; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G04830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProline-rich protein HaeIII subfamily 1-like
Genome locationClcChr04:17365257..17366881
RNA-Seq ExpressionClc04G04830
SyntenyClc04G04830
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040932.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]6.4e-4059.52Show/hide
Query:  TDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGER
        T+AK  FV       ++NVL    I HPK+   FS  KPK++PDL PP S+GILSK  RT PSG S  TS+N PP PHV+  ILHK+S +NFG+LPKG R
Subjt:  TDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGER

Query:  IPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI
        IPPSGPS+RTS+ PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SDY PPPP   HAP +I
Subjt:  IPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI

KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]6.4e-4860.1Show/hide
Query:  HNTDAKNVFVDVGGFPII-DNVLSDPSIKHPKR-HIRFSTGKPKRVPDLDPPSSV--GILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGV
        + TDAK V V+V  +  I +  L+D  +KHPK   I  S    + +  L PP  V   +L K    +PSGPS RTSD PPPPP  SS IL KQS INFG+
Subjt:  HNTDAKNVFVDVGGFPII-DNVLSDPSIKHPKR-HIRFSTGKPKRVPDLDPPSSV--GILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGV

Query:  LPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP-HAPFVILKKESKIRFGMYPKNNPIPPSAPSGR
        LPKG  IPPSGPSQRTS+ PPPPP A SVIL+K+S INFG+LPKGV IPPSGPS R+S+YPPPPP HA  VIL  +SKI FGM PK  PIPPS PS R
Subjt:  LPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP-HAPFVILKKESKIRFGMYPKNNPIPPSAPSGR

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]3.1e-4256.35Show/hide
Query:  HNTDAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGV
        + TDAKNV  VDV    I +  L+D  +++PK     S+   +R      PS     G+L K     PS PS RTSD PPPPP  SS IL+K S IN G+
Subjt:  HNTDAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGV

Query:  LPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR
        LP+G  IPPSGPSQRTS+ PPPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A  VIL K+SKI  GM P+  PIPP   S R
Subjt:  LPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR

XP_031744042.1 proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]1.9e-3952.85Show/hide
Query:  HNTDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKG
        + T+  N+F       +++N      I HPK+HIRFS  K KR+PD D  S  GILSK  R  PSGPS R+SD+ PPP    S +LHK+S +NFG+LPKG
Subjt:  HNTDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKG

Query:  ERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR
             SGPSQR S+SPP PP  PS++LHKES I FGILPKGV    SGPS R SD PPPPP  P ++L KES+I FG+  K      S PS R
Subjt:  ERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR

XP_038882352.1 uncharacterized protein LOC120073615 [Benincasa hispida]8.0e-5973.65Show/hide
Query:  HNTDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKG
        + TDAKNVFV   G   I+N LSD +IKHPKRHI FS GK KR+PDL PP ++GILSKEER  PSG S  TSDNPPPPPHV S ILHK+S INF VL KG
Subjt:  HNTDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKG

Query:  ERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
         RIPPSGPSQRTSESPPPPPHA SVILHK+ GINFGILPK + IPPSGPS R S+YP PP HAP VI
Subjt:  ERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

TrEMBL top hitse value%identityAlignment
A0A438DWZ1 Uncharacterized protein6.9e-2452.41Show/hide
Query:  PPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSG
        P    G+L K     PSGPS RTSD PPPP   +     + S   FG+LPKG+ IPPSGPS R SE+ PPPPH+      +   + FG+LPKG  IPPSG
Subjt:  PPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSG

Query:  PSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR
        PS R+SD  PPPP  PF    + S  RFGM PK +PIPPS PS R
Subjt:  PSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR

A0A5A7T8R0 Uncharacterized protein1.2e-2349.32Show/hide
Query:  PIIDNVLSDPSIKHPKRHIRFS--TGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHV------SSTILHKQSSINFGVLPKGERIPPSG
        P  +N L D  +KHPK HIRFS    KPKRVPDL PP S+GIL+   R  PS      S    P  H+         +       + G+L K  R PP G
Subjt:  PIIDNVLSDPSIKHPKRHIRFS--TGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHV------SSTILHKQSSINFGVLPKGERIPPSG

Query:  PSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRS
         SQRT ++P PPPHA  +ILHK+S I FGILPKGVR+PPSGPS R+
Subjt:  PSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRS

A0A5D3BP86 Proline-rich protein HaeIII subfamily 1-like6.0e-3653.89Show/hide
Query:  HNTDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKG
        + T+ +N+F       + +N L   SI HPK++I FS  K K  P+ D     GI SK+ R  PSGPS R+SD+PP P    S IL K+S INFG+LPKG
Subjt:  HNTDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKG

Query:  ERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
         RIPPSGPSQR S+SP P    PS  LHK S + FG+LPKG  IPPSGPS R+SD PPPPPH+P +I
Subjt:  ERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

A0A5D3CGG1 Proline-rich protein HaeIII subfamily 1-like3.1e-4059.52Show/hide
Query:  TDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGER
        T+AK  FV       ++NVL    I HPK+   FS  KPK++PDL PP S+GILSK  RT PSG S  TS+N PP PHV+  ILHK+S +NFG+LPKG R
Subjt:  TDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGER

Query:  IPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI
        IPPSGPS+RTS+ PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SDY PPPP   HAP +I
Subjt:  IPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like1.5e-4256.35Show/hide
Query:  HNTDAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGV
        + TDAKNV  VDV    I +  L+D  +++PK     S+   +R      PS     G+L K     PS PS RTSD PPPPP  SS IL+K S IN G+
Subjt:  HNTDAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGV

Query:  LPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR
        LP+G  IPPSGPSQRTS+ PPPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A  VIL K+SKI  GM P+  PIPP   S R
Subjt:  LPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCAACCCGAACCCATTTCTTTATCCATTCACACACATCTTAGCTGAACTTGCTGTGTCGCATGCTTTCCATATTCCACAATTGACAATTTACACAATACAAAT
ATCGCACAACACAGATGCTAAAAATGTTTTTGTAGACGTCGGAGGCTTCCCTATCATAGACAACGTATTGAGCGACCCGAGTATAAAACATCCGAAAAGGCATATCCGTT
TCTCAACGGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCG
GACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAG
CCAAAGAACTTCAGAGAGTCCACCTCCCCCGCCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTTGGAATATTACCGAAAGGCGTGCGTATTCCAC
CGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGATTAGATTTGGGATGTATCCTAAAAAT
AACCCCATTCCACCATCTGCTCCAAGCGGACGCGTACCATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATCAACCCGAACCCATTTCTTTATCCATTCACACACATCTTAGCTGAACTTGCTGTGTCGCATGCTTTCCATATTCCACAATTGACAATTTACACAATACAAAT
ATCGCACAACACAGATGCTAAAAATGTTTTTGTAGACGTCGGAGGCTTCCCTATCATAGACAACGTATTGAGCGACCCGAGTATAAAACATCCGAAAAGGCATATCCGTT
TCTCAACGGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCG
GACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAG
CCAAAGAACTTCAGAGAGTCCACCTCCCCCGCCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTTGGAATATTACCGAAAGGCGTGCGTATTCCAC
CGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGATTAGATTTGGGATGTATCCTAAAAAT
AACCCCATTCCACCATCTGCTCCAAGCGGACGCGTACCATCATGA
Protein sequenceShow/hide protein sequence
MLINPNPFLYPFTHILAELAVSHAFHIPQLTIYTIQISHNTDAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTS
DNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKN
NPIPPSAPSGRVPS