; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G04590 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04590
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBasic helix-loop-helix transcription factor
Genome locationClcChr04:16275065..16278963
RNA-Seq ExpressionClc04G04590
SyntenyClc04G04590
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64266.1 hypothetical protein VITISV_031510 [Vitis vinifera]5.6e-3446.52Show/hide
Query:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS
        WP+E+    EQN I  +  A+E     P  +    P    + S PS  V+ +  +  ++LNHNASERDRRKKIN L+SSLRS+LP+ DQ K+LS P+TVS
Subjt:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS

Query:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG
          LKYIP LQKQVE L++KK +L+  ++          +R+   +S L  VS N LS+RE+VVQ IST+  H  PLS +LL L EDGL  +N SS  SFG
Subjt:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG

Query:  GRIICHLHLQVEKERKQIESKILNDKVLRI
        GR+  +LHLQVE   + +E ++L++K+L +
Subjt:  GRIICHLHLQVEKERKQIESKILNDKVLRI

XP_004513200.2 transcription factor ORG2-like [Cicer arietinum]3.6e-3343.86Show/hide
Query:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK
        WPFEE    N  D           LF+ H   +  ++ S PS   +  DL   ++L HNASERDRRKKIN L+SSLRS+LP  +Q K+LSNPAT+S  LK
Subjt:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK

Query:  YIPNLQKQVEELVEKKRQLMFSMT----------TRRQEESSSCLLTVSTNSLSEREVVVQIIS-TYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRII
        YIP LQKQVE L+ +K  ++  ++          + R++ S +    VST+ L++ E  +QI S + H IPLS IL+ L  DGL  LNISSS +FGG++ 
Subjt:  YIPNLQKQVEELVEKKRQLMFSMT----------TRRQEESSSCLLTVSTNSLSEREVVVQIIS-TYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRII

Query:  CHLHLQVEKERKQIESKILNDKVLRIYD
         + H QV+KE++ +ES+I ++K+L I +
Subjt:  CHLHLQVEKERKQIESKILNDKVLRIYD

XP_010653965.1 PREDICTED: transcription factor ORG2 [Vitis vinifera]5.6e-3446.52Show/hide
Query:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS
        WP+E+    EQN I  +  A+E     P  +    P    + S PS  V+ +  +  ++LNHNASERDRRKKIN L+SSLRS+LP+ DQ K+LS P+TVS
Subjt:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS

Query:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG
          LKYIP LQKQVE L++KK +L+  ++          +R+   +S L  VS N LS+RE+VVQ IST+  H  PLS +LL L EDGL  +N SS  SFG
Subjt:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG

Query:  GRIICHLHLQVEKERKQIESKILNDKVLRI
        GR+  +LHLQVE   + +E ++L++K+L +
Subjt:  GRIICHLHLQVEKERKQIESKILNDKVLRI

XP_024631418.2 transcription factor ORG2 isoform X1 [Medicago truncatula]6.2e-3343.4Show/hide
Query:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK
        WPFEE    N   + +  K+    LF+ H   +E +  S         DL   ++L HNASERDRRKKIN L+SSLRS+LP  DQ K+LS PAT+S  LK
Subjt:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK

Query:  YIPNLQKQVEELVEKKRQLM-----------FSMTTRRQEESSSCLLTVSTNSLSEREVVVQI-ISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRI
        YIP LQ QVE L+++K +++            S  ++R++ S +    VST+ L++ E+ +QI   T H IPLS IL+ L  DGL  LN+SSS +FGGR+
Subjt:  YIPNLQKQVEELVEKKRQLM-----------FSMTTRRQEESSSCLLTVSTNSLSEREVVVQI-ISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRI

Query:  ICHLHLQVEKERKQIESKILNDKVLRIYDNINYLQ
          +LH QV+K  + +ES ILN+K+L + D     Q
Subjt:  ICHLHLQVEKERKQIESKILNDKVLRIYDNINYLQ

