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Clc04G02670 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G02670
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:8437618..8437884
RNA-Seq ExpressionClc04G02670
SyntenyClc04G02670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833175.1 hypothetical protein [Synechococcus sp. PCC 7002]6.8e-1169.39Show/hide
Query:  MTYSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLA
        MTYSYA N+FDR  W+TNEWVD+ YEFR TNRRQTQAGMLE     ++A
Subjt:  MTYSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLA

WP_217833202.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]2.4e-0853.12Show/hide
Query:  LEADVANNLAAQLANMTSMLQTLVLRNQ----------------ASVDCPQCGGGHLYDMCPYN
        +E D  +NL+AQ+ANMTS+LQT+ L NQ                ASV C QCG GHLYDMCPYN
Subjt:  LEADVANNLAAQLANMTSMLQTLVLRNQ----------------ASVDCPQCGGGHLYDMCPYN

XP_038874978.1 putative uncharacterized protein DDB_G0279653 [Benincasa hispida]1.4e-0836.63Show/hide
Query:  TYSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLAAQLANMTSMLQTLVLR---------------NQASVDCPQCGGGHLYDMCPY
        TY+ A+ + DR   +T++WVDD Y  R   RR+    ++ AD    LAAQ+A +TS+LQT+ +                  A+++C Q GGGH  +MCP 
Subjt:  TYSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLAAQLANMTSMLQTLVLR---------------NQASVDCPQCGGGHLYDMCPY

Query:  N
        N
Subjt:  N

XP_038880418.1 uncharacterized protein LOC120072068 [Benincasa hispida]5.4e-0834.65Show/hide
Query:  TYSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLAAQLANMTSMLQTLV---------------LRNQASVDCPQCGGGHLYDMCPY
        TY+ A+ + DR   +T+EW+D+ YE R + +R+ ++ ++ A+  N+LAAQ+A +TS+LQT+V               L   A++ C Q G GH  ++C  
Subjt:  TYSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLAAQLANMTSMLQTLV---------------LRNQASVDCPQCGGGHLYDMCPY

Query:  N
        N
Subjt:  N

XP_038902511.1 uncharacterized protein LOC120089170 [Benincasa hispida]2.1e-0734Show/hide
Query:  YSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLAAQLANMTSMLQTL---------------VLRNQASVDCPQCGGGHLYDMCPYN
        Y+ A+ + DR   +T++WVD+ Y  R   RR+ ++ ++  D+   LAAQ+A +TS+LQ +                L   A + C QCG GH  +MCP N
Subjt:  YSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLAAQLANMTSMLQTL---------------VLRNQASVDCPQCGGGHLYDMCPYN

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACTCATATGCCAGAAATCTTTTCGACAGAACTCCATGGGACACCAATGAGTGGGTGGATGACAGATATGAATTTCGTCCCACCAATAGAAGGCAAACGCAAGC
TGGAATGCTTGAAGCTGATGTTGCCAACAATCTTGCAGCGCAGCTCGCCAATATGACATCCATGCTGCAAACACTAGTCTTGAGAAATCAAGCATCTGTAGACTGCCCGC
AGTGTGGTGGGGGGCACTTGTATGACATGTGTCCCTACAACCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTACTCATATGCCAGAAATCTTTTCGACAGAACTCCATGGGACACCAATGAGTGGGTGGATGACAGATATGAATTTCGTCCCACCAATAGAAGGCAAACGCAAGC
TGGAATGCTTGAAGCTGATGTTGCCAACAATCTTGCAGCGCAGCTCGCCAATATGACATCCATGCTGCAAACACTAGTCTTGAGAAATCAAGCATCTGTAGACTGCCCGC
AGTGTGGTGGGGGGCACTTGTATGACATGTGTCCCTACAACCTCTAG
Protein sequenceShow/hide protein sequence
MTYSYARNLFDRTPWDTNEWVDDRYEFRPTNRRQTQAGMLEADVANNLAAQLANMTSMLQTLVLRNQASVDCPQCGGGHLYDMCPYNL