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Clc04G05850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G05850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:18543862..18549779
RNA-Seq ExpressionClc04G05850
SyntenyClc04G05850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]4.7e-0435.9Show/hide
Query:  CSRAKAVWSVISLDCGSSKMR-NKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDY
        C RAK +W+++     +S +  N   +DIW  L   L+     LA  T WAIW DRN   +  S+ +   RC+WI  Y
Subjt:  CSRAKAVWSVISLDCGSSKMR-NKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDY
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.5e-0533.75Show/hide
Query:  CSRAKAVWSVI--SLDCGSSKMRNKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDYV
        C RA+ +W  +   L C S++  N   L++W  LT  L+  +L LA IT W IW DRN + +   +  V+ +C+W+  ++
Subjt:  CSRAKAVWSVI--SLDCGSSKMRNKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDYV
TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047862.3e-0435.9Show/hide
Query:  CSRAKAVWSVISLDCGSSKMR-NKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDY
        C RAK +W+++     +S +  N   +DIW  L   L+     LA  T WAIW DRN   +  S+ +   RC+WI  Y
Subjt:  CSRAKAVWSVISLDCGSSKMR-NKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDY
A0A6J1DX30 uncharacterized protein LOC1110248741.2e-0533.75Show/hide
Query:  CSRAKAVWSVI--SLDCGSSKMRNKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDYV
        C RA+ +W  +   L C S++  N   L++W  LT  L+  +L LA IT W IW DRN + +   +  V+ +C+W+  ++
Subjt:  CSRAKAVWSVI--SLDCGSSKMRNKDCLDIWKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDYV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTATCTCCTCTTTGGCCCGAATCACCTCTTCGTGCAAACAAATAGAGGGATAACATCAAAAGGTTTGAACAACCTCAGAGTTCTATCACCTGTTTGGTTTGGATC
ACCATCTCGTGCAGCTAGAAAGAGGGATGGTACCAGAAGGTTTGAACAACCTCGGTGTTCCATCACCTATCTAGCTCTCCTTGTGTCGACAAATAGATGGATGACATTGG
AAGAATTATGGTTTACTTTACCAAGCATATGGTGCTCAGCAAGAGCAAACATTCTAAGGTTATCGATTCTCTTAGTGTACGGCTTGAAGTTACATGAAATAAGTTTGCCA
AGGCCCCTCCATACTGGCTCTAATGGAATTTGTGATCCTGTCCTGCAATTGTTGGACCGACAAAGAGGCGACAGAGGTGGATTATTGTTGCAACTGAGTTTTCCCTTTGT
CATTCATCTTGGTAGCGGGATTCCATCAACCACCTCTAGATGTTCTCCACGATGGCATAACCTTGTTCCTTCTCCTGCATTGAAGGAATCGAATTCCCAGCAGAATTTGC
AGCAGAAAGGTCGAAACTGTGTCCCATGCTCTAGAGCTAAAGCGGTTTGGTCGGTCATATCTCTTGACTGTGGGTCTTCTAAGATGCGGAATAAGGATTGTTTAGACATT
TGGAAGGGTTTGACTTGGAGTTTAGATGATTCAAATCTCGCGCTGGCTTGCATTACTACCTGGGCTATTTGGGGGGATAGGAATAAAGTTTGTAACATGGATAGCATTCC
ATCTGTGCAACATAGATGTGATTGGATTATGGATTACGTGGTGGAAGTTGGTGTGAAGCCAATAGATCAATGTAGTTCTATAATCGACTCTATGGCAACGCCATCTGTCT
GCCCTACGCCGTTCGCCACCCACCATCCTCGCCGCGCCTCTGCCTTGCCTTTCCGCCGCCGAATTCCTGGATTCATTTCTAGAACTCAGATCCAGCACTTGTTAGAGCTT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTATCTCCTCTTTGGCCCGAATCACCTCTTCGTGCAAACAAATAGAGGGATAACATCAAAAGGTTTGAACAACCTCAGAGTTCTATCACCTGTTTGGTTTGGATC
ACCATCTCGTGCAGCTAGAAAGAGGGATGGTACCAGAAGGTTTGAACAACCTCGGTGTTCCATCACCTATCTAGCTCTCCTTGTGTCGACAAATAGATGGATGACATTGG
AAGAATTATGGTTTACTTTACCAAGCATATGGTGCTCAGCAAGAGCAAACATTCTAAGGTTATCGATTCTCTTAGTGTACGGCTTGAAGTTACATGAAATAAGTTTGCCA
AGGCCCCTCCATACTGGCTCTAATGGAATTTGTGATCCTGTCCTGCAATTGTTGGACCGACAAAGAGGCGACAGAGGTGGATTATTGTTGCAACTGAGTTTTCCCTTTGT
CATTCATCTTGGTAGCGGGATTCCATCAACCACCTCTAGATGTTCTCCACGATGGCATAACCTTGTTCCTTCTCCTGCATTGAAGGAATCGAATTCCCAGCAGAATTTGC
AGCAGAAAGGTCGAAACTGTGTCCCATGCTCTAGAGCTAAAGCGGTTTGGTCGGTCATATCTCTTGACTGTGGGTCTTCTAAGATGCGGAATAAGGATTGTTTAGACATT
TGGAAGGGTTTGACTTGGAGTTTAGATGATTCAAATCTCGCGCTGGCTTGCATTACTACCTGGGCTATTTGGGGGGATAGGAATAAAGTTTGTAACATGGATAGCATTCC
ATCTGTGCAACATAGATGTGATTGGATTATGGATTACGTGGTGGAAGTTGGTGTGAAGCCAATAGATCAATGTAGTTCTATAATCGACTCTATGGCAACGCCATCTGTCT
GCCCTACGCCGTTCGCCACCCACCATCCTCGCCGCGCCTCTGCCTTGCCTTTCCGCCGCCGAATTCCTGGATTCATTTCTAGAACTCAGATCCAGCACTTGTTAGAGCTT
TAA
Protein sequenceShow/hide protein sequence
MFYLLFGPNHLFVQTNRGITSKGLNNLRVLSPVWFGSPSRAARKRDGTRRFEQPRCSITYLALLVSTNRWMTLEELWFTLPSIWCSARANILRLSILLVYGLKLHEISLP
RPLHTGSNGICDPVLQLLDRQRGDRGGLLLQLSFPFVIHLGSGIPSTTSRCSPRWHNLVPSPALKESNSQQNLQQKGRNCVPCSRAKAVWSVISLDCGSSKMRNKDCLDI
WKGLTWSLDDSNLALACITTWAIWGDRNKVCNMDSIPSVQHRCDWIMDYVVEVGVKPIDQCSSIIDSMATPSVCPTPFATHHPRRASALPFRRRIPGFISRTQIQHLLEL