; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G03570 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G03570
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSignal transducer and activator of transcription A-like
Genome locationClcChr04:11341929..11342973
RNA-Seq ExpressionClc04G03570
SyntenyClc04G03570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038880330.1 uncharacterized protein LOC120071970 [Benincasa hispida]6.6e-0935.14Show/hide
Query:  APGRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIKEK-TRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLE
        A GRALI+VQ+   TI+V DQQVKFN++N LK P D ++ Q + +++E+        L+++    +   EE  + + ++  FE    S R+  + K  LE
Subjt:  APGRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIKEK-TRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLE

Query:  EPSTHELETRPTHPKYAHL-REIMLQFIVSSALNPECDKGSIDPRKHN
        EP   EL++ P H KY +L     L  I+S++L+ E ++  I   K+N
Subjt:  EPSTHELETRPTHPKYAHL-REIMLQFIVSSALNPECDKGSIDPRKHN

XP_038880387.1 uncharacterized protein LOC120072039 [Benincasa hispida]7.1e-1139.71Show/hide
Query:  APGRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIK-EKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLE
        A GR+LI+VQ+   TI V DQ+VKFNV+N LK P D ++CQ I +++ E+   T   +++E  +D+   EE+   +  +  FE    S R++ +IK  LE
Subjt:  APGRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIK-EKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLE

Query:  EPSTHELETRPTHPKYAHL-REIMLQFIVSSALNPE
        EP   EL+  P H KYA+L     L  I+S++L+ E
Subjt:  EPSTHELETRPTHPKYAHL-REIMLQFIVSSALNPE

XP_038882389.1 uncharacterized protein LOC120073658 [Benincasa hispida]8.7e-0939.55Show/hide
Query:  APGRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIK-EKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLE
        A GRALI+VQ+E  TI V DQ+VKFNV+N LK  +D ++CQ I +++ E+       +++E  +D    EE+   + ++  FE    S  +   IK  LE
Subjt:  APGRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIK-EKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLE

Query:  EPSTHELETRPTHPKYAHL-REIMLQFIVSSALN
        EP   EL+  P H KYA+L     L  I+S++LN
Subjt:  EPSTHELETRPTHPKYAHL-REIMLQFIVSSALN

XP_038888126.1 uncharacterized protein LOC120078022 [Benincasa hispida]6.4e-1229.64Show/hide
Query:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKT---------------NPTIKQDQRTQG---------------
        EA   +QA+++R+LE Q+ Q+  ELK++  G L S++E      KEQCQ VTL  GKT               + T+   Q T                 
Subjt:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKT---------------NPTIKQDQRTQG---------------

Query:  ---------------------------NSQPLN----------SPTT---SQPTQSNTAP-GRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQ
                                   N  P++           PTT       +S T P GRALI+VQ+E  TI V DQQVKFNV++ LK P D ++CQ
Subjt:  ---------------------------NSQPLN----------SPTT---SQPTQSNTAP-GRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQ

Query:  MIAD-IKEKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLEEPSTHELETRPTHPKYAHL-REIMLQFIVSSALNPECDKGS
         + + ++E   +    L++E        EE+   +  +  FE    S R++   K  +EEP   +L++ P H KYA+L     L  I+S++L+ E     
Subjt:  MIAD-IKEKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLEEPSTHELETRPTHPKYAHL-REIMLQFIVSSALNPECDKGS

Query:  IDPRKHN
        I   K+N
Subjt:  IDPRKHN

XP_038889338.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120079251 [Benincasa hispida]7.1e-1130.38Show/hide
Query:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIKQDQRTQGNSQPLNSPTTSQPTQSNTAPGRALI-NVQE
        EA   +QA +++ LE Q+ Q+  ELK +T G    ++ +     KEQC  VTL  G+T                  +P   +   + + P +  I + Q+
Subjt:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIKQDQRTQGNSQPLNSPTTSQPTQSNTAPGRALI-NVQE

Query:  EISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIK-EKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLEEPSTHELETRP
           TI V DQ+VKFNV+N LK P   ++ Q I +++ E+   T   +++E  +D    EE+   + +   F+    S R++  IK  LEEPS  +L+  P
Subjt:  EISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIK-EKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLEEPSTHELETRP

Query:  THPKYAHL-REIMLQFIVSSALNPECDKGSIDPRKHN
         H KYA+L     L  I+S++L+ E +   I   ++N
Subjt:  THPKYAHL-REIMLQFIVSSALNPECDKGSIDPRKHN

TrEMBL top hitse value%identityAlignment
A0A6J1D1L0 uncharacterized protein LOC1110161988.2e-0535.07Show/hide
Query:  GRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIA---DIKEKTRRTNAL---LKDEVLKDNKDGEEEEIKLL--------SDR----KFEQS
        GRALI+V     T+ V DQQV F + N +K P D + C ++    D++ +  +T  L   L++E+ K  ++ +E+E KL+        SDR     FE S
Subjt:  GRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIA---DIKEKTRRTNAL---LKDEVLKDNKDGEEEEIKLL--------SDR----KFEQS

Query:  DRSNRSTAKIKLLLEEPSTHELETRPTHPKYAHL
        +  +R  A ++  +E+ S  EL+  PTH KYA+L
Subjt:  DRSNRSTAKIKLLLEEPSTHELETRPTHPKYAHL

A0A6J1DDS7 uncharacterized protein LOC1110195992.8e-0549.21Show/hide
Query:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIK
        + T+ +QA ++RNLE+Q+GQ+A +LKSR   AL S  +VP  + KEQC  +TL  GKT PT +
Subjt:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIK

