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Clc04G03030 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G03030
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionboron transporter 4-like
Genome locationClcChr04:8922625..8925258
RNA-Seq ExpressionClc04G03030
SyntenyClc04G03030
Gene Ontology termsGO:0015698 - inorganic anion transport (biological process)
GO:0050801 - ion homeostasis (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005452 - inorganic anion exchanger activity (molecular function)
InterPro domainsIPR003020 - Bicarbonate transporter, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK20478.1 boron transporter 4-like [Cucumis melo var. makuwa]1.5e-1190.24Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD
        S D V+ICDAEILDELTTHRGELKVRTKSFNEDRH+QIHPD
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD

XP_004151241.1 boron transporter 4 [Cucumis sativus]3.8e-1290.48Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ
        S D V+ICDAEILDELTTHRGELKVRTKSFNEDRH+QIHPDQ
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ

XP_008447479.1 PREDICTED: boron transporter 4-like [Cucumis melo]1.5e-1190.24Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD
        S D V+ICDAEILDELTTHRGELKVRTKSFNEDRH+QIHPD
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD

XP_022980113.1 boron transporter 4-like [Cucurbita maxima]2.8e-1052.44Show/hide
Query:  LIIPLYVLVLQPSWFERILVPTAYIFFASTLPAIAFGEQL-SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD
        L+ P Y+  L  + +E  L  T  +  + ++  +   + + + D VEICDAEILDELTTHRGELKVRTKSFNEDR  QIHPD
Subjt:  LIIPLYVLVLQPSWFERILVPTAYIFFASTLPAIAFGEQL-SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD

XP_038878227.1 boron transporter 4-like [Benincasa hispida]2.4e-1489.36Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNG
        + D VEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQG  NG
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNG

TrEMBL top hitse value%identityAlignment
A0A0A0L871 Uncharacterized protein1.9e-1290.48Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ
        S D V+ICDAEILDELTTHRGELKVRTKSFNEDRH+QIHPDQ
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ

A0A1S3BGZ1 boron transporter 4-like7.1e-1290.24Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD
        S D V+ICDAEILDELTTHRGELKVRTKSFNEDRH+QIHPD
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD

A0A5A7T9V6 Boron transporter 4-like7.1e-1290.24Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD
        S D V+ICDAEILDELTTHRGELKVRTKSFNEDRH+QIHPD
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD

A0A5D3DAE0 Boron transporter 4-like7.1e-1290.24Show/hide
Query:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD
        S D V+ICDAEILDELTTHRGELKVRTKSFNEDRH+QIHPD
Subjt:  SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD

A0A6J1IYB7 boron transporter 4-like1.3e-1052.44Show/hide
Query:  LIIPLYVLVLQPSWFERILVPTAYIFFASTLPAIAFGEQL-SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD
        L+ P Y+  L  + +E  L  T  +  + ++  +   + + + D VEICDAEILDELTTHRGELKVRTKSFNEDR  QIHPD
Subjt:  LIIPLYVLVLQPSWFERILVPTAYIFFASTLPAIAFGEQL-SRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPD

SwissProt top hitse value%identityAlignment
Q3E954 Probable boron transporter 61.8e-0475Show/hide
Query:  RILVPTAYIFFASTLPAIAFGEQLSRDT
        RIL PT YIFFAS+LP +AFGEQLS+ T
Subjt:  RILVPTAYIFFASTLPAIAFGEQLSRDT

Q93Z13 Probable boron transporter 31.8e-0475Show/hide
Query:  RILVPTAYIFFASTLPAIAFGEQLSRDT
        RIL PT YIFFAS +P I FGEQL RDT
Subjt:  RILVPTAYIFFASTLPAIAFGEQLSRDT

Q9SSG5 Putative boron transporter 55.1e-0753.57Show/hide
Query:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ--GIGNG
        ++F    S   V+ CDAEILDELTT RGELKVRT   NED+  QI+P +   +G+G
Subjt:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ--GIGNG

Q9SUU1 Probable boron transporter 72.3e-0478.57Show/hide
Query:  RILVPTAYIFFASTLPAIAFGEQLSRDT
        RIL PT YIF AS LP IAFGEQLSR+T
Subjt:  RILVPTAYIFFASTLPAIAFGEQLSRDT

