; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G02680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G02680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:8437981..8438949
RNA-Seq ExpressionClc04G02680
SyntenyClc04G02680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833202.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]7.7e-1255.68Show/hide
Query:  EQQPQRGNPPGFNQWNQGQFHQYSRDPQADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEA
        EQQPQRGNPPGFNQ NQGQ+HQ+ RDPQAD S+S   +ESLL E            +AM Q+Q  A  NLE+ M Q+   LENE+Q A
Subjt:  EQQPQRGNPPGFNQWNQGQFHQYSRDPQADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEA

XP_017233063.1 PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus]7.8e-0440.57Show/hide
Query:  PPGFNQWNQGQFHQYSRDPQADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEALLSTTEVPLGNLEEQCQGET
        PPGF+Q             QA +S+SL   E++L E   K EA+R   EA++Q+QA ++ NLE Q+ Q+A EL N     L S TE P G   E C+  T
Subjt:  PPGFNQWNQGQFHQYSRDPQADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEALLSTTEVPLGNLEEQCQGET

Query:  SSSGKI
          SGK+
Subjt:  SSSGKI

XP_038874882.1 uncharacterized protein LOC120067385 [Benincasa hispida]4.6e-0438.79Show/hide
Query:  RTEQQPQRGNPPGFNQWNQGQFHQYSRDPQADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEALLSTTEVPLG
        R  QQ + G PP F Q +Q     ++R   A  S SL  +E LL E  ++       ++ +L++QA++I NLEIQ+ QIA EL+N +   L S T+ P  
Subjt:  RTEQQPQRGNPPGFNQWNQGQFHQYSRDPQADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEALLSTTEVPLG

Query:  NL-EEQCQGETSSSGK
        N  +EQC   T  SGK
Subjt:  NL-EEQCQGETSSSGK

XP_038885789.1 uncharacterized protein LOC120076081 [Benincasa hispida]2.0e-0424.74Show/hide
Query:  HRTEQQPQRGNPPGFNQWNQGQFHQYSRDPQ-----ADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEALLST
        H+      RGNPP F   NQ Q +  S  P+     ++ SSS S +E+LL +   K EA R       Q+QA++I NLE+Q+ Q+A+EL+N+    L S+
Subjt:  HRTEQQPQRGNPPGFNQWNQGQFHQYSRDPQ-----ADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEALLST

Query:  TEVPLGNLEEQCQGETSSSGKINLIAHNEGTQGNLQSLNVPTSQPMENTMHIVQHPSSFTESDDEENIERREKATQAEPASIYEATTSERILIDVQEEIS
        +E P  + +EQCQ  T  SGK                     + PM +   + + P     ++D      R  +++A  ++  E+        D + + S
Subjt:  TEVPLGNLEEQCQGETSSSGKINLIAHNEGTQGNLQSLNVPTSQPMENTMHIVQHPSSFTESDDEENIERREKATQAEPASIYEATTSERILIDVQEEIS

