; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G07730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G07730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-CH-type domain-containing protein
Genome locationClcChr04:21506634..21507875
RNA-Seq ExpressionClc04G07730
SyntenyClc04G07730
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595366.1 hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6175.6Show/hide
Query:  MAALETAGADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM
        MAALETAG DLE+  +       AE     GEVKV  ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV 
Subjt:  MAALETAGADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM

Query:  VAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        V HE EQ EQ+H  NNGT+ST TVAASVAA+P GGR FW VHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  VAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

KAG7027374.1 hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]7.3e-6275.6Show/hide
Query:  MAALETAGADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM
        MAALETAG DLE+            RG+  GEVKV  ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV 
Subjt:  MAALETAGADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM

Query:  VAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        V HE EQ EQ+H  NNGT+ST TVAASVAA+P GGR FW VHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  VAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_022151515.1 uncharacterized protein LOC111019441, partial [Momordica charantia]3.2e-5769.82Show/hide
Query:  MAALETAG-ADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNV
        +AA++T G ADLE+              SG    +   ERDCRICHLGLES+S E G+GIELGC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV
Subjt:  MAALETAG-ADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNV

Query:  MVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        + AHE E  EQ+  SNN TVST TVA SV   P+GGRSFW VHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  MVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_023517920.1 uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]1.8e-6075Show/hide
Query:  MAALETAGADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM
        MAALETAG DLE+  +       AE     GEVKV  ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV 
Subjt:  MAALETAGADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM

Query:  VAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
          HE EQ EQ+H  NNGT+ST TVAASV AAP GGR FW VHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  VAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_038883458.1 uncharacterized protein LOC120074413 [Benincasa hispida]1.3e-7487.06Show/hide
Query:  MAALETAGADLEKEWQRAAAAATAERGSGFG-EVKV-KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRN
        MAALETAGADLEK W++ A    AERGSG G EVKV  LERDCRICHLGL SNS+EFGVGIELGCCCKNDL  AHKHCAEAWFKIRGNKTCEICHSIVRN
Subjt:  MAALETAGADLEKEWQRAAAAATAERGSGFG-EVKV-KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRN

Query:  VMVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        VMV  E EQTEQ+H SNNGTVSTATVAASVAA PSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  VMVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

TrEMBL top hitse value%identityAlignment
A0A0B0MSH9 E3 ubiquitin-protein ligase MARCH29.0e-5071.53Show/hide
Query:  SGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV
        SG  E+K+   K+E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E E TEQ + +N+   STAT 
Subjt:  SGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV

Query:  AASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A S AA+ +  RSFWH HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A2P5YEN9 RING-CH-type domain-containing protein9.0e-5071.53Show/hide
Query:  SGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV
        SG  E+K+   K+E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E E TEQ + +N+   STAT 
Subjt:  SGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV

Query:  AASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A S AA+ +  RSFWH HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6A3CP99 Laccase-8-like6.9e-5071.53Show/hide
Query:  SGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV
        SG  E+KV   K E++CRICHLGLESNS E GV IELGC CK+DL  AHKHCAEAWFKIRGNKTCEICHSI RNV++A+E E  EQ + +N+   STAT 
Subjt:  SGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV

Query:  AASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A S AA+ S  RSFWH HR LNFLLACMVFAFVISWLFHF+VPS
Subjt:  AASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1CWG7 uncharacterized protein LOC111015024 isoform X26.9e-5070.75Show/hide
Query:  ERGSGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVST
        E  +G  E+KV   K+ERDCRICHLGLESNS E G+ IELGC CK+DL AAHKHCAE WFKIRGNKTCEICHSI RN++  HE E TEQ   SNN + ST
Subjt:  ERGSGFGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVST

Query:  ATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A VAAS+ ++ S  +SFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  ATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1DBE4 uncharacterized protein LOC1110194411.5e-5769.82Show/hide
Query:  MAALETAG-ADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNV
        +AA++T G ADLE+              SG    +   ERDCRICHLGLES+S E G+GIELGC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV
Subjt:  MAALETAG-ADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNV

Query:  MVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        + AHE E  EQ+  SNN TVST TVA SV   P+GGRSFW VHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  MVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein2.2e-1653.52Show/hide
Query:  ERDCRICHLGLESNSSEFGVG-------IELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        ER CRICH G + +    G         IE+GC CKN+LG AH HCAEAWFK+RGN  CEIC    +NV V
Subjt:  ERDCRICHLGLESNSSEFGVG-------IELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein2.7e-3050Show/hide
Query:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEF-EQTEQVHGSNNGTVSTATVAASVAAAPSGGR
        E+DCRICHLG+E++    G  IELGC CK+DL  AH+ CAE WFKI+G+KTCEIC S+ RNV  A+E    T +     NG           AA   GG 
Subjt:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEF-EQTEQVHGSNNGTVSTATVAASVAAAPSGGR

Query:  SF----WHVHRVLNFLLACMVFAFVISWLFHFNVPS
        +     W   RV+N +LACMVF F ISW+FHF+V S
Subjt:  SF----WHVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein2.6e-3349.38Show/hide
Query:  DLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM-VAHEFEQT
        DL+ E    + A+ + RGS         E+DCRICHLGLES+  E G  + LGC CK+DLG  HK CA+ WFKI+GNKTCEIC SI +N   V +E  QT
Subjt:  DLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM-VAHEFEQT

Query:  EQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
             +N   V        VA + S  R     +R LNFLL CMV AFVISW FHFN+PS
Subjt:  EQVHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein1.4e-3961.83Show/hide
Query:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRS
        ERDCRICH+ L++ + E GV IELGC CK DL AAHKHCAE WFKI+GNK CE+C SI  NV+ + E E  E  + +N   V   T+  S       GRS
Subjt:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATVAASVAAAPSGGRS

Query:  FWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        FW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  FWHVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein1.1e-2641.07Show/hide
Query:  KVKLERDCRICHLGLESNSSE-------------------------------FGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        K K  RDCRICHL LE+N                                  +G+ ++LGC CK DLG AH  CAE WFKI+GN TCEIC ++  NV   
Subjt:  KVKLERDCRICHLGLESNSSE-------------------------------FGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HEFEQTEQVHGSNNGTVSTATVAASVAAAPS----GGRSFWHVHRVLNFLLACMVFAFVISWLFHFNV
                  G  +   STA+  +  AA  S      R  WH   V+NFLLA MVFAFV+SWLFHF V
Subjt:  HEFEQTEQVHGSNNGTVSTATVAASVAAAPS----GGRSFWHVHRVLNFLLACMVFAFVISWLFHFNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTTAGAGACGGCCGGAGCTGATTTGGAGAAAGAGTGGCAGCGGGCGGCGGCGGCGGCAACGGCGGAGAGGGGAAGTGGATTTGGTGAAGTGAAGGTGAAGTT
GGAGAGAGATTGTAGGATTTGCCATTTGGGTTTAGAGAGCAATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCCCACA
AGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAATTTGAACAAACGGAGCAA
GTCCATGGGTCGAACAATGGGACGGTATCAACGGCCACGGTTGCAGCATCGGTGGCTGCCGCTCCTAGTGGTGGCCGGAGCTTTTGGCATGTTCACCGAGTCCTTAATTT
TCTTCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTTCATTTCAATGTGCCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTTTAGAGACGGCCGGAGCTGATTTGGAGAAAGAGTGGCAGCGGGCGGCGGCGGCGGCAACGGCGGAGAGGGGAAGTGGATTTGGTGAAGTGAAGGTGAAGTT
GGAGAGAGATTGTAGGATTTGCCATTTGGGTTTAGAGAGCAATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCCCACA
AGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAATTTGAACAAACGGAGCAA
GTCCATGGGTCGAACAATGGGACGGTATCAACGGCCACGGTTGCAGCATCGGTGGCTGCCGCTCCTAGTGGTGGCCGGAGCTTTTGGCATGTTCACCGAGTCCTTAATTT
TCTTCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTTCATTTCAATGTGCCATCATAA
Protein sequenceShow/hide protein sequence
MAALETAGADLEKEWQRAAAAATAERGSGFGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQ
VHGSNNGTVSTATVAASVAAAPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS