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Clc04G04660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP synthase subunit alpha
Genome locationClcChr04:16871016..16872867
RNA-Seq ExpressionClc04G04660
SyntenyClc04G04660
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0031090 - organelle membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily
IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHX81372.1 ATP synthase F1 subunit 1 [Chrysobalanus icaco]7.7e-2985.71Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        EL P  A+LTTLLES ITNFYTNFQVDEIGRVVSVGDGIA VYGLKEIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
ANS54557.1 ATPase subunit 1 [Cynomorium coccineum]7.7e-2985.71Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        EL P  A+LTTLLES ITNFYTNFQVDEIGRVVSVGDGIA VYGLKEIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
PPD87917.1 hypothetical protein GOBAR_DD15147 [Gossypium barbadense]5.9e-2976Show/hide
Query:  QRHSPLTRDHLR--IRELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        QRHS LT +       E  P  A+LTTLLES ITNFYTNFQVDEIGRVVSVGDGIA VYGL EIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  QRHSPLTRDHLR--IRELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
XP_040259904.1 ATP synthase subunit alpha, mitochondrial-like [Aegilops tauschii subsp. strangulata]1.0e-2882.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES +TNFYTNFQVDEIGRVVSVGDGIACVYGL EIQ GEMVEFAS VKGI LNLENENVGI+VFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
YP_003587244.1 ATPase subunit 1 [Citrullus lanatus]2.6e-2985.71Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  PG A+LTTLLES ITNFYTNFQVDEIGRVVSVGDGIA VYGLKEIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
TrEMBL top hitse value%identityAlignment
A0A023T2S5 ATP synthase subunit alpha3.7e-2985.71Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        EL P  A+LTTLLES ITNFYTNFQVDEIGRVVSVGDGIA VYGLKEIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
A0A1B1LNE5 ATP synthase subunit alpha3.7e-2985.71Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        EL P  A+LTTLLES ITNFYTNFQVDEIGRVVSVGDGIA VYGLKEIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
A0A3B6GRV2 ATP synthase subunit alpha4.9e-2982.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES +TNFYTNFQVDEIGRVVSVGDGIACVYGL EIQ GEMVEFAS VKGI LNLENENVGI+VFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
D5I3B4 ATP synthase subunit alpha1.3e-2985.71Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  PG A+LTTLLES ITNFYTNFQVDEIGRVVSVGDGIA VYGLKEIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
M8BVG5 ATP synthase subunit alpha4.9e-2982.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES +TNFYTNFQVDEIGRVVSVGDGIACVYGL EIQ GEMVEFAS VKGI LNLENENVGI+VFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
SwissProt top hitse value%identityAlignment
P05492 ATP synthase subunit alpha, mitochondrial1.5e-3082.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES ITNFYTNFQVDEIGRV+SVGDGIA VYGL EIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
P0C520 ATP synthase subunit alpha, mitochondrial2.5e-3082.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES +TNFYTNFQVDEIGRVVSVGDGIA VYGL EIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
P0C521 ATP synthase subunit alpha, mitochondrial2.5e-3082.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES +TNFYTNFQVDEIGRVVSVGDGIA VYGL EIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
