; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G06730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G06730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNon-specific lipid-transfer protein
Genome locationClcChr04:20105858..20106939
RNA-Seq ExpressionClc04G06730
SyntenyClc04G06730
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025399.1 non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa]3.8e-4073.11Show/hide
Query:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA
        M S L TI+KLGL +T   AVIGGGVTTEA VTCNQVVS LS CI YVTGGG+PS  CC GV+QLN  AQTT DRQ VC+CLKS++ GV YN QNVANAA
Subjt:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA

Query:  ALPAKCGVQLPYPINPNVD
        ALP KCGV LPY INPN D
Subjt:  ALPAKCGVQLPYPINPNVD

XP_004151695.1 non-specific lipid-transfer protein 1 [Cucumis sativus]1.0e-4073.11Show/hide
Query:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA
        M S L TI+KLGL +TF  AVIGGGVTTEA V+CNQV++ L  C+ YVTGGG PSS CC GVKQL+  A+TT DRQAVC+CLKS+V GVKYN QNVANAA
Subjt:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA

Query:  ALPAKCGVQLPYPINPNVD
        ALP KCGV LPY INPNVD
Subjt:  ALPAKCGVQLPYPINPNVD

XP_008463259.1 PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo]3.8e-4073.11Show/hide
Query:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA
        M S L TI+KLGL +T   AVIGGGVTTEA VTCNQVVS LS CI YVTGGG+PS  CC GV+QLN  AQTT DRQ VC+CLKS++ GV YN QNVANAA
Subjt:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA

Query:  ALPAKCGVQLPYPINPNVD
        ALP KCGV LPY INPN D
Subjt:  ALPAKCGVQLPYPINPNVD

XP_022966484.1 non-specific lipid-transfer protein 1-like [Cucurbita maxima]3.1e-3465.77Show/hide
Query:  VKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGV
        VK+GL +   C +I GG  +EAAVTCNQVVS L +C+ YVTGGGAPS+TCC GV+ LN +A T  DRQAVC CL+S+VKGV YNAQ +ANAAALPA+CGV
Subjt:  VKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGV

Query:  QLPYPINPNVD
        +LPY I+P +D
Subjt:  QLPYPINPNVD

XP_038883886.1 non-specific lipid-transfer protein 1-like [Benincasa hispida]5.5e-3971.43Show/hide
Query:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA
        M S L   VKLGL ITF C VIGG V TEA VTCNQV+S L+ C+Q+VTGGGAPS  CC GV+QL  +AQTT DRQAVC+CLKSVV GV+Y+ +NVANAA
Subjt:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA

Query:  ALPAKCGVQLPYPINPNVD
        ALP+KCGVQLPY I+PNVD
Subjt:  ALPAKCGVQLPYPINPNVD

TrEMBL top hitse value%identityAlignment
A0A0A0KY77 Non-specific lipid-transfer protein4.9e-4173.11Show/hide
Query:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA
        M S L TI+KLGL +TF  AVIGGGVTTEA V+CNQV++ L  C+ YVTGGG PSS CC GVKQL+  A+TT DRQAVC+CLKS+V GVKYN QNVANAA
Subjt:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA

Query:  ALPAKCGVQLPYPINPNVD
        ALP KCGV LPY INPNVD
Subjt:  ALPAKCGVQLPYPINPNVD

A0A1S3CIS8 Non-specific lipid-transfer protein1.8e-4073.11Show/hide
Query:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA
        M S L TI+KLGL +T   AVIGGGVTTEA VTCNQVVS LS CI YVTGGG+PS  CC GV+QLN  AQTT DRQ VC+CLKS++ GV YN QNVANAA
Subjt:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA

