; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G04215 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04215
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF4283 domain-containing protein
Genome locationClcChr04:14582043..14582439
RNA-Seq ExpressionClc04G04215
SyntenyClc04G04215
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042316.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.9e-1145.65Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL        L +TPPK +GD +VV P E+V+  G  +WENSLVG+       +V++H L   IWGK+EM TIT+++  LI FQF  A+S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES

KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]4.5e-1344.57Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL      + LL+T PK++GD +VV P EKV++ G  +WENSLVGQ         V+ H +  IWGK+EM  IT+++  LI FQF +++S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES

KAA0049771.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]8.5e-1244.57Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL        LL+T PK +GD +VV P E+V++ G  +WENSLVGQ       + ++ CL   IWGK+EMS IT+++  LI FQF + +S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]1.3e-1243.48Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EM  IT+++  LI FQF +++S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]1.3e-1243.48Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EM  IT+++  LI FQF +++S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES

TrEMBL top hitse value%identityAlignment
A0A1S3CJ11 uncharacterized protein LOC1035013956.4e-1343.48Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EM  IT+++  LI FQF +++S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES

A0A1S4E4L1 uncharacterized protein LOC1035021979.2e-1245.65Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL        L +TPPK +GD +VV P E+V+  G  +WENSLVG+       +V++H L   IWGK+EM TIT+++  LI FQF  A+S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES

A0A5A7TWG5 Reverse transcriptase domain-containing protein2.2e-1344.57Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL      + LL+T PK++GD +VV P EKV++ G  +WENSLVGQ         V+ H +  IWGK+EM  IT+++  LI FQF +++S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES

A0A5A7U851 DUF4283 domain-containing protein4.1e-1244.57Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL        LL+T PK +GD +VV P E+V++ G  +WENSLVGQ       + ++ CL   IWGK+EMS IT+++  LI FQF + +S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMSTITLMKTGLIIFQFCKAES

A0A5D3D5X6 Reverse transcriptase domain-containing protein6.4e-1343.48Show/hide
Query:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES
        W+SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EM  IT+++  LI FQF +++S
Subjt:  WSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMSTITLMKTGLIIFQFCKAES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTTGGCGTTCGGTCCCGATGAATCAAGTGGGGTCCATAAGTTGCCGTCTGGGTCTCGCCTATTTAGGGTTGGTTCATGTCATGATGAAAGTCGGTCAACATTG
GTCCTCCCTATTGTGTGCTCCGAAGTCTGATGAGTTGTTGTTTACTCCGCCTAAGATGGTGGGAGATGTGGTGGTAGTTGAACCATCTGAGAAGGTGCTAAATGTGGGGT
GTAGTCTATGGGAGAATTCTTTGGTTGGTCAATTTGTGATGCTACATTGTCTTACCCATATATGGGGTAAGGTTGAGATGTCGACGATTACTTTAATGAAAACTGGCCTT
ATTATTTTCCAATTCTGCAAGGCGGAGTCAAGGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTTGGCGTTCGGTCCCGATGAATCAAGTGGGGTCCATAAGTTGCCGTCTGGGTCTCGCCTATTTAGGGTTGGTTCATGTCATGATGAAAGTCGGTCAACATTG
GTCCTCCCTATTGTGTGCTCCGAAGTCTGATGAGTTGTTGTTTACTCCGCCTAAGATGGTGGGAGATGTGGTGGTAGTTGAACCATCTGAGAAGGTGCTAAATGTGGGGT
GTAGTCTATGGGAGAATTCTTTGGTTGGTCAATTTGTGATGCTACATTGTCTTACCCATATATGGGGTAAGGTTGAGATGTCGACGATTACTTTAATGAAAACTGGCCTT
ATTATTTTCCAATTCTGCAAGGCGGAGTCAAGGGACTAG
Protein sequenceShow/hide protein sequence
MGCWRSVPMNQVGSISCRLGLAYLGLVHVMMKVGQHWSSLLCAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQFVMLHCLTHIWGKVEMSTITLMKTGL
IIFQFCKAESRD