Q9SUU1 Probable boron transporter 74.4e-0363.64Show/hide
Query:  EICDAEILDELTTHRGELKVRTKSFNEDRHSQI
        E  DAEILDE+TT RGELK RT S  EDR   +
Subjt:  EICDAEILDELTTHRGELKVRTKSFNEDRHSQI

Q9XI23 Boron transporter 41.5e-0651.85Show/hide
Query:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNG
        ++F    S+  V+  DAEILDELTT RGELKVRT + NED+ +QI+P + +  G
Subjt:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNG

Arabidopsis top hitse value%identityAlignment
AT1G15460.1 HCO3- transporter family1.0e-0751.85Show/hide
Query:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNG
        ++F    S+  V+  DAEILDELTT RGELKVRT + NED+ +QI+P + +  G
Subjt:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNG

AT1G74810.1 HCO3- transporter family3.6e-0853.57Show/hide
Query:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ--GIGNG
        ++F    S   V+ CDAEILDELTT RGELKVRT   NED+  QI+P +   +G+G
Subjt:  IAFGEQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQ--GIGNG

AT3G06450.1 HCO3- transporter family1.3e-0575Show/hide
Query:  RILVPTAYIFFASTLPAIAFGEQLSRDT
        RIL PT YIFFAS +P I FGEQL RDT
Subjt:  RILVPTAYIFFASTLPAIAFGEQLSRDT

AT3G06450.2 HCO3- transporter family1.3e-0575Show/hide
Query:  RILVPTAYIFFASTLPAIAFGEQLSRDT
        RIL PT YIFFAS +P I FGEQL RDT
Subjt:  RILVPTAYIFFASTLPAIAFGEQLSRDT

AT5G25430.1 HCO3- transporter family1.3e-0575Show/hide
Query:  RILVPTAYIFFASTLPAIAFGEQLSRDT
        RIL PT YIFFAS+LP +AFGEQLS+ T
Subjt:  RILVPTAYIFFASTLPAIAFGEQLSRDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTCATTGAATTCCCTTTTTGGTTTTAACTTCATTACTTTCTTCCCATACTCTCGCCAACTACCTTTGAACTCATTTCTCTACTGCATACTACTAGGCGTCGATGT
CTCAAACGCACACTACTATGCGTTTGTGCCTTACTACATAATACCATGCGTCAACCTGAACCGCAATCTATCATGCGTCCATGATCTTCCTCCTATCCTTGAGGATTCCT
TAATTATCCCTCTATACGTTCTTGTACTTCAGCCATCATGGTTTGAAAGAATTTTGGTCCCAACTGCTTACATTTTTTTCGCTTCTACACTTCCTGCCATTGCTTTTGGT
GAGCAATTGAGCCGAGATACAGTTGAAATATGTGATGCTGAAATACTTGATGAGTTGACAACCCATAGAGGGGAGTTGAAAGTTAGAACTAAAAGCTTCAACGAGGATAG
ACACAGTCAGATTCATCCTGACCAAGGCATTGGAAATGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTTCATTGAATTCCCTTTTTGGTTTTAACTTCATTACTTTCTTCCCATACTCTCGCCAACTACCTTTGAACTCATTTCTCTACTGCATACTACTAGGCGTCGATGT
CTCAAACGCACACTACTATGCGTTTGTGCCTTACTACATAATACCATGCGTCAACCTGAACCGCAATCTATCATGCGTCCATGATCTTCCTCCTATCCTTGAGGATTCCT
TAATTATCCCTCTATACGTTCTTGTACTTCAGCCATCATGGTTTGAAAGAATTTTGGTCCCAACTGCTTACATTTTTTTCGCTTCTACACTTCCTGCCATTGCTTTTGGT
GAGCAATTGAGCCGAGATACAGTTGAAATATGTGATGCTGAAATACTTGATGAGTTGACAACCCATAGAGGGGAGTTGAAAGTTAGAACTAAAAGCTTCAACGAGGATAG
ACACAGTCAGATTCATCCTGACCAAGGCATTGGAAATGGCTAG
Protein sequenceShow/hide protein sequence
MRSLNSLFGFNFITFFPYSRQLPLNSFLYCILLGVDVSNAHYYAFVPYYIIPCVNLNRNLSCVHDLPPILEDSLIIPLYVLVLQPSWFERILVPTAYIFFASTLPAIAFG
EQLSRDTVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNG