| GenBank top hits | e value | %identity | Alignment |
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| KAG7587118.1 Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis thaliana x Arabidopsis arenosa] | 7.6e-72 | 80.61 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
MRSD GGEFTS EF KYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSK+LPKE W EAVACAVYL N+SPT+SISGK PQEAWSGRKP +S
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI H H+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+TKKTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| KYP44533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.1e-73 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| KYP66219.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.1e-73 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.1e-73 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.1e-73 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A151RPT4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-74 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| A0A151TGP0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-74 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| A0A151TGQ2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-74 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| A0A151TPU3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-74 | 81.82 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD GGEFTS EFQKYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSKKLPKEFW EAVACAVYL+N+SPTRS+SGK PQEAWSGRKP IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI HVH+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+++KTI+SR+V+FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| Q9C536 Copia-type polyprotein, putative | 6.3e-72 | 79.39 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
MRSD GGEFTS EF KYCED GI R LTV SPQQNGVAERKNRTIL M RSMLKSK+LPKE W EAVACAVYL N+SPT+S+SGK PQEAWSGRKP +S
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
HL VFGSI H H+ DEKRSKLDDKS+KYIFIGYD+++KGYKLYNP+TKKTI+SR+++FDEEGEWD
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDEEGEWD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-32 | 46.54 | Show/hide |
Query: DHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSI--SGKMPQEAWSGRKPEISH
D+G E+ SNE +++C GI LTV +PQ NGV+ER RTI R+M+ KL K FW EAV A YL N+ P+R++ S K P E W +KP + H
Subjt: DHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSI--SGKMPQEAWSGRKPEISH
Query: LIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
L VFG+ +VHI + K+ K DDKS K IF+GY+ + G+KL++ +K I++RDV+ DE
Subjt: LIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
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| P0C2I6 Transposon Ty1-LR3 Gag-Pol polyprotein | 4.3e-09 | 27.81 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
++ D G E+T+ K+ E GI T ++ + +GVAER NRT+L+ R+ L+ LP W A+ + + N + Q A +IS
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTI
L+ FG V+ SK+ + + ++ GY +Y P+ KKT+
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.5e-42 | 51.25 | Show/hide |
Query: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
+RSD+GGE+TS EF++YC +GI TV +PQ NGVAER NRTI+ +RSML+ KLPK FW EAV A YL N+SP+ ++ ++P+ W+ ++ S
Subjt: MRSDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEIS
Query: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
HL VFG H+ E+R+KLDDKS IFIGY GY+L++P KK I SRDV+F E
Subjt: HLIVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.2e-20 | 34.18 | Show/hide |
Query: SDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEISHL
SD+GGEF + +Y +GI + +P+ NG++ERK+R I+ ++L +PK +W A A AVYL N+ PT + + P + G P L
Subjt: SDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEISHL
Query: IVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
VFG + + + KLDDKS + +F+GY + Y + T + +SR V FDE
Subjt: IVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.0e-19 | 34.81 | Show/hide |
Query: SDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEISHL
SD+GGEF + Y +GI F + +P+ NG++ERK+R I+ M ++L +PK +W A + AVYL N+ PT + + P + G+ P L
Subjt: SDHGGEFTSNEFQKYCEDYGIHRFLTVSSSPQQNGVAERKNRTILNMIRSMLKSKKLPKEFWTEAVACAVYLSNQSPTRSISGKMPQEAWSGRKPEISHL
Query: IVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
VFG + + R KL+DKS + F+GY + Y + T + SR V FDE
Subjt: IVFGSITHVHISDEKRSKLDDKSDKYIFIGYDSSTKGYKLYNPNTKKTILSRDVIFDE
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