Query:  ALPAKCGVQLPYPINPNVD
        ALP KCGV LPY INPN D
Subjt:  ALPAKCGVQLPYPINPNVD

A0A5D3CEZ6 Non-specific lipid-transfer protein1.8e-4073.11Show/hide
Query:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA
        M S L TI+KLGL +T   AVIGGGVTTEA VTCNQVVS LS CI YVTGGG+PS  CC GV+QLN  AQTT DRQ VC+CLKS++ GV YN QNVANAA
Subjt:  MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAA

Query:  ALPAKCGVQLPYPINPNVD
        ALP KCGV LPY INPN D
Subjt:  ALPAKCGVQLPYPINPNVD

A0A6J1EBM4 Non-specific lipid-transfer protein4.4e-3465.77Show/hide
Query:  VKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGV
        VK+GL +   C +I GG  +EAAVTCNQVVS L +C+ YVTGGG PS+TCC GV+ LN +A T  DRQAVC CL+S+VKGV YNAQ +ANAAALPAKCGV
Subjt:  VKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGV

Query:  QLPYPINPNVD
        +LPY I+P  D
Subjt:  QLPYPINPNVD

A0A6J1HTX7 Non-specific lipid-transfer protein1.5e-3465.77Show/hide
Query:  VKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGV
        VK+GL +   C +I GG  +EAAVTCNQVVS L +C+ YVTGGGAPS+TCC GV+ LN +A T  DRQAVC CL+S+VKGV YNAQ +ANAAALPA+CGV
Subjt:  VKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGV

Query:  QLPYPINPNVD
        +LPY I+P +D
Subjt:  QLPYPINPNVD

SwissProt top hitse value%identityAlignment
A2ZAT0 Non-specific lipid-transfer protein 29.2e-2143.93Show/hide
Query:  LAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPY
        +A+     ++ G  TT AA++C QV S +S C+ Y  GG  PS+ CC GV+ LN  A TT DR+  C CLK+V   +  +  N  NAA++P+KCGV +PY
Subjt:  LAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPY

Query:  PINPNVD
         I+P++D
Subjt:  PINPNVD

Q2QYL2 Non-specific lipid-transfer protein 2B1.2e-2046.46Show/hide
Query:  VIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD
        ++ G  TT AA++C QV S +S C+ Y  GG  PS+ CC GV+ LN  A TT DR+  C CLK+V   +  +  N  NAA++P+KCGV +PY I+P++D
Subjt:  VIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD

Q43019 Non-specific lipid-transfer protein 32.3e-2445.76Show/hide
Query:  MSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAA
        M+    ++KL   +   C +  GG    AAV+C QVV+ L+ CI YV  GGA + +CC GV+ L  +AQTT DRQ++C CLK  V G+ Y   N   AA 
Subjt:  MSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAA

Query:  LPAKCGVQLPYPINPNVD
        LP KCGV +PY I+P+ D
Subjt:  LPAKCGVQLPYPINPNVD

Q43194 Non-specific lipid-transfer protein 24.6e-2045.22Show/hide
Query:  VKLGLAITFF---CAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTG-GGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPA
        +KL +AI       AV+    T+EAAVTC QV S +  C+ Y  G G  PS+ CC GV+ LN  A+TT DR+A C CLK+  +G++    NV  AA++P+
Subjt:  VKLGLAITFF---CAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTG-GGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPA

Query:  KCGVQLPYPINPNVD
        KCGV +PY I+ + D
Subjt:  KCGVQLPYPINPNVD

Q7XJ39 Non-specific lipid-transfer protein 2A9.2e-2143.93Show/hide
Query:  LAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPY
        +A+     ++ G  TT AA++C QV S +S C+ Y  GG  PS+ CC GV+ LN  A TT DR+  C CLK+V   +  +  N  NAA++P+KCGV +PY
Subjt:  LAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPY

Query:  PINPNVD
         I+P++D
Subjt:  PINPNVD

Arabidopsis top hitse value%identityAlignment
AT2G38540.1 lipid transfer protein 19.8e-1839.6Show/hide
Query:  CAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNV
        C ++ G +T+ AA++C  V S L++CI YV  GG     CC GVK LN +A+TT DRQ  C C++   + +  +  N   AA +P  CGV +PY I+ + 
Subjt:  CAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNV

Query:  D
        +
Subjt:  D

AT3G08770.1 lipid transfer protein 63.6e-2047.25Show/hide
Query:  EAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD
        EAAV+CN V++ L  C+ YVT GG   + CC G+  L   AQT+ DRQ VC+C+KS + G+  + + + NA  LP+KCGV LPY  +P+ D
Subjt:  EAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD

AT3G08770.2 lipid transfer protein 63.6e-2047.25Show/hide
Query:  EAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD
        EAAV+CN V++ L  C+ YVT GG   + CC G+  L   AQT+ DRQ VC+C+KS + G+  + + + NA  LP+KCGV LPY  +P+ D
Subjt:  EAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-1946.74Show/hide
Query:  TEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD
        +EAA++CN V + L  C+ YV  GGA   +CC G++ L+  A +  D+Q VC+C+KSVV  V Y++  +  AAALP KCGV+LPY I+P+ +
Subjt:  TEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQLPYPINPNVD

AT5G59310.1 lipid transfer protein 46.8e-1944.64Show/hide
Query:  LGLAITFF-CAVIGGGV--TTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCG
        +  A+ FF C V+   +  + +AA+TC  V S LS C+ Y++ GG     CC GVK+LN +AQTT DRQ  C+CL+S  KGV     N + A+ LP KCG
Subjt:  LGLAITFF-CAVIGGGV--TTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCG

Query:  VQLPYPINPNVD
        V +PYPI+ + +
Subjt:  VQLPYPINPNVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTAAGTTGAACACAATTGTAAAGTTGGGTTTGGCCATCACATTCTTCTGTGCCGTAATAGGTGGAGGGGTGACGACGGAGGCAGCCGTGACGTGCAACCAAGT
GGTCAGCCGTTTGAGTTCCTGTATTCAGTATGTGACCGGTGGAGGAGCCCCGTCGTCGACCTGTTGCTACGGTGTGAAACAGCTAAACATGGTGGCTCAGACGACGCAGG
ACCGACAAGCGGTATGTCAGTGCTTGAAATCAGTGGTGAAGGGAGTTAAGTATAATGCTCAAAACGTTGCTAATGCTGCTGCTCTTCCGGCCAAGTGCGGCGTCCAGCTT
CCCTACCCTATCAACCCCAATGTTGACTTATTAAAATGTGAGGAAAGTCAAGCAGCAACTCTAGTAGACGGCGTCGTATCAATGGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGTAAGTTGAACACAATTGTAAAGTTGGGTTTGGCCATCACATTCTTCTGTGCCGTAATAGGTGGAGGGGTGACGACGGAGGCAGCCGTGACGTGCAACCAAGT
GGTCAGCCGTTTGAGTTCCTGTATTCAGTATGTGACCGGTGGAGGAGCCCCGTCGTCGACCTGTTGCTACGGTGTGAAACAGCTAAACATGGTGGCTCAGACGACGCAGG
ACCGACAAGCGGTATGTCAGTGCTTGAAATCAGTGGTGAAGGGAGTTAAGTATAATGCTCAAAACGTTGCTAATGCTGCTGCTCTTCCGGCCAAGTGCGGCGTCCAGCTT
CCCTACCCTATCAACCCCAATGTTGACTTATTAAAATGTGAGGAAAGTCAAGCAGCAACTCTAGTAGACGGCGTCGTATCAATGGAAGAATAA
Protein sequenceShow/hide protein sequence
MMSKLNTIVKLGLAITFFCAVIGGGVTTEAAVTCNQVVSRLSSCIQYVTGGGAPSSTCCYGVKQLNMVAQTTQDRQAVCQCLKSVVKGVKYNAQNVANAAALPAKCGVQL
PYPINPNVDLLKCEESQAATLVDGVVSMEE