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Clc04G06060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G06060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:18974540..18975026
RNA-Seq ExpressionClc04G06060
SyntenyClc04G06060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025884.1 hypothetical protein E6C27_scaffold34G001680 [Cucumis melo var. makuwa]1.3e-2379.27Show/hide
Query:  MKLKNISELISLFFLLILFLLPFNIERVSPTSAV-----ADADVSATA-VFRPKSHPHDGGATVFGAQKRRVYTGPNPLHNR
        MKLKNISELISLFFLLILFLLPFNIER+ PTSA+     AD++V  TA VFRPK H HDG A VFGAQKRRVYTGPNPLHNR
Subjt:  MKLKNISELISLFFLLILFLLPFNIERVSPTSAV-----ADADVSATA-VFRPKSHPHDGGATVFGAQKRRVYTGPNPLHNR
KAG6595427.1 hypothetical protein SDJN03_11980, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1665.85Show/hide
Query:  MKLKNISELISLFFLLI--LFLLPFNIERVSPTSAVADADVSATAVFRPKSH----PHDGGATVFGAQKRRVYTGPNPLHNR
        M+LKNI+EL++LFFLL+  LFLLPF+ +   PTS VA A  +ATA+ RPK H     HDGGA VF AQKRRVYTGPNPLHNR
Subjt:  MKLKNISELISLFFLLI--LFLLPFNIERVSPTSAVADADVSATAVFRPKSH----PHDGGATVFGAQKRRVYTGPNPLHNR
TrEMBL top hitse value%identityAlignment
A0A5A7SJL7 Uncharacterized protein6.5e-2479.27Show/hide
Query:  MKLKNISELISLFFLLILFLLPFNIERVSPTSAV-----ADADVSATA-VFRPKSHPHDGGATVFGAQKRRVYTGPNPLHNR
        MKLKNISELISLFFLLILFLLPFNIER+ PTSA+     AD++V  TA VFRPK H HDG A VFGAQKRRVYTGPNPLHNR
Subjt:  MKLKNISELISLFFLLILFLLPFNIERVSPTSAV-----ADADVSATA-VFRPKSHPHDGGATVFGAQKRRVYTGPNPLHNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGAAGAACATTTCAGAGCTTATAAGCTTGTTTTTTCTTCTTATTCTTTTTCTTCTTCCCTTCAATATTGAAAGAGTATCACCCACCTCCGCCGTCGCCGATGC
CGATGTCTCTGCCACTGCCGTCTTCCGCCCTAAAAGCCACCCCCATGACGGTGGCGCCACCGTGTTTGGTGCTCAGAAGAGAAGAGTCTACACTGGTCCAAATCCTCTTC
ATAACAGATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAGCACCAAATCCTATGCATTTTGGCCTCACTCTTCATTGATTCTCGAGAAGAAGTGAAACAAAAATTACATCTTTTCAGTGAGAGAGGGACAAAGATGCAA
ACTTTGGAGTGAAAAGAGAAAACCCATTAAGCCAAAAACTTTTTTTAAGAGGGAAAAAATGAAATTGAAGAACATTTCAGAGCTTATAAGCTTGTTTTTTCTTCTTATTC
TTTTTCTTCTTCCCTTCAATATTGAAAGAGTATCACCCACCTCCGCCGTCGCCGATGCCGATGTCTCTGCCACTGCCGTCTTCCGCCCTAAAAGCCACCCCCATGACGGT
GGCGCCACCGTGTTTGGTGCTCAGAAGAGAAGAGTCTACACTGGTCCAAATCCTCTTCATAACAGATAAGTAATTGAAGAAGAGGGAAAAAAAATTAAACCCCCTCAAAA
TTTCTTCTTCATATATTCTTTCTTTATTTCTCTAGCCTCTTTTTTTT
Protein sequenceShow/hide protein sequence
MKLKNISELISLFFLLILFLLPFNIERVSPTSAVADADVSATAVFRPKSHPHDGGATVFGAQKRRVYTGPNPLHNR