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Clc04G04870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G04870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProline-rich protein HaeIII subfamily 1-like
Genome locationClcChr04:17370934..17371599
RNA-Seq ExpressionClc04G04870
SyntenyClc04G04870
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040932.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]1.0e-4759.49Show/hide
Query:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP
        MVS+ + N+FF ACALI LGLH  IY  +AK  FV       ++NVL    I HPK+   FS  KPK++PDL PP S+GILSK  RT PSG S  TS+N 
Subjt:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI
        PP PHV+  ILHK+S +NFG+LPKG RIPPSGPS+RTS+ PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SDY PPPP   HAP +I
Subjt:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI

KAA0043502.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]3.4e-4355.21Show/hide
Query:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP
        M+SISS N+ F  CA++LLGLH  IYQ + +N+F       + +N L   SI HPK++I FS  K K  P+ D     GI SK+ R  PSGPS R+SD+P
Subjt:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
        P P    S IL K+S INFG+LPKG RIPPSGPSQR S+SP P    PS  LHK S + FG+LPKG  IPPSGPS R+SD PPPPPH+P +I
Subjt:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]9.3e-4959.7Show/hide
Query:  VAIYQADAKNVFVDVGGFPII-DNVLSDPSIKHPKR-HIRFSTGKPKRVPDLDPPSSV--GILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSIN
        V +Y+ DAK V V+V  +  I +  L+D  +KHPK   I  S    + +  L PP  V   +L K    +PSGPS RTSD PPPPP  SS IL KQS IN
Subjt:  VAIYQADAKNVFVDVGGFPII-DNVLSDPSIKHPKR-HIRFSTGKPKRVPDLDPPSSV--GILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSIN

Query:  FGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP-HAPFVILKKESKIRFGMYPKNNPIPPSAPSG
        FG+LPKG  IPPSGPSQRTS+ PPPPP A SVIL+K+S INFG+LPKGV IPPSGPS R+S+YPPPPP HA  VIL  +SKI FGM PK  PIPPS PS 
Subjt:  FGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP-HAPFVILKKESKIRFGMYPKNNPIPPSAPSG

Query:  R
        R
Subjt:  R

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]4.5e-4356.57Show/hide
Query:  IYQADAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG
        IY+ DAKNV  VDV    I +  L+D  +++PK     S+   +R      PS     G+L K     PS PS RTSD PPPPP  SS IL+K S IN G
Subjt:  IYQADAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG

Query:  VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR
        +LP+G  IPPSGPSQRTS+ PPPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A  VIL K+SKI  GM P+  PIPP   S R
Subjt:  VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR

XP_038882352.1 uncharacterized protein LOC120073615 [Benincasa hispida]1.8e-6873.96Show/hide
Query:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP
        MVSIS  NVFF ACA I LGLH  IYQ DAKNVFV   G   I+N LSD +IKHPKRHI FS GK KR+PDL PP ++GILSKEER  PSG S  TSDNP
Subjt:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
        PPPPHV S ILHK+S INF VL KG RIPPSGPSQRTSESPPPPPHA SVILHK+ GINFGILPK + IPPSGPS R S+YP PP HAP VI
Subjt:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

TrEMBL top hitse value%identityAlignment
A0A5A7T8R0 Uncharacterized protein5.0e-3244.64Show/hide
Query:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPS----------
        M+S SS NV F  CALILLGLH   Y  DA++  V   G  +I+N L+D  I+HPKRHIRFS  KPKRVPDL PP S+GIL+K+  T PS          
Subjt:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPS----------

Query:  -----------GPSP-RTSDNPPP------------PPHVS----STILHKQSSINF-----------------GVLPKGERIPPSGPSQRTSESPPPPP
                    P P R  D  PP            PP  +    S   H ++ I F                 G+L K  R PP G SQRT ++P PPP
Subjt:  -----------GPSP-RTSDNPPP------------PPHVS----STILHKQSSINF-----------------GVLPKGERIPPSGPSQRTSESPPPPP

Query:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS
        HA  +ILHK+S I FGILPKGVR+PPSGPS R+
Subjt:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS

A0A5D3BP86 Proline-rich protein HaeIII subfamily 1-like1.7e-4355.21Show/hide
Query:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP
        M+SISS N+ F  CA++LLGLH  IYQ + +N+F       + +N L   SI HPK++I FS  K K  P+ D     GI SK+ R  PSGPS R+SD+P
Subjt:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
        P P    S IL K+S INFG+LPKG RIPPSGPSQR S+SP P    PS  LHK S + FG+LPKG  IPPSGPS R+SD PPPPPH+P +I
Subjt:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

A0A5D3BVE5 Uncharacterized protein3.6e-3043.78Show/hide
Query:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPS----------
        M+S SS NV F ACALILLG H   Y  DA+   V   G  +I+N L+D  I+HPKRHIRFS  KPKRVPDL PP S+GIL+K+  T PS          
Subjt:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPS----------

Query:  -----------GPSP-RTSDNPPP------------PPHVS----STILHKQSSINF-----------------GVLPKGERIPPSGPSQRTSESPPPPP
                    P P R  D  PP            PP  +    S   H +S I F                 G+L K  R PPSG SQRT ++P  PP
Subjt:  -----------GPSP-RTSDNPPP------------PPHVS----STILHKQSSINF-----------------GVLPKGERIPPSGPSQRTSESPPPPP

Query:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS
        H   +ILHK+S I FGILPKGV +P SGPS R+
Subjt:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS

A0A5D3CGG1 Proline-rich protein HaeIII subfamily 1-like5.0e-4859.49Show/hide
Query:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP
        MVS+ + N+FF ACALI LGLH  IY  +AK  FV       ++NVL    I HPK+   FS  KPK++PDL PP S+GILSK  RT PSG S  TS+N 
Subjt:  MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI
        PP PHV+  ILHK+S +NFG+LPKG RIPPSGPS+RTS+ PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SDY PPPP   HAP +I
Subjt:  PPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like2.2e-4356.57Show/hide
Query:  IYQADAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG
        IY+ DAKNV  VDV    I +  L+D  +++PK     S+   +R      PS     G+L K     PS PS RTSD PPPPP  SS IL+K S IN G
Subjt:  IYQADAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG

Query:  VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR
        +LP+G  IPPSGPSQRTS+ PPPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A  VIL K+SKI  GM P+  PIPP   S R
Subjt:  VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGCAGCTTGCGCTCTCATCCTCCTTGGGTTGCACGTTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGT
CGGAGGCTTCCCTATCATAGACAACGTATTGAGCGACCCGAGTATAAAACATCCGAAAAGGCATATCCGTTTCTCAACGGGGAAACCCAAGAGGGTACCTGACTTAGATC
CACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATT
TTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCGCCGCATGC
CCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGC
CCCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGATTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGCGTACCA
TCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGCAGCTTGCGCTCTCATCCTCCTTGGGTTGCACGTTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGT
CGGAGGCTTCCCTATCATAGACAACGTATTGAGCGACCCGAGTATAAAACATCCGAAAAGGCATATCCGTTTCTCAACGGGGAAACCCAAGAGGGTACCTGACTTAGATC
CACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATT
TTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCGCCGCATGC
CCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGC
CCCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGATTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGCGTACCA
TCATGA
Protein sequenceShow/hide protein sequence
MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTI
LHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGRVP
S