XP_038882376.1 transcription factor ORG2-like [Benincasa hispida]1.6e-6082.93Show/hide
Query:  MEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRR-QEES
        MEVDDK   S IV V+DL+ SRRLNHNASER+RR KINLLFSSLRSVLP HDQ KRLSNPATVSVAL YI NLQKQVEELVEKK+QLM SM TRR QEES
Subjt:  MEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRR-QEES

Query:  SSCLLTVSTNSLSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQ
        SS LL VSTNSLSE E +VQIIST+HGIPLSCILLGL EDGLHPLNISSSLSFGGRI  +LHLQ
Subjt:  SSCLLTVSTNSLSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQ

TrEMBL top hitse value%identityAlignment
A0A1S2Z1A2 transcription factor ORG2-like1.8e-3343.86Show/hide
Query:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK
        WPFEE    N  D           LF+ H   +  ++ S PS   +  DL   ++L HNASERDRRKKIN L+SSLRS+LP  +Q K+LSNPAT+S  LK
Subjt:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK

Query:  YIPNLQKQVEELVEKKRQLMFSMT----------TRRQEESSSCLLTVSTNSLSEREVVVQIIS-TYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRII
        YIP LQKQVE L+ +K  ++  ++          + R++ S +    VST+ L++ E  +QI S + H IPLS IL+ L  DGL  LNISSS +FGG++ 
Subjt:  YIPNLQKQVEELVEKKRQLMFSMT----------TRRQEESSSCLLTVSTNSLSEREVVVQIIS-TYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRII

Query:  CHLHLQVEKERKQIESKILNDKVLRIYD
         + H QV+KE++ +ES+I ++K+L I +
Subjt:  CHLHLQVEKERKQIESKILNDKVLRIYD

A0A396JRE0 Putative transcription factor bHLH family5.1e-3342.98Show/hide
Query:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK
        WPFEE    N           ++ LF+ H   +E +  S         DL   ++L HNASERDRRKKIN L+SSLRS+LP  DQ K+LS PAT+S  LK
Subjt:  WPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALK

Query:  YIPNLQKQVEELVEKKRQLM-----------FSMTTRRQEESSSCLLTVSTNSLSEREVVVQI-ISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRI
        YIP LQ QVE L+++K +++            S  ++R++ S +    VST+ L++ E+ +QI   T H IPLS IL+ L  DGL  LN+SSS +FGGR+
Subjt:  YIPNLQKQVEELVEKKRQLM-----------FSMTTRRQEESSSCLLTVSTNSLSEREVVVQI-ISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRI

Query:  ICHLHLQVEKERKQIESKILNDKVLRIYDNINYLQ
          +LH QV+K  + +ES ILN+K+L + D     Q
Subjt:  ICHLHLQVEKERKQIESKILNDKVLRIYDNINYLQ

A0A438I684 Transcription factor ORG22.7e-3446.52Show/hide
Query:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS
        WP+E+    EQN I  +  A+E     P  +    P    + S PS  V+ +  +  ++LNHNASERDRRKKIN L+SSLRS+LP+ DQ K+LS P+TVS
Subjt:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS

Query:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG
          LKYIP LQKQVE L++KK +L+  ++          +R+   +S L  VS N LS+RE+VVQ IST+  H  PLS +LL L EDGL  +N SS  SFG
Subjt:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG

Query:  GRIICHLHLQVEKERKQIESKILNDKVLRI
        GR+  +LHLQVE   + +E ++L++K+L +
Subjt:  GRIICHLHLQVEKERKQIESKILNDKVLRI

A5C6G0 BHLH domain-containing protein2.7e-3446.52Show/hide
Query:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS
        WP+E+    EQN I  +  A+E     P  +    P    + S PS  V+ +  +  ++LNHNASERDRRKKIN L+SSLRS+LP+ DQ K+LS P+TVS
Subjt:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS

Query:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG
          LKYIP LQKQVE L++KK +L+  ++          +R+   +S L  VS N LS+RE+VVQ IST+  H  PLS +LL L EDGL  +N SS  SFG
Subjt:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG

Query:  GRIICHLHLQVEKERKQIESKILNDKVLRI
        GR+  +LHLQVE   + +E ++L++K+L +
Subjt:  GRIICHLHLQVEKERKQIESKILNDKVLRI

D7TIN8 BHLH domain-containing protein2.7e-3446.52Show/hide
Query:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS
        WP+E+    EQN I  +  A+E     P  +    P    + S PS  V+ +  +  ++LNHNASERDRRKKIN L+SSLRS+LP+ DQ K+LS P+TVS
Subjt:  WPFEE--LSEQNCI--DKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVS

Query:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG
          LKYIP LQKQVE L++KK +L+  ++          +R+   +S L  VS N LS+RE+VVQ IST+  H  PLS +LL L EDGL  +N SS  SFG
Subjt:  VALKYIPNLQKQVEELVEKKRQLMFSMT---------TRRQEESSSCLLTVSTNSLSEREVVVQIISTY--HGIPLSCILLGLHEDGLHPLNISSSLSFG

Query:  GRIICHLHLQVEKERKQIESKILNDKVLRI
        GR+  +LHLQVE   + +E ++L++K+L +
Subjt:  GRIICHLHLQVEKERKQIESKILNDKVLRI

SwissProt top hitse value%identityAlignment
A2WZ60 Protein IRON-RELATED TRANSCRIPTION FACTOR 23.0e-2241.88Show/hide
Query:  SPLFDLHFTPMEVDDKSM-PSIIVAVDDLLES------RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEK
        SP  DL     +V D SM P+   AV     S      R+L+HNA ERDRRK++N L+SSLR++LP  D  K+LS P TVS  LKYIP LQKQVE L  K
Subjt:  SPLFDLHFTPMEVDDKSM-PSIIVAVDDLLES------RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEK

Query:  KRQLMFSMTTR-------RQEESSSCLLTVSTNSLSEREVVVQI--ISTYHG--IPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQ
        K++L  + TT         Q  S      VS   +++ E++VQ+  +S   G  +PLS  +  L  +GLH ++ S+S  FG R    +HLQ
Subjt:  KRQLMFSMTTR-------RQEESSSCLLTVSTNSLSEREVVVQI--ISTYHG--IPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQ

Q9FYE6 Transcription factor bHLH1011.9e-2137.43Show/hide
Query:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE-----------SSSCLLTVSTNS
        ++LNHNASERDRR+K+N L+SSLR++LP  DQ ++LS P TV+  +KYIP  +++++ L  +K +L+  ++ +  +E            SS    ++ N 
Subjt:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE-----------SSSCLLTVSTNS

Query:  LSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDKVL
        L++ E+ VQ I+T     +S +LL L E+GL+ +++SSS+S   RI   LHLQ+  + K    +++N  +L
Subjt:  LSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDKVL

Q9M1K0 Transcription factor ORG31.9e-2946.29Show/hide
Query:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEES---------SSCLLTVSTNSLS
        ++LNHNASERDRR+KIN LFSSLRS LP+  Q K+LS PATVS +LKYIP LQ+QV++L++KK +L+  ++ +R  E          ++ + TVS   L 
Subjt:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEES---------SSCLLTVSTNSLS

Query:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD
        + EV+VQI S+  H   +S +L GL ED    +++SSS S G R+   LHLQVEK E  ++  + L+ ++L +Y+
Subjt:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD

Q9M1K1 Transcription factor ORG25.1e-3046.29Show/hide
Query:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE---------SSSCLLTVSTNSLS
        ++LNHNASERDRRKKIN LFSSLRS LP+ DQ K+LS P TVS +LKYIP LQ+QV+ L++KK +++  ++ +R  E          +S L TVS   L 
Subjt:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE---------SSSCLLTVSTNSLS

