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Clc04G07960 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G07960
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationClcChr04:21695343..21697189
RNA-Seq ExpressionClc04G07960
SyntenyClc04G07960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147915.1 uncharacterized protein LOC101215701 isoform X1 [Cucumis sativus]1.6e-7190.51Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGS ETSYSSTTGIFGSIFAPSSKVLGR++LLS TKE ER SVNEPW PNA AQDD AN TQKESQE KNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
        RAQPCHLSSSIYYGG DVYTHPQNS+NSG NSAYKKEGGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

XP_008448572.1 PREDICTED: uncharacterized protein LOC103490707 isoform X1 [Cucumis melo]6.6e-7391.77Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGS ETSYSSTTGIFGSIFAPSSKVLGR++LLSQTKE ER SVNEPW PNAEAQDD AN TQKESQEMKNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
         AQPCHLSSSIYYGG DVYTHPQNS+NSG NSAYKKEGGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

XP_008448581.1 PREDICTED: uncharacterized protein LOC103490707 isoform X2 [Cucumis melo]3.1e-7090.97Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGS ETSYSSTTGIFGSIFAPSSKVLGR++LLSQTKE ER SVNEPW PNAEAQDD AN TQKESQEMKNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGS
         AQPCHLSSSIYYGG DVYTHPQNS+NSG NSAYKKEGGEDDSGSASRGNWWQG+
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGS

XP_038882075.1 uncharacterized protein LOC120073353 isoform X1 [Benincasa hispida]1.1e-7594.94Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRD+LLSQTKEGER SVNEPWIPNAEAQDDTAN TQKES EMKNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
        RAQPCHLSSSIYYGG DVYTHPQNS+NS VNSAYKKEGGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

XP_038882076.1 uncharacterized protein LOC120073353 isoform X2 [Benincasa hispida]4.3e-7292.41Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRD+LLSQTKEGER SVNEPWIPNAEAQDDTAN TQKES EMKNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
        RAQPCHLSSSIYYGG DVYTHPQNS+    NS YKKEGGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

TrEMBL top hitse value%identityAlignment
A0A0A0L143 Uncharacterized protein7.9e-7290.51Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGS ETSYSSTTGIFGSIFAPSSKVLGR++LLS TKE ER SVNEPW PNA AQDD AN TQKESQE KNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
        RAQPCHLSSSIYYGG DVYTHPQNS+NSG NSAYKKEGGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

A0A1S3BK03 uncharacterized protein LOC103490707 isoform X21.5e-7090.97Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGS ETSYSSTTGIFGSIFAPSSKVLGR++LLSQTKE ER SVNEPW PNAEAQDD AN TQKESQEMKNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGS
         AQPCHLSSSIYYGG DVYTHPQNS+NSG NSAYKKEGGEDDSGSASRGNWWQG+
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGS

A0A1S3BKM1 uncharacterized protein LOC103490707 isoform X13.2e-7391.77Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGS ETSYSSTTGIFGSIFAPSSKVLGR++LLSQTKE ER SVNEPW PNAEAQDD AN TQKESQEMKNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
         AQPCHLSSSIYYGG DVYTHPQNS+NSG NSAYKKEGGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

A0A5D3DIY4 Uncharacterized protein3.2e-7391.77Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKKHVGLGSSSSSLTTDLFGS ETSYSSTTGIFGSIFAPSSKVLGR++LLSQTKE ER SVNEPW PNAEAQDD AN TQKESQEMKNKD+SSIYQDQ
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
         AQPCHLSSSIYYGG DVYTHPQNS+NSG NSAYKKEGGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

A0A6J1DDV5 uncharacterized protein LOC1110194803.2e-6584.81Show/hide
Query:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ
        MEGKK +G   SSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLG ++LLSQ KEGER SVNEPWIPN EA+DD AN  QKESQEMKNKDLSSIYQ+Q
Subjt:  MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQ

Query:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
        RAQPCHLSSSIYYGG DVY+  QNSHNSGVNS +KK+GGEDDSGSASRGNWWQGSLYY
Subjt:  RAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein1.0e-1542.24Show/hide
Query:  MEGKKHVGLGSSSSSLTTD-LFGSKET-SY-SSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIY
        M+ KK V   SSSSS + D +FG + + SY SSTTG+F SIF P S V           +G   S N      A+ Q        +  +  KNK+  S  
Subjt:  MEGKKHVGLGSSSSSLTTD-LFGSKET-SY-SSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIY

Query:  QDQRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
         ++   PC+LSSSIYYGG D Y     S ++    AYKK+G E DS SASRGNWW+GS  Y
Subjt:  QDQRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