P0C522 ATP synthase subunit alpha, mitochondrial2.5e-3082.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES +TNFYTNFQVDEIGRVVSVGDGIA VYGL EIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
P12862 ATP synthase subunit alpha, mitochondrial2.5e-3082.14Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        E  P  A+LTTLLES +TNFYTNFQVDEIGRVVSVGDGIA VYGL EIQ GEMVEFAS VKGI LNLENENVGIVVFGSD   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein2.2e-2676.92Show/hide
Query:  AKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        A+LT L ES I NFY NFQVDEIGRVVSVGDGIA VYGL EIQ GEMV FA+ VKG+ LNLENENVGIVVFG D   K
Subjt:  AKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
ATCG00120.1 ATP synthase subunit alpha1.7e-1039.19Show/hide
Query:  KLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDI
        +++ ++   I  +     +   G V+ VGDGIA +YGL E+  GE+VEF     GI LNLE+ NVG+V+ G  +
Subjt:  KLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDI
ATMG01190.1 ATP synthase subunit 16.9e-2875Show/hide
Query:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK
        EL P  A+LT L ES I NFY NFQVDEIGRVVSVGDGIA VYGL EIQ GEMV FA+ VKG+ LNLENENVGIVVFG D   K
Subjt:  ELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACVYGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATCAGAACTTGGCTCGGATAGTAAAACTCTTTGGAATGCAAGAAAAGCTTCAGAAAGCCCAACAAGAATCAACAAAGGAAAAGTTTTCCCTCAATGAAGGCCA
TAGTGAATCAATAAATCCTGAGCAAAAAGATCTTCCTCCAGGATTATACCCGTTTGCCCCATTCACATGCATTATGAGGCCCACGCTTGAGTGGTATGGCCCAGCCTCGA
ATTTCGGGTTTGAGGCCAAGGCTGACCTCATGGTAACAGAGCCTTTTTGCCCTATAAAGGTGCATTATGAGGTCCACACGCCGAGTGGTATGGCCCAACCTCAGATTCCG
GGTCTGAGGCTGAGGCTGACCTCGTGCCGAGAGCGTCGCTGCGCTACCTTCTATACTCCACACCCCGAGAGTTTAAAACTTGGGACAGCAGGAGAGCACAGCGACGCTCT
GACTAAATTTCCTAGACCATTCCATGGTGTCGGAAGGTTCAACGATCATCAGCAGCGGCATTCTCCCTTGACTCGAGACCATTTGAGAATCAGGGAACTTTATCCTGGAG
TTGCAAAACTAACGACTTTATTAGAAAGTGGAATTACTAACTTTTACACGAATTTTCAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCATGTGTT
TATGGATTGAAGGAGATTCAAGTTGGGGAAATGGTGGAATTTGCCAGCAGTGTAAAAGGAATAGGCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAG
TGATATCACGGCCAAATCTATCCTGGAAACAAGCTTGGAAGCCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATCAGAACTTGGCTCGGATAGTAAAACTCTTTGGAATGCAAGAAAAGCTTCAGAAAGCCCAACAAGAATCAACAAAGGAAAAGTTTTCCCTCAATGAAGGCCA
TAGTGAATCAATAAATCCTGAGCAAAAAGATCTTCCTCCAGGATTATACCCGTTTGCCCCATTCACATGCATTATGAGGCCCACGCTTGAGTGGTATGGCCCAGCCTCGA
ATTTCGGGTTTGAGGCCAAGGCTGACCTCATGGTAACAGAGCCTTTTTGCCCTATAAAGGTGCATTATGAGGTCCACACGCCGAGTGGTATGGCCCAACCTCAGATTCCG
GGTCTGAGGCTGAGGCTGACCTCGTGCCGAGAGCGTCGCTGCGCTACCTTCTATACTCCACACCCCGAGAGTTTAAAACTTGGGACAGCAGGAGAGCACAGCGACGCTCT
GACTAAATTTCCTAGACCATTCCATGGTGTCGGAAGGTTCAACGATCATCAGCAGCGGCATTCTCCCTTGACTCGAGACCATTTGAGAATCAGGGAACTTTATCCTGGAG
TTGCAAAACTAACGACTTTATTAGAAAGTGGAATTACTAACTTTTACACGAATTTTCAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCATGTGTT
TATGGATTGAAGGAGATTCAAGTTGGGGAAATGGTGGAATTTGCCAGCAGTGTAAAAGGAATAGGCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAG
TGATATCACGGCCAAATCTATCCTGGAAACAAGCTTGGAAGCCAGATAA
Protein sequenceShow/hide protein sequence
MLDQNLARIVKLFGMQEKLQKAQQESTKEKFSLNEGHSESINPEQKDLPPGLYPFAPFTCIMRPTLEWYGPASNFGFEAKADLMVTEPFCPIKVHYEVHTPSGMAQPQIP
GLRLRLTSCRERRCATFYTPHPESLKLGTAGEHSDALTKFPRPFHGVGRFNDHQQRHSPLTRDHLRIRELYPGVAKLTTLLESGITNFYTNFQVDEIGRVVSVGDGIACV
YGLKEIQVGEMVEFASSVKGIGLNLENENVGIVVFGSDITAKSILETSLEAR