Query:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD
        + EV+VQ+ S+  H   +S +L G+ EDG   +++SSS S G R+   LHLQVE  +  +I  + L++++L +Y+
Subjt:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD

Q9ZVB5 Transcription factor bHLH1007.4e-2941.9Show/hide
Query:  PLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSM
        PL DL  T   V  ++  +++   D+ +  ++LNHNASER+RRKKIN +FSSLRS LP  +Q K+LS  ATVS ALKYIP LQ+QV++L++KK +L F +
Subjt:  PLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSM

Query:  TTRR-----------QEESSSCLLTVSTNSLSEREVVVQIISTY-HGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDK
        + +R           +E  +S   TVS+  LSE EV+VQI S          +L G+ EDGL  +  SSS S G R+   +HLQ+  +  Q+ S+ L D+
Subjt:  TTRR-----------QEESSSCLLTVSTNSLSEREVVVQIISTY-HGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDK

Query:  VLRIYDNINY
        +L +Y+   +
Subjt:  VLRIYDNINY

Arabidopsis top hitse value%identityAlignment
AT2G41240.1 basic helix-loop-helix protein 1005.2e-3041.9Show/hide
Query:  PLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSM
        PL DL  T   V  ++  +++   D+ +  ++LNHNASER+RRKKIN +FSSLRS LP  +Q K+LS  ATVS ALKYIP LQ+QV++L++KK +L F +
Subjt:  PLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSM

Query:  TTRR-----------QEESSSCLLTVSTNSLSEREVVVQIISTY-HGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDK
        + +R           +E  +S   TVS+  LSE EV+VQI S          +L G+ EDGL  +  SSS S G R+   +HLQ+  +  Q+ S+ L D+
Subjt:  TTRR-----------QEESSSCLLTVSTNSLSEREVVVQIISTY-HGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDK

Query:  VLRIYDNINY
        +L +Y+   +
Subjt:  VLRIYDNINY

AT2G41240.2 basic helix-loop-helix protein 1002.2e-2841.9Show/hide
Query:  PLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSM
        PL DL  T   V  ++  +++   D+ +  ++LNHNASER+RRKKIN +FSSLRS LP  +Q K LS  ATVS ALKYIP LQ+QV++L++KK +L F +
Subjt:  PLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSM

Query:  TTRR-----------QEESSSCLLTVSTNSLSEREVVVQIISTY-HGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDK
        + +R           +E  +S   TVS+  LSE EV+VQI S          +L G+ EDGL  +  SSS S G R+   +HLQ+  +  Q+ S+ L D+
Subjt:  TTRR-----------QEESSSCLLTVSTNSLSEREVVVQIISTY-HGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDK

Query:  VLRIYDNINY
        +L +Y+   +
Subjt:  VLRIYDNINY

AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.6e-3146.29Show/hide
Query:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE---------SSSCLLTVSTNSLS
        ++LNHNASERDRRKKIN LFSSLRS LP+ DQ K+LS P TVS +LKYIP LQ+QV+ L++KK +++  ++ +R  E          +S L TVS   L 
Subjt:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE---------SSSCLLTVSTNSLS

Query:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD
        + EV+VQ+ S+  H   +S +L G+ EDG   +++SSS S G R+   LHLQVE  +  +I  + L++++L +Y+
Subjt:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD

AT3G56980.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-3046.29Show/hide
Query:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEES---------SSCLLTVSTNSLS
        ++LNHNASERDRR+KIN LFSSLRS LP+  Q K+LS PATVS +LKYIP LQ+QV++L++KK +L+  ++ +R  E          ++ + TVS   L 
Subjt:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEES---------SSCLLTVSTNSLS

Query:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD
        + EV+VQI S+  H   +S +L GL ED    +++SSS S G R+   LHLQVEK E  ++  + L+ ++L +Y+
Subjt:  EREVVVQIIST-YHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEK-ERKQIESKILNDKVLRIYD

