; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G07530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G07530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionjosephin-like protein
Genome locationClcChr04:21262360..21262907
RNA-Seq ExpressionClc04G07530
SyntenyClc04G07530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603596.1 hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4078.2Show/hide
Query:  MSTKLSSSRRVSFSSDQ-----AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKR---------SSSSSSSKNGSNFN
        MSTKLSSSRRVSFSSDQ     + AKP AFPRNRKRLITVFWVFRLPKS R  P  FLRR+GAKV KVLRYVSLRKR         SSSSSS K+GSNFN
Subjt:  MSTKLSSSRRVSFSSDQ-----AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKR---------SSSSSSSKNGSNFN

Query:  RSHSVSDSMEESHRAEAVKDCIKFFNSSNSSAV
        RSHSVS+SMEESHRAEAVKDCI FFNSS+SSAV
Subjt:  RSHSVSDSMEESHRAEAVKDCIKFFNSSNSSAV

KGN54361.1 hypothetical protein Csa_017994 [Cucumis sativus]5.7e-3780.65Show/hide
Query:  MSTKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSS-----KNGSN-FNRSHSVSDS
        MSTKLSS RRVSFSSDQA A   A  R RKR I VFWVFRLPKSARFSPEKFLRRLGAK+AKVLRYVSLRKRS+SS++S      NGS+ FNRSHSVSDS
Subjt:  MSTKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSS-----KNGSN-FNRSHSVSDS

Query:  MEESHRAEAVKDCIKFFNSSNSSA
        MEESHRAEAVKDCI+FFNSSNSS+
Subjt:  MEESHRAEAVKDCIKFFNSSNSSA

XP_022950374.1 josephin-like protein [Cucurbita moschata]8.5e-4179.69Show/hide
Query:  MSTKLSSSRRVSFSSDQ------AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS---SSSSSSKNGSNFNRSHSV
        MSTKLSSSRRVSFSSDQ      + AKP AFPRNRKRLITVFWVFRLPKS R  P  FLRR+GAKV KVLRYVSLRKRS   +SSSS K+GSNFNRSHSV
Subjt:  MSTKLSSSRRVSFSSDQ------AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS---SSSSSSKNGSNFNRSHSV

Query:  SDSMEESHRAEAVKDCIKFFNSSNSSAV
        S+SMEESHRAEAVKDCI FFNSS+SSA+
Subjt:  SDSMEESHRAEAVKDCIKFFNSSNSSAV

XP_022977351.1 uncharacterized protein LOC111477703 [Cucurbita maxima]9.4e-4079.53Show/hide
Query:  MSTKLSSSRRVSFSSDQ----AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS------SSSSSSKNGSNFNRSHS
        MSTKLSSSRRVSFSSDQ    A AKP AFPRNRKRLITVFWVF+LPKS R  P  FLRR+GAKV KVLRYVSLRKRS      SSSSS K+GSNFNRSHS
Subjt:  MSTKLSSSRRVSFSSDQ----AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS------SSSSSSKNGSNFNRSHS

Query:  VSDSMEESHRAEAVKDCIKFFNSSNSS
        VS+SMEESHRAEAVKDCI FFNSS+S+
Subjt:  VSDSMEESHRAEAVKDCIKFFNSSNSS

XP_023518083.1 uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]3.7e-3674.36Show/hide
Query:  TKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEESHRAE
        +K+ SSR VS  SD+  AKPT   RNRKR+ITV WVFRLPKS RFSPE FLRR+GAKVAKV+RYVSL+KRS  S  +   +NFNRSHSVSDSMEESHRAE
Subjt:  TKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEESHRAE

Query:  AVKDCIKFFNSSNSSAV
        AVKDCI FFNSS+SSAV
Subjt:  AVKDCIKFFNSSNSSAV

TrEMBL top hitse value%identityAlignment
A0A061EQH2 Uncharacterized protein2.3e-1547.5Show/hide
Query:  SSRRVSFSSDQAVAKPTAFPR----------NRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSME
        +S+RVSFS D    +PT   +          NR+R++   + FRL +S+RFSP + LRRLGAKVA+ LR+VS+R+ S+S   S + SN  RS S+++S+ 
Subjt:  SSRRVSFSSDQAVAKPTAFPR----------NRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSME

Query:  ESHRAEAVKDCIKFFNSSNS
        +SHRAEA++DCI+F NSS+S
Subjt:  ESHRAEAVKDCIKFFNSSNS

A0A0A0L2K7 Uncharacterized protein2.8e-3780.65Show/hide
Query:  MSTKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSS-----KNGSN-FNRSHSVSDS
        MSTKLSS RRVSFSSDQA A   A  R RKR I VFWVFRLPKSARFSPEKFLRRLGAK+AKVLRYVSLRKRS+SS++S      NGS+ FNRSHSVSDS
Subjt:  MSTKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSS-----KNGSN-FNRSHSVSDS

Query:  MEESHRAEAVKDCIKFFNSSNSSA
        MEESHRAEAVKDCI+FFNSSNSS+
Subjt:  MEESHRAEAVKDCIKFFNSSNSSA

A0A2N9FAM8 Uncharacterized protein2.5e-1451.26Show/hide
Query:  SSRRVSFSSDQAVAKPTAFPRN---------RKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEE
        +S+RVSFS D    KPT F ++         RKR+I V W FRLPK + FSP KFL+RL AKV   +R++S+R+R     S K  S+  RSHSVSD M +
Subjt:  SSRRVSFSSDQAVAKPTAFPRN---------RKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEE

Query:  SHRAEAVKDCIKFFNSSNS
        SHRAEA++DCI+F NSS++
Subjt:  SHRAEAVKDCIKFFNSSNS

A0A6J1GFL9 josephin-like protein4.1e-4179.69Show/hide
Query:  MSTKLSSSRRVSFSSDQ------AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS---SSSSSSKNGSNFNRSHSV
        MSTKLSSSRRVSFSSDQ      + AKP AFPRNRKRLITVFWVFRLPKS R  P  FLRR+GAKV KVLRYVSLRKRS   +SSSS K+GSNFNRSHSV
Subjt:  MSTKLSSSRRVSFSSDQ------AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS---SSSSSSKNGSNFNRSHSV

Query:  SDSMEESHRAEAVKDCIKFFNSSNSSAV
        S+SMEESHRAEAVKDCI FFNSS+SSA+
Subjt:  SDSMEESHRAEAVKDCIKFFNSSNSSAV

A0A6J1IJN3 uncharacterized protein LOC1114777034.6e-4079.53Show/hide
Query:  MSTKLSSSRRVSFSSDQ----AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS------SSSSSSKNGSNFNRSHS
        MSTKLSSSRRVSFSSDQ    A AKP AFPRNRKRLITVFWVF+LPKS R  P  FLRR+GAKV KVLRYVSLRKRS      SSSSS K+GSNFNRSHS
Subjt:  MSTKLSSSRRVSFSSDQ----AVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRS------SSSSSSKNGSNFNRSHS

Query:  VSDSMEESHRAEAVKDCIKFFNSSNSS
        VS+SMEESHRAEAVKDCI FFNSS+S+
Subjt:  VSDSMEESHRAEAVKDCIKFFNSSNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07300.1 josephin protein-related1.9e-0635.64Show/hide
Query:  AVAKPTAF--PRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEESHRAEAVKDCIKFFNSSN
        A AK TA   P  +    T     RLP+    +  K ++ LG K AK LR V +RK+  S  S  +  +      +     +SHR+EA++DCI+F NSS+
Subjt:  AVAKPTAF--PRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEESHRAEAVKDCIKFFNSSN

Query:  S
        S
Subjt:  S

AT3G09032.1 unknown protein3.5e-0833.07Show/hide
Query:  RRVSFSSDQAVAKPTAFPR--------NRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKR-------------SSSSSSSKNGSNFNR
        +RVSF+ +        FP+        + +R + +  +      +  +  K ++R+GA+ AK LR++S R+              SSSSSSS +     R
Subjt:  RRVSFSSDQAVAKPTAFPR--------NRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKR-------------SSSSSSSKNGSNFNR

Query:  SHSVSDSMEESHRAEAVKDCIKFFNSS
        S SV+++  ESHRAEA++DCI+F NSS
Subjt:  SHSVSDSMEESHRAEAVKDCIKFFNSS

AT5G01225.1 unknown protein5.0e-0734.45Show/hide
Query:  SSRRVSFSSDQAVAKPTAFP------RNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVS---LRKRSSSSSSSKNGSNFNRSHSVSDSMEE
        +S+RV FS D        FP        R+R++   + F    S   + ++ LR +G +V K  RY+S   +  +++ SSSS   S+     S S +  E
Subjt:  SSRRVSFSSDQAVAKPTAFP------RNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVS---LRKRSSSSSSSKNGSNFNRSHSVSDSMEE

Query:  SHRAEAVKDCIKFFNSSNS
        SHRAEA++DCI+F NS +S
Subjt:  SHRAEAVKDCIKFFNSSNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTG
GGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGAAAAGTTCCTCCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGT
CGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCATAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTC
TTCAACTCTTCAAATTCTTCAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
CAGCTAGCTAACTTAAAGGCAGCTAAAAAAACACCTTCTCATCTCATGTCTCTTTTTCACTCACTCCTAAATTACTCCTTTTTCCTTCTCTCCTCAAATACCAAACCAAA
TCCAATTGAATCTCAAAATAAATTCTCAAAAATCCCCCCCAAAAAGAATTAAAAAAAAAATTTTTTAAAAAATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTC
AGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTGGGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGA
AAAGTTCCTCCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGTCGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATA
GATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCATAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTCTTCAACTCTTCAAATTCTTCAGCTGTTTGATTTTTTT
Protein sequenceShow/hide protein sequence
MSTKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEESHRAEAVKDCIKF
FNSSNSSAV