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Clc04G07920 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G07920
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:21665710..21666113
RNA-Seq ExpressionClc04G07920
SyntenyClc04G07920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448606.1 PREDICTED: probable glutathione S-transferase [Cucumis melo]5.6e-0538.79Show/hide
Query:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP
        D KVV  + K   SKGEE+EKAVEEVK ALEPLEKEL                                                  EL+N+NVVKEL+P
Subjt:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP

Query:  KKDEVVAFVQAIFSKN
        KKD++VA  + I  KN
Subjt:  KKDEVVAFVQAIFSKN
XP_011653660.1 glutathione S-transferase U8 [Cucumis sativus]8.1e-0436.21Show/hide
Query:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP
        D KVV A+ K   SKGE IE+AVEE K ALEPLEKEL                                                  EL+N NVVKEL+P
Subjt:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP

Query:  KKDEVVAFVQAIFSKN
        KKD++V  ++ +  KN
Subjt:  KKDEVVAFVQAIFSKN
TrEMBL top hitse value%identityAlignment
A0A0A0KZS0 Uncharacterized protein3.9e-0436.21Show/hide
Query:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP
        D KVV A+ K   SKGE IE+AVEE K ALEPLEKEL                                                  EL+N NVVKEL+P
Subjt:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP

Query:  KKDEVVAFVQAIFSKN
        KKD++V  ++ +  KN
Subjt:  KKDEVVAFVQAIFSKN
A0A1S3BJG8 probable glutathione S-transferase2.7e-0538.79Show/hide
Query:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP
        D KVV  + K   SKGEE+EKAVEEVK ALEPLEKEL                                                  EL+N+NVVKEL+P
Subjt:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP

Query:  KKDEVVAFVQAIFSKN
        KKD++VA  + I  KN
Subjt:  KKDEVVAFVQAIFSKN
A0A5D3DJF9 Putative glutathione S-transferase2.7e-0538.79Show/hide
Query:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP
        D KVV  + K   SKGEE+EKAVEEVK ALEPLEKEL                                                  EL+N+NVVKEL+P
Subjt:  DFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKEL--------------------------------------------------ELSNHNVVKELLP

Query:  KKDEVVAFVQAIFSKN
        KKD++VA  + I  KN
Subjt:  KKDEVVAFVQAIFSKN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTTCAAGGTTGTACCTGCGATAGTGAAAGCTGTTGAAAGCAAAGGAGAAGAGATAGAGAAGGCTGTGGAAGAAGTGAAGGGGGCATTGGAACCACTTGAGAA
AGAATTGGAGCTTTCCAACCACAACGTGGTGAAGGAGCTTCTGCCTAAAAAGGATGAGGTTGTTGCCTTTGTGCAAGCTATTTTCTCCAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACTTCAAGGTTGTACCTGCGATAGTGAAAGCTGTTGAAAGCAAAGGAGAAGAGATAGAGAAGGCTGTGGAAGAAGTGAAGGGGGCATTGGAACCACTTGAGAA
AGAATTGGAGCTTTCCAACCACAACGTGGTGAAGGAGCTTCTGCCTAAAAAGGATGAGGTTGTTGCCTTTGTGCAAGCTATTTTCTCCAAGAATTAA
Protein sequenceShow/hide protein sequence
MADFKVVPAIVKAVESKGEEIEKAVEEVKGALEPLEKELELSNHNVVKELLPKKDEVVAFVQAIFSKN