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Clc04G04450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:15413079..15413315
RNA-Seq ExpressionClc04G04450
SyntenyClc04G04450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34001.1 hypothetical protein [Cucumis melo subsp. melo]2.0e-2284.15Show/hide
Query:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED-DHGDEPKS-LTIQK-ADRSSLILKHQIK-TSSTF
        MAGLQYNFFPTDLLYPKPSSSSSSSEAINRA VTFKT L+GNK EED DHGDE KS L  QK ADRS LILKHQ K TSSTF
Subjt:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED-DHGDEPKS-LTIQK-ADRSSLILKHQIK-TSSTF

KAG6603410.1 hypothetical protein SDJN03_04019, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2372.62Show/hide
Query:  MAGLQYNFFPTDLLYPKP-------SSSSSSSEAINRAGVTFKTPLKGNKAEEDDHGDEPKSLTIQKADRSSLILKHQIKTSST
        MAGLQYNFFPTDLLYPKP       SSSSSSS+AINRA VTFK P++GN+ EEDDHGD  KSL+IQK DRS LILKHQ+K  S+
Subjt:  MAGLQYNFFPTDLLYPKP-------SSSSSSSEAINRAGVTFKTPLKGNKAEEDDHGDEPKSLTIQKADRSSLILKHQIKTSST

KGN53975.1 hypothetical protein Csa_018873 [Cucumis sativus]6.2e-2477.78Show/hide
Query:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED--DHGDEPKS--LTIQKADRSSLILKHQIKTSST
        MAGLQYNFFPTDLLYPKPSSSSSSSEAINRA VTFKTPL+GNK +++  DHGDEPKS  +  QK DRS LILKHQIK++S+
Subjt:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED--DHGDEPKS--LTIQKADRSSLILKHQIKTSST

TrEMBL top hitse value%identityAlignment
A0A0A0KWJ2 Uncharacterized protein3.0e-2477.78Show/hide
Query:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED--DHGDEPKS--LTIQKADRSSLILKHQIKTSST
        MAGLQYNFFPTDLLYPKPSSSSSSSEAINRA VTFKTPL+GNK +++  DHGDEPKS  +  QK DRS LILKHQIK++S+
Subjt:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED--DHGDEPKS--LTIQKADRSSLILKHQIKTSST

A0A5A7V9D3 Uncharacterized protein9.7e-2384.15Show/hide
Query:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED-DHGDEPKS-LTIQK-ADRSSLILKHQIK-TSSTF
        MAGLQYNFFPTDLLYPKPSSSSSSSEAINRA VTFKT L+GNK EED DHGDE KS L  QK ADRS LILKHQ K TSSTF
Subjt:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED-DHGDEPKS-LTIQK-ADRSSLILKHQIK-TSSTF

E5GC02 Uncharacterized protein9.7e-2384.15Show/hide
Query:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED-DHGDEPKS-LTIQK-ADRSSLILKHQIK-TSSTF
        MAGLQYNFFPTDLLYPKPSSSSSSSEAINRA VTFKT L+GNK EED DHGDE KS L  QK ADRS LILKHQ K TSSTF
Subjt:  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEED-DHGDEPKS-LTIQK-ADRSSLILKHQIK-TSSTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTTCAATACAACTTCTTTCCCACTGATCTCCTCTACCCTAAACCCTCTTCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAGGTGTCACCTTCAAAAC
CCCACTAAAAGGCAATAAAGCTGAAGAAGATGATCATGGTGATGAACCCAAGAGCTTGACCATTCAAAAGGCTGATAGATCATCATTGATTCTCAAGCATCAAATCAAGA
CTTCTTCAACTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGCTTCAATACAACTTCTTTCCCACTGATCTCCTCTACCCTAAACCCTCTTCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAGGTGTCACCTTCAAAAC
CCCACTAAAAGGCAATAAAGCTGAAGAAGATGATCATGGTGATGAACCCAAGAGCTTGACCATTCAAAAGGCTGATAGATCATCATTGATTCTCAAGCATCAAATCAAGA
CTTCTTCAACTTTCTAA
Protein sequenceShow/hide protein sequence
MAGLQYNFFPTDLLYPKPSSSSSSSEAINRAGVTFKTPLKGNKAEEDDHGDEPKSLTIQKADRSSLILKHQIKTSSTF