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Clc04G07020 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G07020
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmacrophage migration inhibitory factor homolog
Genome locationClcChr04:20675351..20676871
RNA-Seq ExpressionClc04G07020
SyntenyClc04G07020
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
GO:0050178 - phenylpyruvate tautomerase activity (molecular function)
InterPro domainsIPR001398 - Macrophage migration inhibitory factor
IPR014347 - Tautomerase/MIF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148599.1 macrophage migration inhibitory factor homolog [Cucumis sativus]7.3e-5093.75Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNVNLAG DSA IF+ATTTAVSSIIGKPENYVMVLL GSVPISFGGNG+PAAFAEVVSMGGINSEVKRRLIST+GSILNEKLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRP+SKL
Subjt:  HDTTAGRPVSKL

XP_008464238.1 PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo]5.6e-5093.75Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNVNLAG DSAAIF+ATTTAVSSIIGKPENYVMVLL GSVPISFGGNG+PA FAEVVSMGGINSEVKRRLIST+GSILNEKLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRP+SKL
Subjt:  HDTTAGRPVSKL

XP_022144090.1 macrophage migration inhibitory factor homolog [Momordica charantia]2.0e-4790.18Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNV+LAGAD+AAIF+ATTTAVSSIIGKPEN+VMVLLKGSV ISFGGNGEPAAFAEVVSMGGINS+VKR LISTI +ILN+KLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRP+SKL
Subjt:  HDTTAGRPVSKL

XP_022949815.1 macrophage migration inhibitory factor homolog [Cucurbita moschata]4.0e-4893.75Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNV+LAGADSAAIF ATT+AVSSIIGKPENYVMVLLKGSV ISFGGN EPAAFAEVVSMGGINSEVKRRLI+TIGSIL EKLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRPVSKL
Subjt:  HDTTAGRPVSKL

XP_038883562.1 macrophage migration inhibitory factor homolog [Benincasa hispida]2.3e-5196.43Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNVNLAGADS AIF+ATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLIST+GSILNEKLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRP+SKL
Subjt:  HDTTAGRPVSKL

TrEMBL top hitse value%identityAlignment
A0A0A0L1F7 Uncharacterized protein3.5e-5093.75Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNVNLAG DSA IF+ATTTAVSSIIGKPENYVMVLL GSVPISFGGNG+PAAFAEVVSMGGINSEVKRRLIST+GSILNEKLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRP+SKL
Subjt:  HDTTAGRPVSKL

A0A1S3CL09 macrophage migration inhibitory factor homolog2.7e-5093.75Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNVNLAG DSAAIF+ATTTAVSSIIGKPENYVMVLL GSVPISFGGNG+PA FAEVVSMGGINSEVKRRLIST+GSILNEKLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRP+SKL
Subjt:  HDTTAGRPVSKL

A0A6J1CQN7 macrophage migration inhibitory factor homolog9.6e-4890.18Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNV+LAGAD+AAIF+ATTTAVSSIIGKPEN+VMVLLKGSV ISFGGNGEPAAFAEVVSMGGINS+VKR LISTI +ILN+KLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRP+SKL
Subjt:  HDTTAGRPVSKL

A0A6J1GDU8 macrophage migration inhibitory factor homolog1.9e-4893.75Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNV+LAGADSAAIF ATT+AVSSIIGKPENYVMVLLKGSV ISFGGN EPAAFAEVVSMGGINSEVKRRLI+TIGSIL EKLSVPPARFFLKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRPVSKL
Subjt:  HDTTAGRPVSKL

A0A6J1IKS8 macrophage migration inhibitory factor homolog1.2e-4792.86Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYISTNV+LAGADSAAIF ATT+AVSSIIGKPENYVMVLLKGSV ISFGGN EPAAFAEVVSMGGINSEVKRRLI+TIGSIL EKLSVPPARF LKV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        HDTTAGRPVSKL
Subjt:  HDTTAGRPVSKL

SwissProt top hitse value%identityAlignment
P80177 Macrophage migration inhibitory factor5.7e-0527.62Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MP   ++TNV  A      + +  T  ++   GKP  Y+ V +     ++FGG+ EP A   + S+G I     R     +  +L E+L + P R ++  
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTA
         D  A
Subjt:  HDTTA

P81529 Macrophage migration inhibitory factor homolog1.6e-0732.65Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFL
        MP   ++TN+      S    ++T+  V +I+ KP +YV V +     +SFGG+ +PAAF  ++S+GGI     R   + +   LN+KL +P  R ++
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFL

P81748 Macrophage migration inhibitory factor homolog3.2e-0832.35Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MP    STNV      S     +T+  ++ ++GKPE+YV V + G   I+FGG   PA F +++S+GG+  E  R   + +   L + L +P  R ++  
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HD
         D
Subjt:  HD

P91850 Macrophage migration inhibitory factor homolog1.9e-0527.62Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MP   I TN+    + S+A     +  V+  +GKPE+YV + + G   + FGG+ +P A   + S+G +  +V       +  +L ++L +P  R +++ 
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTA
         D  A
Subjt:  HDTTA

Q1ZZU7 Macrophage migration inhibitory factor5.7e-0527.62Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MP   ++TNV  A      + +  T  ++   GKP  Y+ V +     ++FGG+ EP A   + S+G I     R     +  +L E+L + P R ++  
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTA
         D  A
Subjt:  HDTTA

Arabidopsis top hitse value%identityAlignment
AT3G51660.1 Tautomerase/MIF superfamily protein9.8e-2956.25Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCLYI+TNVN  G ++   ++  T AV+SI+G+P+N VMV+LKGSV I FGGN E AA+AE+VSMGGI  +VKR LI+T+GSIL+   S+ P RF  KV
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
         D  +    SKL
Subjt:  HDTTAGRPVSKL

AT5G01650.1 Tautomerase/MIF superfamily protein5.2e-3057.28Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCL +STNVNL G D+++I +  ++ V+ IIGKPENYVM++LKGSVP+SFGG  +PAA+ E+VS+GG+N++V ++L + + +IL  KLSVP +RFFLK 
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDT
        +DT
Subjt:  HDT

AT5G01650.2 Tautomerase/MIF superfamily protein5.2e-3057.28Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MPCL +STNVNL G D+++I +  ++ V+ IIGKPENYVM++LKGSVP+SFGG  +PAA+ E+VS+GG+N++V ++L + + +IL  KLSVP +RFFLK 
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDT
        +DT
Subjt:  HDT

AT5G57170.1 Tautomerase/MIF superfamily protein7.1e-1944.66Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MP L + TN+ +     + I    T AV+ IIGKPE+YVM+LL   VPI+F G  EPAA+ E++S+GG+   V  +L  TI  IL  KLS+  +RF++K 
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDT
        +D+
Subjt:  HDT

AT5G57170.2 Tautomerase/MIF superfamily protein2.4e-1944.64Show/hide
Query:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV
        MP L + TN+ +     + I    T AV+ IIGKPE+YVM+LL   VPI+F G  EPAA+ E++S+GG+   V  +L  TI  IL  KLS+  +RF++K 
Subjt:  MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKV

Query:  HDTTAGRPVSKL
        +D+    PVS L
Subjt:  HDTTAGRPVSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGCTGACTCCGCCGCCATCTTCACCGCCACTACCACCGCCGTCTCCTCCATTATCGGCAAACCAGAAAA
TTATGTGATGGTGTTGCTGAAAGGTTCGGTGCCGATATCATTCGGAGGGAACGGAGAACCGGCAGCATTCGCCGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTGA
AGAGGAGGCTGATCTCCACCATTGGAAGCATTTTGAATGAAAAGCTTTCAGTTCCGCCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCGTTTCC
AAATTATGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTTCCCTCTCTCTCCCCAAACTCAACCTCTCCTAATTCTCTATCTCCTTAGTCGCCATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGCTGACTC
CGCCGCCATCTTCACCGCCACTACCACCGCCGTCTCCTCCATTATCGGCAAACCAGAAAATTATGTGATGGTGTTGCTGAAAGGTTCGGTGCCGATATCATTCGGAGGGA
ACGGAGAACCGGCAGCATTCGCCGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTGAAGAGGAGGCTGATCTCCACCATTGGAAGCATTTTGAATGAAAAGCTTTCA
GTTCCGCCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCGTTTCCAAATTATGACTCTCCGGCGGCTGCCCTTTTTCACCTCTTCCAACTTTCAT
CTTTTTTTCTTTATAATTATTTCGTCTATTTCTCTGACTCTCTCTGTTTCTGTCTCTTGACAGTTAATTGGGAAAGTTTTTCAGTTTTTATTAATCATTATTATTATTTA
TAATATGTGGGTGAGAATCGAACTTTCAAC
Protein sequenceShow/hide protein sequence
MPCLYISTNVNLAGADSAAIFTATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAFAEVVSMGGINSEVKRRLISTIGSILNEKLSVPPARFFLKVHDTTAGRPVS
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