; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G03590 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G03590
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:11345478..11346328
RNA-Seq ExpressionClc04G03590
SyntenyClc04G03590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833181.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.6e-1439.83Show/hide
Query:  KGRRKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIES
        K R+K +  +  EV FFPE   LP +II  +D   WR FC     IQP  V++FY G I  +  +V VE   + F  +EINA+F L +    E NR++ +
Subjt:  KGRRKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIES

Query:  TTPEYMQDTLRVMAKPRS
         T   M D L ++AKP S
Subjt:  TTPEYMQDTLRVMAKPRS

XP_038896288.1 disease resistance protein RGA2-like [Benincasa hispida]1.1e-2043.22Show/hide
Query:  KGRRKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIES
        KGR++ F DIL+E   FP+  PLP YI + I+  GW  FC G   I P LV++FYN   D E +   VEG  V F+A + N +F + ++P+ E NR++E 
Subjt:  KGRRKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIES

Query:  TTPEYMQDTLRVMAKPRS
         TP  ++DTL+ + KP S
Subjt:  TTPEYMQDTLRVMAKPRS

XP_038896576.1 protein PXR1-like [Benincasa hispida]1.5e-0943.84Show/hide
Query:  SWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPEYMQDTLRVMAKP
        S I P++V+SFY GR+    D V  +G  V FNA++IN I+Q++DDP+   N++I+  T E M+D +RV+ +P
Subjt:  SWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPEYMQDTLRVMAKP

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]4.4e-1739.47Show/hide
Query:  RRKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTT
        +RK   D+L+E+ F+P   PLP  I  II  HGW  F    S I P++V  FY G + E  D V  +G  V F+ + IN ++Q+RD+P+   N++I+  T
Subjt:  RRKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTT

Query:  PEYMQDTLRVMAKP
         E M++ L+V+A+P
Subjt:  PEYMQDTLRVMAKP

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.6e-1433.81Show/hide
Query:  RKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTP
        +K   D++ME+ F P   PLP +   ++  HGW  F    S I P +V++FY GR+   +D V+++G  VPF+AR+IN +++++D P+   N++I+    
Subjt:  RKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTP

Query:  EYMQDTLRVMAKPRSGSPNNARQNSIKGSSDGNILHYAR
        E M+D LR +   +SG+  +     IK  +   +L  AR
Subjt:  EYMQDTLRVMAKPRSGSPNNARQNSIKGSSDGNILHYAR

TrEMBL top hitse value%identityAlignment
A0A2P5A7C9 Uncharacterized protein9.2e-0535.44Show/hide
Query:  YIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPE
        ++  +I+ H WR FC         LV+ FY    D EED V V G +VP++   INA++ L D  +  S  + + T PE
Subjt:  YIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPE

A0A2P5B0K0 Uncharacterized protein1.1e-0534.07Show/hide
Query:  PPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPEYMQDTLRVMA
        PP+I D+I  H W+ FC     +   LV+ FY    + ++D V V G +VP +A  IN I+ L  DP  E +  +E+ T   +   L  +A
Subjt:  PPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPEYMQDTLRVMA

A0A2P5CYU1 Uncharacterized protein (Fragment)9.2e-0543.08Show/hide
Query:  PPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRD
        PP+I+D+I  H W+ FCT        LV+ FY    + EED V V G +VP +   IN IF L D
Subjt:  PPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRD

A0A2P5E5V1 Uncharacterized protein3.2e-0541.54Show/hide
Query:  PPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRD
        PP+I+D+I  H W+ FC         LV  FY    D EED+V V G +VP +   IN +F L D
Subjt:  PPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRD

A0A2P5EK98 Uncharacterized protein (Fragment)1.2e-0434.44Show/hide
Query:  PYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPEYMQDTLRVMA
        P+I  +I+ H WR FC         LV+ FY    D EED V V G +VP+    IN +F L  DP  E +  +   T + +   L  +A
Subjt:  PYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPEYMQDTLRVMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAAAAGGGAGACGCAAGATGTTCCCTGACATACTGATGGAGGTCGCCTTTTTCCCAGAGGAAGCCCCACTTCCACCATACATCATAGACATCATCGATCACCA
CGGCTGGCGGAACTTCTGTACCGGCTCATCTTGGATTCAACCTGAGTTAGTGCAGAGTTTCTACAATGGACGCATTGATGAAGAGGAAGATATGGTGGTAGTTGAGGGAA
GTGAAGTCCCATTCAACGCAAGGGAAATCAATGCCATATTTCAGTTGAGGGACGACCCAAACACAGAGAGCAACAGGCTCATTGAATCGACAACTCCTGAATACATGCAA
GACACTCTGCGGGTCATGGCCAAGCCAAGAAGCGGCTCACCCAACAACGCAAGGCAAAACAGTATCAAGGGATCGAGTGATGGCAACATATTGCATTATGCGAGGCATCC
ATCTGGACGTCAGACGCATAATAGTAGCTCAGATCAGAGGCGTCTTCAAAGTGATAAGGAAGTGTTAGACGTAGCTCATATGTTGGAGGTGAATAGTGTTATCGCCAACA
AAACTCTGCATCGGCTTATGAGAGGATCACAACATCAACTAGAGCCCACCAAGGCCACCAAAGGATCTCATCACCCAGCACCCACAGCTGATCACTTTCAAAGCCGTCAA
AAAGGAAAGAAAAGGGGAAGTCATTTAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAAAAGGGAGACGCAAGATGTTCCCTGACATACTGATGGAGGTCGCCTTTTTCCCAGAGGAAGCCCCACTTCCACCATACATCATAGACATCATCGATCACCA
CGGCTGGCGGAACTTCTGTACCGGCTCATCTTGGATTCAACCTGAGTTAGTGCAGAGTTTCTACAATGGACGCATTGATGAAGAGGAAGATATGGTGGTAGTTGAGGGAA
GTGAAGTCCCATTCAACGCAAGGGAAATCAATGCCATATTTCAGTTGAGGGACGACCCAAACACAGAGAGCAACAGGCTCATTGAATCGACAACTCCTGAATACATGCAA
GACACTCTGCGGGTCATGGCCAAGCCAAGAAGCGGCTCACCCAACAACGCAAGGCAAAACAGTATCAAGGGATCGAGTGATGGCAACATATTGCATTATGCGAGGCATCC
ATCTGGACGTCAGACGCATAATAGTAGCTCAGATCAGAGGCGTCTTCAAAGTGATAAGGAAGTGTTAGACGTAGCTCATATGTTGGAGGTGAATAGTGTTATCGCCAACA
AAACTCTGCATCGGCTTATGAGAGGATCACAACATCAACTAGAGCCCACCAAGGCCACCAAAGGATCTCATCACCCAGCACCCACAGCTGATCACTTTCAAAGCCGTCAA
AAAGGAAAGAAAAGGGGAAGTCATTTAAGTTGA
Protein sequenceShow/hide protein sequence
MDGKGRRKMFPDILMEVAFFPEEAPLPPYIIDIIDHHGWRNFCTGSSWIQPELVQSFYNGRIDEEEDMVVVEGSEVPFNAREINAIFQLRDDPNTESNRLIESTTPEYMQ
DTLRVMAKPRSGSPNNARQNSIKGSSDGNILHYARHPSGRQTHNSSSDQRRLQSDKEVLDVAHMLEVNSVIANKTLHRLMRGSQHQLEPTKATKGSHHPAPTADHFQSRQ
KGKKRGSHLS