Query:  TPRVGDQVKFNMINALNDTDYFQFCLMNADINEKTKTVNAALRNEILKDGEDGEDDEINLFSDRQLEKSEWSNRFAVKIEPLLKEPSTHEL
         P      +   +N  ++       +   +  E+  +    L++ + K  + GE++ + L         E S  F   I   +K+P +  L
Subjt:  TPRVGDQVKFNMINALNDTDYFQFCLMNADINEKTKTVNAALRNEILKDGEDGEDDEINLFSDRQLEKSEWSNRFAVKIEPLLKEPSTHEL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGGACTGAGCAGCAGCCGCAGAGAGGCAACCCTCCTGGTTTCAACCAATGGAATCAAGGTCAGTTTCATCAGTATTCGAGGGATCCACAGGCGGACGAATCATC
CTCATTGTCTCCCATGGAATCTCTTTTAGGAGAAGAAAACAGTAAAATTGAAGCAACGCGCCAGTTGCATGAAGCGATGCTCCAGAACCAAGCCACTGCAATTTGCAATT
TAGAAATTCAAATGAATCAAATTGCAGTGGAGCTCGAAAATGAAAAGCAAGAAGCATTGCTAAGTACAACTGAAGTTCCACTAGGGAACTTAGAAGAACAATGTCAAGGT
GAGACATCGTCAAGTGGGAAAATCAATCTCATAGCGCATAATGAGGGGACACAAGGAAACTTGCAATCCTTAAATGTTCCAACAAGTCAACCAATGGAGAATACAATGCA
TATTGTTCAGCATCCATCATCATTCACCGAATCAGATGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGGCAGAACCTGCGTCTATATATGAAGCTACCACTT
CTGAACGCATCCTGATTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATATGATTAACGCATTGAACGATACTGATTATTTTCAATTT
TGTCTAATGAACGCAGATATCAATGAAAAGACAAAAACTGTGAACGCGGCGTTGAGAAATGAAATCCTCAAGGACGGTGAAGATGGTGAAGATGATGAAATTAATTTATT
CTCCGATCGACAATTAGAGAAATCAGAATGGAGCAACAGATTCGCAGTAAAGATCGAGCCGCTATTAAAAGAGCCTTCAACGCATGAACTACAAACCAGACCAATGCATC
TCAACTGTGCGCGCATAAGGGAGGTCATCATGTACTTCATTGTCGCCTCTGCGTTGAACCTTGATCGCGATAAAGGCTGGCAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGGACTGAGCAGCAGCCGCAGAGAGGCAACCCTCCTGGTTTCAACCAATGGAATCAAGGTCAGTTTCATCAGTATTCGAGGGATCCACAGGCGGACGAATCATC
CTCATTGTCTCCCATGGAATCTCTTTTAGGAGAAGAAAACAGTAAAATTGAAGCAACGCGCCAGTTGCATGAAGCGATGCTCCAGAACCAAGCCACTGCAATTTGCAATT
TAGAAATTCAAATGAATCAAATTGCAGTGGAGCTCGAAAATGAAAAGCAAGAAGCATTGCTAAGTACAACTGAAGTTCCACTAGGGAACTTAGAAGAACAATGTCAAGGT
GAGACATCGTCAAGTGGGAAAATCAATCTCATAGCGCATAATGAGGGGACACAAGGAAACTTGCAATCCTTAAATGTTCCAACAAGTCAACCAATGGAGAATACAATGCA
TATTGTTCAGCATCCATCATCATTCACCGAATCAGATGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGGCAGAACCTGCGTCTATATATGAAGCTACCACTT
CTGAACGCATCCTGATTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATATGATTAACGCATTGAACGATACTGATTATTTTCAATTT
TGTCTAATGAACGCAGATATCAATGAAAAGACAAAAACTGTGAACGCGGCGTTGAGAAATGAAATCCTCAAGGACGGTGAAGATGGTGAAGATGATGAAATTAATTTATT
CTCCGATCGACAATTAGAGAAATCAGAATGGAGCAACAGATTCGCAGTAAAGATCGAGCCGCTATTAAAAGAGCCTTCAACGCATGAACTACAAACCAGACCAATGCATC
TCAACTGTGCGCGCATAAGGGAGGTCATCATGTACTTCATTGTCGCCTCTGCGTTGAACCTTGATCGCGATAAAGGCTGGCAAGTGTAA
Protein sequenceShow/hide protein sequence
MHRTEQQPQRGNPPGFNQWNQGQFHQYSRDPQADESSSLSPMESLLGEENSKIEATRQLHEAMLQNQATAICNLEIQMNQIAVELENEKQEALLSTTEVPLGNLEEQCQG
ETSSSGKINLIAHNEGTQGNLQSLNVPTSQPMENTMHIVQHPSSFTESDDEENIERREKATQAEPASIYEATTSERILIDVQEEISTPRVGDQVKFNMINALNDTDYFQF
CLMNADINEKTKTVNAALRNEILKDGEDGEDDEINLFSDRQLEKSEWSNRFAVKIEPLLKEPSTHELQTRPMHLNCARIREVIMYFIVASALNLDRDKGWQV