLFYC F W  +  I  F+++   RD       C  C W I +   C    KT
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGL----CTTCTWIIHEYSMCLQNPKT

AT5G12060.1 Plant self-incompatibility protein S1 family5.9e-1640Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTTDGKQICYTY
        G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +   F+++D  RD       C  C W I     C+ + ++     ICY +
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTTDGKQICYTY

AT5G12070.1 Plant self-incompatibility protein S1 family1.1e-1742.06Show/hide
Query:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLL-GTTLFYCSFVWTGQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTTDGKQICYT
        G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W GQ +  WFN++D  RD    G+ C  C W I +Y  C +  +  D   ICY 
Subjt:  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLL-GTTLFYCSFVWTGQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTTDGKQICYT

Query:  YGDKEPS
        +     S
Subjt:  YGDKEPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAGAATTTCAAACTCGAACTTCAGCATGTATTGATCGGCATACCAGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGACTTCATGTCCTTCTGCTTGG
ACAAAGCTACTCATTCAAGTTTAGACCTAACCTCTTGGGGACGACATTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTTGACC
ACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCACCGATGGCAAACAAATTTGCTATACCTAT
GGAGATAAAGAACCAAGCATTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAAGAATTTCAAACTCGAACTTCAGCATGTATTGATCGGCATACCAGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGACTTCATGTCCTTCTGCTTGG
ACAAAGCTACTCATTCAAGTTTAGACCTAACCTCTTGGGGACGACATTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTTGACC
ACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCACCGATGGCAAACAAATTTGCTATACCTAT
GGAGATAAAGAACCAAGCATTATGTAA
Protein sequenceShow/hide protein sequence
MYKNFKLELQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTY
GDKEPSIM