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Clc04G06180 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G06180
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:19295831..19297137
RNA-Seq ExpressionClc04G06180
SyntenyClc04G06180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54678.1 hypothetical protein Csa_012366 [Cucumis sativus]9.7e-1950.54Show/hide
Query:  FVQTLDRVLTV-VEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEGEYGR----G
        FV  +  VL V  EVDGRKSLLQKE R+D++KLVK+ST LD DFHGEMV  +Q KK+PTDLED P DQ+GE+SE ++    EE +P  +EGEYG     G
Subjt:  FVQTLDRVLTV-VEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEGEYGR----G

Query:  TPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN
          G+  G+   G GG+        GE+  GDDDG              ESGE  E  DGGESGEE     NGE+ S E  PGDN
Subjt:  TPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN

TYK09628.1 hypothetical protein E5676_scaffold447G00230 [Cucumis melo var. makuwa]5.7e-1951.98Show/hide
Query:  TLDRVLTVVEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYGR-GTPGEESG--
        T+  +L   +VDGRKSLLQKE R+D +KLV++ST LD DFHGEMV N+Q KK+PTDLED P DQ+GE+SE E G EE +P  +EGE    G  G ESG  
Subjt:  TLDRVLTVVEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYGR-GTPGEESG--

Query:  EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN
        E   GD G+ GE            GDDDG             ESGE  E   GG SGEE    NNGEDS E  PGDN
Subjt:  EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN

XP_038882385.1 spore wall protein 2-like [Benincasa hispida]1.8e-3664.41Show/hide
Query:  LTVVEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVA-NHQMKKIPTDLEDPVDQEGESSEGEDGLEEGIPAGDEGEYGRGTPGEESGEVPE---G
        L  +EVDGRKSLLQKE+RE+ +KL K+ST+LD DFHG+MVA NHQMKK PTDLED  +QE ESSEG++GLEEGIP GDEGEYGRGTP  ESGEVPE    
Subjt:  LTVVEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVA-NHQMKKIPTDLEDPVDQEGESSEGEDGLEEGIPAGDEGEYGRGTPGEESGEVPE---G

Query:  DGGEHGEYVPGDDDGES------GEGVEGDDGGESGEEDTGNNGEDSGEMEPGDNQEKSRGNDGDGDIVSDDEDKRG
        +GG+  E  PGDD GES      G+G + DD GES E D G+ G D G M   DNQ +SRG+ GD DIV DD DKRG
Subjt:  DGGEHGEYVPGDDDGES------GEGVEGDDGGESGEEDTGNNGEDSGEMEPGDNQEKSRGNDGDGDIVSDDEDKRG

TrEMBL top hitse value%identityAlignment
A0A0A0KYS7 Uncharacterized protein4.7e-1950.54Show/hide
Query:  FVQTLDRVLTV-VEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEGEYGR----G
        FV  +  VL V  EVDGRKSLLQKE R+D++KLVK+ST LD DFHGEMV  +Q KK+PTDLED P DQ+GE+SE ++    EE +P  +EGEYG     G
Subjt:  FVQTLDRVLTV-VEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEGEYGR----G

Query:  TPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN
          G+  G+   G GG+        GE+  GDDDG              ESGE  E  DGGESGEE     NGE+ S E  PGDN
Subjt:  TPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN

A0A5D3CEH4 Uncharacterized protein2.8e-1951.98Show/hide
Query:  TLDRVLTVVEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYGR-GTPGEESG--
        T+  +L   +VDGRKSLLQKE R+D +KLV++ST LD DFHGEMV N+Q KK+PTDLED P DQ+GE+SE E G EE +P  +EGE    G  G ESG  
Subjt:  TLDRVLTVVEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYGR-GTPGEESG--

Query:  EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN
        E   GD G+ GE            GDDDG             ESGE  E   GG SGEE    NNGEDS E  PGDN
Subjt:  EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAACACCTCTTTGAGAGATTGAAGCTAGGCTTCAGATCTAATGAACTCTTGACGCTAGTCGACAAGCCGTCAAAAGTAATTATCCCTCAACGTTGTATATTACG
GTGCCAAAAGTTTGTTCAAACGCTCGACAGGGTGTTGACCGTCGTTGAAGTTGATGGAAGAAAGTCTTTACTTCAAAAAGAAAATAGGGAAGACTACTCTAAGCTTGTCA
AGAAAAGTACTCTTTTAGATGGAGATTTTCATGGTGAAATGGTGGCTAATCATCAAATGAAAAAAATTCCAACTGATTTAGAAGATCCTGTGGATCAAGAGGGCGAAAGT
TCCGAAGGTGAAGACGGATTAGAGGAAGGCATTCCTGCTGGCGACGAAGGAGAATATGGAAGAGGAACTCCTGGAGAAGAATCTGGAGAAGTTCCTGAAGGTGATGGAGG
AGAACATGGAGAATATGTCCCTGGAGATGACGACGGAGAATCTGGCGAAGGGGTCGAAGGCGATGACGGAGGCGAATCTGGAGAAGAGGATACTGGTAACAATGGAGAAG
ATTCTGGAGAAATGGAACCTGGAGACAACCAAGAAAAATCTAGAGGCAACGATGGAGATGGAGATATTGTAAGTGATGATGAAGATAAAAGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAACACCTCTTTGAGAGATTGAAGCTAGGCTTCAGATCTAATGAACTCTTGACGCTAGTCGACAAGCCGTCAAAAGTAATTATCCCTCAACGTTGTATATTACG
GTGCCAAAAGTTTGTTCAAACGCTCGACAGGGTGTTGACCGTCGTTGAAGTTGATGGAAGAAAGTCTTTACTTCAAAAAGAAAATAGGGAAGACTACTCTAAGCTTGTCA
AGAAAAGTACTCTTTTAGATGGAGATTTTCATGGTGAAATGGTGGCTAATCATCAAATGAAAAAAATTCCAACTGATTTAGAAGATCCTGTGGATCAAGAGGGCGAAAGT
TCCGAAGGTGAAGACGGATTAGAGGAAGGCATTCCTGCTGGCGACGAAGGAGAATATGGAAGAGGAACTCCTGGAGAAGAATCTGGAGAAGTTCCTGAAGGTGATGGAGG
AGAACATGGAGAATATGTCCCTGGAGATGACGACGGAGAATCTGGCGAAGGGGTCGAAGGCGATGACGGAGGCGAATCTGGAGAAGAGGATACTGGTAACAATGGAGAAG
ATTCTGGAGAAATGGAACCTGGAGACAACCAAGAAAAATCTAGAGGCAACGATGGAGATGGAGATATTGTAAGTGATGATGAAGATAAAAGGGGGTGA
Protein sequenceShow/hide protein sequence
MVKHLFERLKLGFRSNELLTLVDKPSKVIIPQRCILRCQKFVQTLDRVLTVVEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLEDPVDQEGES
SEGEDGLEEGIPAGDEGEYGRGTPGEESGEVPEGDGGEHGEYVPGDDDGESGEGVEGDDGGESGEEDTGNNGEDSGEMEPGDNQEKSRGNDGDGDIVSDDEDKRG