; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G03865 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G03865
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionReverse transcriptase
Genome locationClcChr04:12866949..12868076
RNA-Seq ExpressionClc04G03865
SyntenyClc04G03865
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039476.1 uncharacterized protein E6C27_scaffold64G002900 [Cucumis melo var. makuwa]2.5e-8654.6Show/hide
Query:  GDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLLQKG
        G M  G    HP AE        +  A+  A   G S +SDP+KKY +ERLKALGATTF GT  P + E WL L+EKC+RV RCPEDRKVELA FLLQ G
Subjt:  GDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLLQKG

Query:  AEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTASVEW
        AEDWW++ ESRR  T  I W+EFKK F +K+ PRSFRDAKRNEFLRL QGSMTVAEYEKKYTELSKYAT VI DE +R KRFEEGLREEIRT VTA  +W
Subjt:  AEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTASVEW

Query:  MDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGSRSG
         DFS LVEAA+RV KSL E+K ER++SK+ R     +H + +   +SG RFVPGV   GNFK++ +G + F  S SGG   Q       P  S+ GS   
Subjt:  MDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGSRSG

Query:  RPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
        R     + S                C+ + CYNCGQ  H++R+CP L+
Subjt:  RPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]6.3e-9054.7Show/hide
Query:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL
        G  G M +G    HP AE        +  A+  A   G S +SDPEKKY +ERLKALGATTF GT  P +AE WL L+EKC+RV RCPEDRKVELA FLL
Subjt:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL

Query:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS
        Q GAEDWW++ ESRR  T  I WNEFKK F +K+ PRSFRDAKRNEFLRL QGSMT+AEYEKKYTELS YAT VI DE +RCKRFEEGLREEIRTPVTA 
Subjt:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS

Query:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS
         +W DFS LVEAA+RVEKSL E+K ER++SK+     SS +   + G+    RFVPGV   GNFK++ +G +  K+ +SGG   Q       P  S  GS
Subjt:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS

Query:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
           R     + S++                 + CYNCGQ  H++R+CP L+
Subjt:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.4e-8147.61Show/hide
Query:  MPPR-GRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCY
        MPPR GRR RQ   G    T      S GESS          + F R  Q +  +  +  SDPEK Y +ERLK LGAT FEG+ +P +AE WLN+LEKC+
Subjt:  MPPR-GRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCY

Query:  RVMRCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRC
         VM CPE+RKV LA FLLQK AE WWK + +RR D   +DW  F+ +F++KY P ++ +AKR+EFL L QGS++VAEYE+KYTELS+YA  +IA E+DRC
Subjt:  RVMRCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRC

Query:  KRFEEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGRRFVPG--VFKGGNFKTKSSGQTTFKTSTSGGIRG
        +RFE GLR EIRTPVTA  +W +FS LVE A+RVE+S+ E+K   + S+      +SG   G+  RRF PG  +    +FK +S GQ +   S     + 
Subjt:  KRFEEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGRRFVPG--VFKGGNFKTKSSGQTTFKTSTSGGIRG

Query:  QGPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTSHFKRECPQLMQEDKPDQ
        Q  +    P +S   S+ G+  ES AS+ ++  C +CG+ H GQC V A  CY CGQ  HFK++CPQL    + DQ
Subjt:  QGPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTSHFKRECPQLMQEDKPDQ

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]3.1e-8953.01Show/hide
Query:  PRGRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVM
        PR     +A     EA    G+ S+ ESS P+ E NVEEQL  R+AQRL + I S +SDPEKKY  ERLKALGATTF GT  P + E WL L+EKC+RV 
Subjt:  PRGRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVM

Query:  RCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRF
        R  EDRKVELA FLLQ  AEDWW++ ESRR  T  + W+EFKK F +K+ PRSFRDAK NEF+RL QG+MTVAEYEKKYTELSKYAT VI DE +RCKRF
Subjt:  RCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRF

Query:  EEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQ
        EEGLREEIRTPVTA  +W DFS LVE A+RVEKSL E+K ER++SK+ R   SS +   + G+    RFVP V   G+FK++ SG +  K+ + GG   Q
Subjt:  EEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQ

Query:  GPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
           +      S  GS   R     + S +                 + CYNC Q  H++R+CP L+
Subjt:  GPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

TYK15233.1 uncharacterized protein E5676_scaffold892G00030 [Cucumis melo var. makuwa]1.9e-8654.42Show/hide
Query:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL
        G  G M  G    HP AE        +  A+  A   G S +SDP+KKY +ERLKALGATTF GT  P + E WL L+EKC+RV RCPEDRKVELA FLL
Subjt:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL

Query:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS
        Q GAEDWW++ ESRR  T  I W+EFKK F +K+ PRSFRDAKRNEFLRL QGSMTVAEYEKKYTELSKYAT VI DE +R KRFEEGLREEIRT VTA 
Subjt:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS

Query:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS
         +W DFS LVEAA+RV KSL E+K ER++SK+ R     +H + +   +SG RFVPGV   GNFK++ +G + F  S SGG   Q       P  S+ GS
Subjt:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS

Query:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
           R     + S                C+ + CYNCGQ  H++R+CP L+
Subjt:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

TrEMBL top hitse value%identityAlignment
A0A5A7TBS0 CCHC-type domain-containing protein1.2e-8654.6Show/hide
Query:  GDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLLQKG
        G M  G    HP AE        +  A+  A   G S +SDP+KKY +ERLKALGATTF GT  P + E WL L+EKC+RV RCPEDRKVELA FLLQ G
Subjt:  GDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLLQKG

Query:  AEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTASVEW
        AEDWW++ ESRR  T  I W+EFKK F +K+ PRSFRDAKRNEFLRL QGSMTVAEYEKKYTELSKYAT VI DE +R KRFEEGLREEIRT VTA  +W
Subjt:  AEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTASVEW

Query:  MDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGSRSG
         DFS LVEAA+RV KSL E+K ER++SK+ R     +H + +   +SG RFVPGV   GNFK++ +G + F  S SGG   Q       P  S+ GS   
Subjt:  MDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGSRSG

Query:  RPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
        R     + S                C+ + CYNCGQ  H++R+CP L+
Subjt:  RPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

A0A5A7U2V7 Reverse transcriptase1.2e-8147.61Show/hide
Query:  MPPR-GRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCY
        MPPR GRR RQ   G    T      S GESS          + F R  Q +  +  +  SDPEK Y +ERLK LGAT FEG+ +P +AE WLN+LEKC+
Subjt:  MPPR-GRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCY

Query:  RVMRCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRC
         VM CPE+RKV LA FLLQK AE WWK + +RR D   +DW  F+ +F++KY P ++ +AKR+EFL L QGS++VAEYE+KYTELS+YA  +IA E+DRC
Subjt:  RVMRCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRC

Query:  KRFEEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGRRFVPG--VFKGGNFKTKSSGQTTFKTSTSGGIRG
        +RFE GLR EIRTPVTA  +W +FS LVE A+RVE+S+ E+K   + S+      +SG   G+  RRF PG  +    +FK +S GQ +   S     + 
Subjt:  KRFEEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGRRFVPG--VFKGGNFKTKSSGQTTFKTSTSGGIRG

Query:  QGPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTSHFKRECPQLMQEDKPDQ
        Q  +    P +S   S+ G+  ES AS+ ++  C +CG+ H GQC V A  CY CGQ  HFK++CPQL    + DQ
Subjt:  QGPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTSHFKRECPQLMQEDKPDQ

A0A5A7UZM6 Gag protease polyprotein-like protein3.1e-9054.7Show/hide
Query:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL
        G  G M +G    HP AE        +  A+  A   G S +SDPEKKY +ERLKALGATTF GT  P +AE WL L+EKC+RV RCPEDRKVELA FLL
Subjt:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL

Query:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS
        Q GAEDWW++ ESRR  T  I WNEFKK F +K+ PRSFRDAKRNEFLRL QGSMT+AEYEKKYTELS YAT VI DE +RCKRFEEGLREEIRTPVTA 
Subjt:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS

Query:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS
         +W DFS LVEAA+RVEKSL E+K ER++SK+     SS +   + G+    RFVPGV   GNFK++ +G +  K+ +SGG   Q       P  S  GS
Subjt:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS

Query:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
           R     + S++                 + CYNCGQ  H++R+CP L+
Subjt:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

A0A5D3BB91 Reverse transcriptase1.5e-8953.01Show/hide
Query:  PRGRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVM
        PR     +A     EA    G+ S+ ESS P+ E NVEEQL  R+AQRL + I S +SDPEKKY  ERLKALGATTF GT  P + E WL L+EKC+RV 
Subjt:  PRGRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVM

Query:  RCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRF
        R  EDRKVELA FLLQ  AEDWW++ ESRR  T  + W+EFKK F +K+ PRSFRDAK NEF+RL QG+MTVAEYEKKYTELSKYAT VI DE +RCKRF
Subjt:  RCPEDRKVELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRF

Query:  EEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQ
        EEGLREEIRTPVTA  +W DFS LVE A+RVEKSL E+K ER++SK+ R   SS +   + G+    RFVP V   G+FK++ SG +  K+ + GG   Q
Subjt:  EEGLREEIRTPVTASVEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGR----RFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQ

Query:  GPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
           +      S  GS   R     + S +                 + CYNC Q  H++R+CP L+
Subjt:  GPKNVGGPAQSVEGSRSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

A0A5D3CTK6 CCHC-type domain-containing protein9.2e-8754.42Show/hide
Query:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL
        G  G M  G    HP AE        +  A+  A   G S +SDP+KKY +ERLKALGATTF GT  P + E WL L+EKC+RV RCPEDRKVELA FLL
Subjt:  GNHGDMSEGE-SSHPQAEVNVEEQLFTRIAQRLAASIG-SVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKVELAVFLL

Query:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS
        Q GAEDWW++ ESRR  T  I W+EFKK F +K+ PRSFRDAKRNEFLRL QGSMTVAEYEKKYTELSKYAT VI DE +R KRFEEGLREEIRT VTA 
Subjt:  QKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTAS

Query:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS
         +W DFS LVEAA+RV KSL E+K ER++SK+ R     +H + +   +SG RFVPGV   GNFK++ +G + F  S SGG   Q       P  S+ GS
Subjt:  VEWMDFSSLVEAAMRVEKSLMEKKIERDSSKSERV----VHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGS

Query:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM
           R     + S                C+ + CYNCGQ  H++R+CP L+
Subjt:  RSGRPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCTCGAGGCAGGCGAGCTAGGCAAGCAGTAGTCGGAACTCCTGAAGCTACTGGGAACCATGGAGATATGTCTGAGGGTGAATCTAGTCATCCTCAAGCTGAGGT
CAATGTCGAGGAACAACTATTTACTAGAATTGCCCAGAGACTGGCTGCAAGTATCGGATCAGTGGAATCCGATCCAGAAAAGAAATATAGTGTTGAAAGATTAAAGGCTT
TAGGTGCTACTACTTTTGAGGGCACCGTGGAACCTGTTGAGGCAGAAACATGGCTAAATTTGCTCGAGAAATGCTATCGTGTAATGAGATGCCCCGAAGACAGAAAAGTG
GAGTTGGCAGTATTCTTGCTCCAAAAAGGGGCAGAAGATTGGTGGAAGATTGTGGAAAGCAGAAGAGGAGACACAGAAGGAATAGACTGGAATGAGTTTAAGAAGGTTTT
CCAAGAAAAATATTGTCCAAGATCATTCCGAGATGCTAAACGGAATGAGTTTTTGAGGTTGATACAGGGATCTATGACAGTGGCAGAATATGAAAAGAAATATACAGAAC
TGTCTAAATATGCCACGACGGTTATTGCAGATGAGACTGATCGATGTAAGAGGTTTGAAGAAGGGTTACGGGAGGAAATACGAACTCCAGTAACCGCCAGTGTTGAATGG
ATGGATTTTTCTAGCCTAGTGGAGGCAGCTATGCGGGTAGAAAAGAGTTTGATGGAGAAGAAGATAGAGCGTGATTCATCTAAAAGTGAACGTGTAGTCCACTCTTCTGG
CGTTACTCTGGGACAATCAGGAAGGAGATTTGTACCTGGCGTGTTTAAAGGAGGAAACTTCAAAACTAAATCGAGCGGACAGACTACTTTTAAGACCAGTACTAGTGGAG
GTATACGGGGGCAAGGACCAAAGAACGTTGGTGGTCCAGCGCAGTCAGTAGAAGGTTCTCGAAGTGGACGACCTGGTGAGTCCACAGCTAGTTCCACACAGAAACCACTG
TGTCCCACCTGCGGGAAGTATCATTGGGGACAGTGTAGGGTCAATGCATGTTATAACTGTGGACAGACTAGTCATTTCAAACGAGAATGCCCTCAATTGATGCAAGAAGA
TAAACCTGACCAGAGAACCAGTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACCTCGAGGCAGGCGAGCTAGGCAAGCAGTAGTCGGAACTCCTGAAGCTACTGGGAACCATGGAGATATGTCTGAGGGTGAATCTAGTCATCCTCAAGCTGAGGT
CAATGTCGAGGAACAACTATTTACTAGAATTGCCCAGAGACTGGCTGCAAGTATCGGATCAGTGGAATCCGATCCAGAAAAGAAATATAGTGTTGAAAGATTAAAGGCTT
TAGGTGCTACTACTTTTGAGGGCACCGTGGAACCTGTTGAGGCAGAAACATGGCTAAATTTGCTCGAGAAATGCTATCGTGTAATGAGATGCCCCGAAGACAGAAAAGTG
GAGTTGGCAGTATTCTTGCTCCAAAAAGGGGCAGAAGATTGGTGGAAGATTGTGGAAAGCAGAAGAGGAGACACAGAAGGAATAGACTGGAATGAGTTTAAGAAGGTTTT
CCAAGAAAAATATTGTCCAAGATCATTCCGAGATGCTAAACGGAATGAGTTTTTGAGGTTGATACAGGGATCTATGACAGTGGCAGAATATGAAAAGAAATATACAGAAC
TGTCTAAATATGCCACGACGGTTATTGCAGATGAGACTGATCGATGTAAGAGGTTTGAAGAAGGGTTACGGGAGGAAATACGAACTCCAGTAACCGCCAGTGTTGAATGG
ATGGATTTTTCTAGCCTAGTGGAGGCAGCTATGCGGGTAGAAAAGAGTTTGATGGAGAAGAAGATAGAGCGTGATTCATCTAAAAGTGAACGTGTAGTCCACTCTTCTGG
CGTTACTCTGGGACAATCAGGAAGGAGATTTGTACCTGGCGTGTTTAAAGGAGGAAACTTCAAAACTAAATCGAGCGGACAGACTACTTTTAAGACCAGTACTAGTGGAG
GTATACGGGGGCAAGGACCAAAGAACGTTGGTGGTCCAGCGCAGTCAGTAGAAGGTTCTCGAAGTGGACGACCTGGTGAGTCCACAGCTAGTTCCACACAGAAACCACTG
TGTCCCACCTGCGGGAAGTATCATTGGGGACAGTGTAGGGTCAATGCATGTTATAACTGTGGACAGACTAGTCATTTCAAACGAGAATGCCCTCAATTGATGCAAGAAGA
TAAACCTGACCAGAGAACCAGTCCCTAG
Protein sequenceShow/hide protein sequence
MPPRGRRARQAVVGTPEATGNHGDMSEGESSHPQAEVNVEEQLFTRIAQRLAASIGSVESDPEKKYSVERLKALGATTFEGTVEPVEAETWLNLLEKCYRVMRCPEDRKV
ELAVFLLQKGAEDWWKIVESRRGDTEGIDWNEFKKVFQEKYCPRSFRDAKRNEFLRLIQGSMTVAEYEKKYTELSKYATTVIADETDRCKRFEEGLREEIRTPVTASVEW
MDFSSLVEAAMRVEKSLMEKKIERDSSKSERVVHSSGVTLGQSGRRFVPGVFKGGNFKTKSSGQTTFKTSTSGGIRGQGPKNVGGPAQSVEGSRSGRPGESTASSTQKPL
CPTCGKYHWGQCRVNACYNCGQTSHFKRECPQLMQEDKPDQRTSP