AT5G04150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-2237.43Show/hide
Query:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE-----------SSSCLLTVSTNS
        ++LNHNASERDRR+K+N L+SSLR++LP  DQ ++LS P TV+  +KYIP  +++++ L  +K +L+  ++ +  +E            SS    ++ N 
Subjt:  RRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLSNPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEE-----------SSSCLLTVSTNS

Query:  LSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDKVL
        L++ E+ VQ I+T     +S +LL L E+GL+ +++SSS+S   RI   LHLQ+  + K    +++N  +L
Subjt:  LSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKERKQIESKILNDKVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCATTATCTTCTTTCTCTTCTTCTTCAAATTTGTTTCTAAGCAATAGAAAAAGGTGGCCATTTGAAGAGCTTTCTGAACAGAACTGCATTGACAAAGTGGCAGC
TGAAAAAAATTGTGAGTCACCATTGTTTGATCTTCATTTCACTCCAATGGAAGTTGATGATAAGTCAATGCCTTCAATCATTGTTGCTGTTGATGATCTATTGGAGTCAA
GGAGGCTCAACCATAATGCAAGCGAGCGCGATCGTAGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCGTTCTTCCTTCTCATGACCAAGGGAAGAGACTAAGC
AATCCAGCAACAGTTTCGGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAGACAGCTTATGTTTTCGATGACTACGAGGAG
ACAAGAAGAAAGCAGCTCATGCTTGCTGACTGTTTCAACCAATAGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAATTTCCACCTATCATGGAATCCCTTTGTCTTGCA
TCTTGCTTGGTTTACATGAAGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGAATCATTTGCCATTTACATCTTCAGGTTGAAAAAGAAAGA
AAACAGATAGAATCCAAGATTCTGAATGACAAAGTGTTGCGAATATATGATAATATTAATTATCTGCAAACATTTTTTGATAACAAGAAATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCATTATCTTCTTTCTCTTCTTCTTCAAATTTGTTTCTAAGCAATAGAAAAAGGTGGCCATTTGAAGAGCTTTCTGAACAGAACTGCATTGACAAAGTGGCAGC
TGAAAAAAATTGTGAGTCACCATTGTTTGATCTTCATTTCACTCCAATGGAAGTTGATGATAAGTCAATGCCTTCAATCATTGTTGCTGTTGATGATCTATTGGAGTCAA
GGAGGCTCAACCATAATGCAAGCGAGCGCGATCGTAGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCGTTCTTCCTTCTCATGACCAAGGGAAGAGACTAAGC
AATCCAGCAACAGTTTCGGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAGGAACTTGTTGAGAAGAAGAGACAGCTTATGTTTTCGATGACTACGAGGAG
ACAAGAAGAAAGCAGCTCATGCTTGCTGACTGTTTCAACCAATAGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAATTTCCACCTATCATGGAATCCCTTTGTCTTGCA
TCTTGCTTGGTTTACATGAAGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGAATCATTTGCCATTTACATCTTCAGGTTGAAAAAGAAAGA
AAACAGATAGAATCCAAGATTCTGAATGACAAAGTGTTGCGAATATATGATAATATTAATTATCTGCAAACATTTTTTGATAACAAGAAATATTAG
Protein sequenceShow/hide protein sequence
MLALSSFSSSSNLFLSNRKRWPFEELSEQNCIDKVAAEKNCESPLFDLHFTPMEVDDKSMPSIIVAVDDLLESRRLNHNASERDRRKKINLLFSSLRSVLPSHDQGKRLS
NPATVSVALKYIPNLQKQVEELVEKKRQLMFSMTTRRQEESSSCLLTVSTNSLSEREVVVQIISTYHGIPLSCILLGLHEDGLHPLNISSSLSFGGRIICHLHLQVEKER
KQIESKILNDKVLRIYDNINYLQTFFDNKKY