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Clc04G04770 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04770
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionproline-rich protein HaeIII subfamily 1-like
Genome locationClcChr04:17163581..17163940
RNA-Seq ExpressionClc04G04770
SyntenyClc04G04770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603463.1 hypothetical protein SDJN03_04072, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1779.03Show/hide
Query:  FGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPP
        F MYPKGVPIPPSG + RTSA KYTPPPPPS  S   PR PWD PCHRPNPPRYC+LLRPPP
Subjt:  FGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPP

MBA0801286.1 hypothetical protein [Gossypium harknessii]1.7e-0452.86Show/hide
Query:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPST
        +F+M  KG VPI P   ++    PP   T L      KFGM PKGVPIPPSGPS RTS     PPPPP T
Subjt:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPST

MBA0858619.1 hypothetical protein [Gossypium schwendimanii]6.8e-0652.78Show/hide
Query:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPS
        +F M  KG VPI P   +++   PP   T L      KFGM PKGVPIPPSGPS RTSA    PPPPP   S
Subjt:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPS

XP_008442275.1 PREDICTED: proline-rich protein HaeIII subfamily 1-like [Cucumis melo]9.9e-0546.6Show/hide
Query:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPPP
        F MY KG VP   P   +  + PP PF +L  ++KF FGMYPKG+ +PPSGPS RTS    +PPPP +   ER  R P   P   PNP        PPPP
Subjt:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPPP

Query:  SPH
          H
Subjt:  SPH

XP_011654399.2 proline-rich protein HaeIII subfamily 1-like [Cucumis sativus]6.8e-0645.71Show/hide
Query:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSERPRFPWDAPCHR-PNPPR----YCVLLR
        F +YSKG +P   P   +  + PP PF +L+K  KF FGMYPKG+PIPPSGPS RTS    + PPPPS       F +     R P PP           
Subjt:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSERPRFPWDAPCHR-PNPPR----YCVLLR

Query:  PPPPS
        PPPPS
Subjt:  PPPPS

TrEMBL top hitse value%identityAlignment
A0A0D2NUV0 Uncharacterized protein8.1e-0554.29Show/hide
Query:  KFDMYSKGRVPILPPVNSHS-TLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPST
        +F M  KG VPI P  +S S   PP   T L      KFGM PKGVPIPPSGPS  TS     PPPPP T
Subjt:  KFDMYSKGRVPILPPVNSHS-TLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPST

A0A1S3B4V4 proline-rich protein HaeIII subfamily 1-like4.8e-0546.6Show/hide
Query:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPPP
        F MY KG VP   P   +  + PP PF +L  ++KF FGMYPKG+ +PPSGPS RTS    +PPPP +   ER  R P   P   PNP        PPPP
Subjt:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPPP

Query:  SPH
          H
Subjt:  SPH

A0A5D3C2C7 Proline-rich protein HaeIII subfamily 1-like4.8e-0546.6Show/hide
Query:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPPP
        F MY KG VP   P   +  + PP PF +L  ++KF FGMYPKG+ +PPSGPS RTS    +PPPP +   ER  R P   P   PNP        PPPP
Subjt:  FDMYSKGRVPIL-PPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSER-PRFPWDAPCHRPNPPRYCVLLRPPPP

Query:  SPH
          H
Subjt:  SPH

A0A7J9GUN1 Uncharacterized protein8.1e-0552.86Show/hide
Query:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPST
        +F+M  KG VPI P   ++    PP   T L      KFGM PKGVPIPPSGPS RTS     PPPPP T
Subjt:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPST

A0A7J9LJX0 Uncharacterized protein3.3e-0652.78Show/hide
Query:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPS
        +F M  KG VPI P   +++   PP   T L      KFGM PKGVPIPPSGPS RTSA    PPPPP   S
Subjt:  KFDMYSKGRVPILPPV-NSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAATTTGATATGTATTCTAAAGGCCGCGTACCTATTCTTCCACCGGTCAACTCACATTCAACTCTACCACCTACTCCATTCACTGTTCTAGAAAAGGAATCGAA
ATTCAAATTTGGAATGTATCCTAAAGGTGTACCTATTCCTCCATCTGGACCGAGTGGAAGAACTTCGGCTGGCAAATATACTCCTCCGCCACCTCCATCTACGCCAAGTG
AACGACCACGCTTTCCATGGGATGCACCTTGTCACCGTCCTAATCCGCCACGCTACTGCGTCCTATTACGACCACCGCCGCCATCCCCTCACTCTAGAGCTCCAATCATC
GTTGATGTGATTACAAGTGTTGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAATTTGATATGTATTCTAAAGGCCGCGTACCTATTCTTCCACCGGTCAACTCACATTCAACTCTACCACCTACTCCATTCACTGTTCTAGAAAAGGAATCGAA
ATTCAAATTTGGAATGTATCCTAAAGGTGTACCTATTCCTCCATCTGGACCGAGTGGAAGAACTTCGGCTGGCAAATATACTCCTCCGCCACCTCCATCTACGCCAAGTG
AACGACCACGCTTTCCATGGGATGCACCTTGTCACCGTCCTAATCCGCCACGCTACTGCGTCCTATTACGACCACCGCCGCCATCCCCTCACTCTAGAGCTCCAATCATC
GTTGATGTGATTACAAGTGTTGAGGATTAA
Protein sequenceShow/hide protein sequence
MPKFDMYSKGRVPILPPVNSHSTLPPTPFTVLEKESKFKFGMYPKGVPIPPSGPSGRTSAGKYTPPPPPSTPSERPRFPWDAPCHRPNPPRYCVLLRPPPPSPHSRAPII
VDVITSVED