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Clc04G04630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE
Genome locationClcChr04:16682896..16687469
RNA-Seq ExpressionClc04G04630
SyntenyClc04G04630
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025988.1 hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa]1.1e-1382.81Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS+ PAE H   D   G+NSA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA

KAG2683596.1 hypothetical protein I3760_10G039000 [Carya illinoinensis]3.5e-0971.93Show/hide
Query:  GFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP
        G+FS RS+ ++IV+AVSL+++PL+LPPLPPPP+LLLFVPVLIMSLL+ LALS S VP
Subjt:  GFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP

KAG6603314.1 hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2188.31Show/hide
Query:  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCV-ADGGDGHNSA
        MVR FFSLRSVAMLIVVA SLLILPLVLPPLPPPPVLLLFVPVLIM  LLFLALSPS+VPAEEH V ADGG GH+SA
Subjt:  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCV-ADGGDGHNSA

PIN18322.1 hypothetical protein CDL12_09027 [Handroanthus impetiginosus]3.5e-0964.52Show/hide
Query:  SLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP
        SLM R FFSL+S+  +I++ VSLL+LPLVLPPLPPPP++LL VPV IM++L+FLA++P Q+P
Subjt:  SLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP

TYK04223.1 hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa]5.2e-1382.81Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS+ PAE H   D   G NSA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA

TrEMBL top hitse value%identityAlignment
A0A0A0L0Y7 Uncharacterized protein2.7e-2392.11Show/hide
Query:  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA
        MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS+VPAEEH   DGGD  NSA
Subjt:  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA

A0A2G9HLC2 Uncharacterized protein1.7e-0964.52Show/hide
Query:  SLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP
        SLM R FFSL+S+  +I++ VSLL+LPLVLPPLPPPP++LL VPV IM++L+FLA++P Q+P
Subjt:  SLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP

A0A5A7SII5 Uncharacterized protein5.1e-1482.81Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS+ PAE H   D   G+NSA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA

A0A5B7AL58 Uncharacterized protein (Fragment)4.5e-1058.82Show/hide
Query:  RRRWRWSLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP
        ++  R +LM+  FFSLR+V +++V+ VSLL+LP+VLPPLPPPP++LLF+P+LIM++L+ LA SPSQ+P
Subjt:  RRRWRWSLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVP

A0A5D3BWW3 Uncharacterized protein2.5e-1382.81Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS+ PAE H   D   G NSA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.7e-0662.26Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS
        +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.9e-0651.39Show/hide
Query:  RRSLGCWRRRWRWSLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS
        RRS    +R     ++   +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Subjt:  RRSLGCWRRRWRWSLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE9.0e-0848.61Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA
        +FS+ S+ +L+ V  SL+ILPLVLPPLPPPP +L+ VPV ++ LLL LA  P+   +       GG G N A
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPAEEHCVADGGDGHNSA

Q8RWS1 Protein ORGAN SIZE RELATED 12.2e-0660.38Show/hide
Query:  RSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPA
        RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  RSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPA

Q8RXL7 ARGOS-like protein2.9e-0655.17Show/hide
Query:  LMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS
        L+   +FSL S+ +L+ +  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Subjt:  LMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS

Arabidopsis top hitse value%identityAlignment
AT2G41230.1 unknown protein1.6e-0760.38Show/hide
Query:  RSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPA
        RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  RSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSQVPA

AT2G44080.1 ARGOS-like2.0e-0755.17Show/hide
Query:  LMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS
        L+   +FSL S+ +L+ +  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Subjt:  LMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS

AT3G59900.1 auxin-regulated gene involved in organ size2.0e-0751.39Show/hide
Query:  RRSLGCWRRRWRWSLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS
        RRS    +R     ++   +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Subjt:  RRSLGCWRRRWRWSLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCGTCTCACGTAGTTGACTATGAGCCCTTGCACTTGAATGAGAATTTGAGTTACGAGGAGAGACATATTGAAATTTTTGCAAGGGAAGTAGAGACCTTGCA
CAATAAAAGAGATAGCACTAGTAAAAGTTATTTGGCAGAAGATCAAAGTACCCGGAGTTGTTCCAAGATTAGAACTTTCGAGGACGAAAGTTTCCCCTCACCGCCTAGTC
GTCGTTCTTCCGCCGGCCACCGCACCGTTCGTCAGGACCGTCGCCGCCGGTCGCTTTGGTTTGGTCGAAGCTTCTCCGGTGTTTTCCGTCGCAGCCGCCGCAGGTCGTCC
GGTCGAAACTTTCTCCTGCGTTTTTCGTTGCTCCGGTCATCCATAGATCTGCCGCCGATCCGTCAACCCTTTTGTCTATGGGTCTGGTGCTGCCGCCGGCCTGTTGTTTG
CTCACCTCGTCGGAGTTTGGGTTGTTGGCGGCGCCGGTGGCGGTGGAGTTTGATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTGTAGCGGTGT
CTCTTTTGATATTGCCGCTTGTGCTGCCGCCGTTGCCGCCCCCACCGGTGCTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTCTGTTCTTGGCGCTGTCGCCG
TCACAGGTTCCGGCGGAGGAGCACTGTGTGGCTGACGGCGGCGACGGTCACAATTCGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTCGTCTCACGTAGTTGACTATGAGCCCTTGCACTTGAATGAGAATTTGAGTTACGAGGAGAGACATATTGAAATTTTTGCAAGGGAAGTAGAGACCTTGCA
CAATAAAAGAGATAGCACTAGTAAAAGTTATTTGGCAGAAGATCAAAGTACCCGGAGTTGTTCCAAGATTAGAACTTTCGAGGACGAAAGTTTCCCCTCACCGCCTAGTC
GTCGTTCTTCCGCCGGCCACCGCACCGTTCGTCAGGACCGTCGCCGCCGGTCGCTTTGGTTTGGTCGAAGCTTCTCCGGTGTTTTCCGTCGCAGCCGCCGCAGGTCGTCC
GGTCGAAACTTTCTCCTGCGTTTTTCGTTGCTCCGGTCATCCATAGATCTGCCGCCGATCCGTCAACCCTTTTGTCTATGGGTCTGGTGCTGCCGCCGGCCTGTTGTTTG
CTCACCTCGTCGGAGTTTGGGTTGTTGGCGGCGCCGGTGGCGGTGGAGTTTGATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTGTAGCGGTGT
CTCTTTTGATATTGCCGCTTGTGCTGCCGCCGTTGCCGCCCCCACCGGTGCTGCTGCTGTTTGTTCCGGTGTTGATTATGTCGTTGCTTCTGTTCTTGGCGCTGTCGCCG
TCACAGGTTCCGGCGGAGGAGCACTGTGTGGCTGACGGCGGCGACGGTCACAATTCGGCTTGA
Protein sequenceShow/hide protein sequence
MADSSHVVDYEPLHLNENLSYEERHIEIFAREVETLHNKRDSTSKSYLAEDQSTRSCSKIRTFEDESFPSPPSRRSSAGHRTVRQDRRRRSLWFGRSFSGVFRRSRRRSS
GRNFLLRFSLLRSSIDLPPIRQPFCLWVWCCRRPVVCSPRRSLGCWRRRWRWSLMVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSP
SQVPAEEHCVADGGDGHNSA