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Clc04G04440 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04440
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationClcChr04:15315964..15317576
RNA-Seq ExpressionClc04G04440
SyntenyClc04G04440
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047586.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.0e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDL  L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++TKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
KAA0050146.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.0e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++ KSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
TYK06402.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.0e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++ KSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
XP_016901398.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]7.0e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDL  L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++TKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
XP_022158189.1 uncharacterized protein LOC111024722 [Momordica charantia]2.0e-1565.33Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+I++ P  IF+N A+YL DLL  SGM + KSC TPMST+IDLHASTP+F +A+LY +LV SL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
TrEMBL top hitse value%identityAlignment
A0A1S4DZJ0 uncharacterized mitochondrial protein AtMg00810-like3.4e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDL  L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++TKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
A0A5A7TWG2 Putative mitochondrial protein9.9e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF N AKYL+DLL TSGM++TK C+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
A0A5A7U7J4 Putative mitochondrial protein3.4e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++ KSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
A0A5D3C579 Putative mitochondrial protein3.4e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++ KSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
A0A5D3CD24 Putative mitochondrial protein3.4e-1662.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDL  L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++TKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
SwissProt top hitse value%identityAlignment
P92519 Uncharacterized mitochondrial protein AtMg008108.1e-0734.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        + DLG + YFLG+ I+T+P G+F++  KY   +L  +GM   K   TP+   ++   ST  +P+ + +  +VG+L
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
Arabidopsis top hitse value%identityAlignment
ATMG00810.1 DNA/RNA polymerases superfamily protein5.8e-0834.67Show/hide
Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        + DLG + YFLG+ I+T+P G+F++  KY   +L  +GM   K   TP+   ++   ST  +P+ + +  +VG+L
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATTATAGGAAATTGTTTACATGTCTCAGCTTGTTGGCTTTGTTAACAAAACTTGCCCACATCTTGTTTGTTTGCTCTACAAAAGTCTACATGGACTTAAACAA
GCACTACAACTTGATTTCTGACCTTGGACGACTTTACTTCCTCGGGCTTGATATACAGACGAACCCTGAAGGTATTTTTATGAACCACGCTAAGTATCTTCATGATCTCC
TTCAAACCTCTGGCATGTCAGCTACTAAGTCTTGCCTTACACCCATGTCCACAACAATTGACCTTCATGCTTCGACTCCGTTATTTCCTAATGCTACTTTATATTGGAAG
CTTGTGGGATCTTTATAG
mRNA sequenceShow/hide mRNA sequence
CCTGAACAAAATGGTGTTGCTGAATGTAAGCATCAGCACATCGTCGAAACGGCAATGTCCTTAATCAGTCATTCCTCTGTTTCCCTTGAAGTTTGGCCCAATACTTTCTT
TAGGGCTGTCTTTCTTCCTCAATCTTTACCTATTTCCACAACTTTCCCCTCCATTTTGACTACTACAATTTAAACCAGAGAATCTTTACCACATGTCTCTAAGTTTAATA
TGTAGGTATTTCCCACAGACGTTAAACCCACAATGGTTGTTTTCCCTCCATTATCGTCATCACTACCTTCAACCAATACTACTTTACCTACACAACTCAAACCTACACCA
ATTTCACTCTTTATTATTAGCCCTATCCTTGTCTCCCAACCCTTCCCTCTAACCAATGTCCATATCCTGCAAACCTGATCCAAATCTGGAATCTTTAAGCCAATAAACTT
GACCTTTCATGCCTACACCTCTACTTCAACTAATTATGTATCTTATACTGAGGCCTGCAAGTTTCCACACTGGCGTGCTACTATGGCCTCAAAGTTTAATGCGCTTCAAG
AGAAAGGCACTTGGTCTCTAGTCCCCAAATCACCTGATATAAATGTGGTTGGATGCAAGTGGGTGTTTCGCACCAAATATAATGTTGATGGATCTGTTGATCAATACAAA
ACTCATCTTGTAGCTAAAGGATATCATCAGATTGAAGGTTTCAACTTCTCAGAAATGTTTAGTCTGGTAGTTAAAAAGCCTACCATTCGGGTATTCTTAATCTTGTTCCA
TGGTTCACATGACCCTTACATCAAATGGATGTAAGAAATGCCTTCTTAGATGGCCAATTATAGGAAATTGTTTACATGTCTCAGCTTGTTGGCTTTGTTAACAAAACTTG
CCCACATCTTGTTTGTTTGCTCTACAAAAGTCTACATGGACTTAAACAAGCACTACAACTTGATTTCTGACCTTGGACGACTTTACTTCCTCGGGCTTGATATACAGACG
AACCCTGAAGGTATTTTTATGAACCACGCTAAGTATCTTCATGATCTCCTTCAAACCTCTGGCATGTCAGCTACTAAGTCTTGCCTTACACCCATGTCCACAACAATTGA
CCTTCATGCTTCGACTCCGTTATTTCCTAATGCTACTTTATATTGGAAGCTTGTGGGATCTTTATAGTATCTCACATTTACTCGCCTTGATATTGTCTTTGCTGTCAATC
ATGTCAGTCAGTTCATGCCGCACCTCACAATCAATCACTACACTATTGTAAAACAAATCTTTCGTTATCTCATTGGCATATTCAATCTTGGTTTTTAGTTCAAACCCAAC
AAGCTTTCTCATCAGTCCTTATGTGACGTTGACTGGGCTAGCAATTCCTTTGATCGTCGGTCAACAATTGGGTATGTTGTCCTCCTTGGCTCCTCACCTGTCT
Protein sequenceShow/hide protein sequence
MANYRKLFTCLSLLALLTKLAHILFVCSTKVYMDLNKHYNLISDLGRLYFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSATKSCLTPMSTTIDLHASTPLFPNATLYWK
LVGSL