A0A6J1DTD1 uncharacterized protein LOC1110241362.2e-0551.61Show/hide
Query:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTI
        +AT+  Q + +RNLE+QVGQ+A +L SR  GAL S TEVP  + KEQC+ +TL  GK  P +
Subjt:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTI

A0A6J1DWK1 uncharacterized protein LOC1110250532.2e-0538Show/hide
Query:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIKQDQRTQGNSQPLNSPTTSQPTQSNTAPGRALINVQEE
        +AT+ +QA ++RNLE+QVGQ+A +LKSR  GAL S TEVP  + KEQC  +TL  GK  P    +  T    +P         ++ ++ P   ++ +  E
Subjt:  EATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIKQDQRTQGNSQPLNSPTTSQPTQSNTAPGRALINVQEE

A0A6J1DXK5 uncharacterized protein LOC1110255003.9e-0741.82Show/hide
Query:  RTIRVGGTTLTSNGVEISNKCRGLSNSCREATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIKQDQRTQGN
        RT   GGT LT   VEI  +         + T+ +QA ++RNLE+QVGQ+A +LKS+ +G L S  +VP  + KEQC  +TL  GKT PT   +   QG 
Subjt:  RTIRVGGTTLTSNGVEISNKCRGLSNSCREATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIKQDQRTQGN

Query:  SQPLNSPTTS
         + LN    S
Subjt:  SQPLNSPTTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAAACGTACAATCCGGGTTGGAGGAACCACCCTAACTTCGAATGGAGTGGAAATCAGCAACAAATGCAGGGGGCTGAGCAACAGCTGTAGAGAGGCAACCCTCCT
GAATCAAGCCACCGCAATTAGGAACTTGGAAGTTCAAGTGGGTCAAATTGCGGGTGAGCTCAAGAGTCGAACACAAGGAGCATTGCTAAGTACGACCGAAGTTCCAAGTG
GGAACATAAAAGAACAATGTCAAGATGTGACATTGATACGTGGGAAAACTAATCCCACTATTAAGCAAGATCAGAGAACGCAAGGAAATTCGCAACCTCTAAATTCTCCA
ACAACGAGTCAACCGACGCAGAGTAATACCGCTCCTGGACGCGCCCTGATTAATGTCCAAGAAGAAATATCAACAATTCTCGTGGGTGATCAACAGGTAAAATTTAATGT
GGTTAACGAATTGAAAGATCCTGATGACTTTCAATCTTGTCAGATGATCGCGGATATCAAGGAGAAGACAAGACGGACAAACGCATTGTTGAAAGATGAAGTCCTCAAAG
ACAATAAAGATGGTGAAGAGGAAGAAATCAAGTTACTCTCTGATCGTAAATTTGAGCAATCAGACCGGAGCAACAGATCCACTGCAAAGATTAAGCTGTTATTAGAAGAG
CCTTCAACGCATGAGCTAGAAACCAGACCAACGCATCCCAAGTACGCGCACTTGAGGGAGATCATGCTGCAATTCATTGTCTCCTCTGCATTGAACCCTGAATGCGATAA
AGGCTCCATTGACCCACGCAAGCATAATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAAACGTACAATCCGGGTTGGAGGAACCACCCTAACTTCGAATGGAGTGGAAATCAGCAACAAATGCAGGGGGCTGAGCAACAGCTGTAGAGAGGCAACCCTCCT
GAATCAAGCCACCGCAATTAGGAACTTGGAAGTTCAAGTGGGTCAAATTGCGGGTGAGCTCAAGAGTCGAACACAAGGAGCATTGCTAAGTACGACCGAAGTTCCAAGTG
GGAACATAAAAGAACAATGTCAAGATGTGACATTGATACGTGGGAAAACTAATCCCACTATTAAGCAAGATCAGAGAACGCAAGGAAATTCGCAACCTCTAAATTCTCCA
ACAACGAGTCAACCGACGCAGAGTAATACCGCTCCTGGACGCGCCCTGATTAATGTCCAAGAAGAAATATCAACAATTCTCGTGGGTGATCAACAGGTAAAATTTAATGT
GGTTAACGAATTGAAAGATCCTGATGACTTTCAATCTTGTCAGATGATCGCGGATATCAAGGAGAAGACAAGACGGACAAACGCATTGTTGAAAGATGAAGTCCTCAAAG
ACAATAAAGATGGTGAAGAGGAAGAAATCAAGTTACTCTCTGATCGTAAATTTGAGCAATCAGACCGGAGCAACAGATCCACTGCAAAGATTAAGCTGTTATTAGAAGAG
CCTTCAACGCATGAGCTAGAAACCAGACCAACGCATCCCAAGTACGCGCACTTGAGGGAGATCATGCTGCAATTCATTGTCTCCTCTGCATTGAACCCTGAATGCGATAA
AGGCTCCATTGACCCACGCAAGCATAATAACTAA
Protein sequenceShow/hide protein sequence
MVKRTIRVGGTTLTSNGVEISNKCRGLSNSCREATLLNQATAIRNLEVQVGQIAGELKSRTQGALLSTTEVPSGNIKEQCQDVTLIRGKTNPTIKQDQRTQGNSQPLNSP
TTSQPTQSNTAPGRALINVQEEISTILVGDQQVKFNVVNELKDPDDFQSCQMIADIKEKTRRTNALLKDEVLKDNKDGEEEEIKLLSDRKFEQSDRSNRSTAKIKLLLEE
PSTHELETRPTHPKYAHLREIMLQFIVSSALNPECDKGSIDPRKHNN