AT3G55646.1 unknown protein1.4e-1740.25Show/hide
Query:  KKHVGLGSSSSSLTT--DLFGSK--ETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQD
        KK V   SSSSSL++   +FG +   +S SS TG+F SIF P S     D L  Q     +G   +   PNA            + +    K+  S Y +
Subjt:  KKHVGLGSSSSSLTT--DLFGSK--ETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQD

Query:  QRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
        +   PCHLSSS+YYGG + Y    +S  +  +  YKK+G E DS  ASRGNWW+GSLYY
Subjt:  QRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).5.4e-3354.94Show/hide
Query:  MEGKKHVGLGS---SSSSLTTDLFGSKET-SYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSI
        MEG+K     S   SSSSLT++LFGS+E  S  S++GI GSIF P SKVLGR+++  +T  G  G  N       E    T  +  +  ++ +N   S  
Subjt:  MEGKKHVGLGS---SSSSLTTDLFGSKET-SYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSI

Query:  YQDQRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY
         QDQR QPCHLSSSIYYGGPDVY  PQNS +   NS  KK+GGEDDSGSASRGNWWQGSLYY
Subjt:  YQDQRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY

AT5G02020.2 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).2.0e-1949.61Show/hide
Query:  MEGKKHVGLGS---SSSSLTTDLFGSKET-SYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSI
        MEG+K     S   SSSSLT++LFGS+E  S  S++GI GSIF P SKVLGR+++  +T  G  G  N       E    T  +  +  ++ +N   S  
Subjt:  MEGKKHVGLGS---SSSSLTTDLFGSKET-SYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSI

Query:  YQDQRAQPCHLSSSIYYGGPDVYTHPQNS
         QDQR QPCHLSSSIYYGGPDVY  PQNS
Subjt:  YQDQRAQPCHLSSSIYYGGPDVYTHPQNS

AT5G59080.1 unknown protein7.1e-1740Show/hide
Query:  MEGKKHVGLGSS-SSSLTTDLFGSKETS-YSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQ
        MEGK  VG  SS SSS T +LFGSK+ S  SS++GIF ++F   SK   RD   S +K G                          SQ  + + L++  Q
Subjt:  MEGKKHVGLGSS-SSSLTTDLFGSKETS-YSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQ

Query:  DQRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSG-----SASRGNWWQGSLYY
        + R +PCHLSSS+YYGG DVY     +         ++  GEDD+        SRGNWWQGSLYY
Subjt:  DQRAQPCHLSSSIYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSG-----SASRGNWWQGSLYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAAAGAAGCATGTGGGTCTTGGATCCTCTTCTTCTTCTCTCACTACTGACCTCTTTGGCTCCAAAGAAACTTCCTATTCTTCCACCACTGGGATTTTTGGCTC
CATTTTTGCACCTTCTTCCAAGGTGTTAGGAAGAGACACTCTGCTCTCTCAGACCAAAGAGGGAGAGAGGGGTTCTGTAAATGAGCCATGGATCCCCAACGCTGAAGCTC
AAGATGATACTGCTAATGATACACAAAAGGAGAGTCAGGAGATGAAGAATAAGGATTTGAGTTCCATTTATCAGGATCAAAGAGCACAACCATGTCATCTTAGCTCATCA
ATCTATTATGGGGGCCCAGATGTTTATACTCATCCTCAGAATTCCCACAATTCCGGGGTGAACTCTGCTTACAAGAAGGAAGGGGGAGAAGATGATTCTGGGAGTGCTTC
AAGAGGAAATTGGTGGCAAGGATCTCTCTATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAAAGAAGCATGTGGGTCTTGGATCCTCTTCTTCTTCTCTCACTACTGACCTCTTTGGCTCCAAAGAAACTTCCTATTCTTCCACCACTGGGATTTTTGGCTC
CATTTTTGCACCTTCTTCCAAGGTGTTAGGAAGAGACACTCTGCTCTCTCAGACCAAAGAGGGAGAGAGGGGTTCTGTAAATGAGCCATGGATCCCCAACGCTGAAGCTC
AAGATGATACTGCTAATGATACACAAAAGGAGAGTCAGGAGATGAAGAATAAGGATTTGAGTTCCATTTATCAGGATCAAAGAGCACAACCATGTCATCTTAGCTCATCA
ATCTATTATGGGGGCCCAGATGTTTATACTCATCCTCAGAATTCCCACAATTCCGGGGTGAACTCTGCTTACAAGAAGGAAGGGGGAGAAGATGATTCTGGGAGTGCTTC
AAGAGGAAATTGGTGGCAAGGATCTCTCTATTATTAG
Protein sequenceShow/hide protein sequence
MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDTLLSQTKEGERGSVNEPWIPNAEAQDDTANDTQKESQEMKNKDLSSIYQDQRAQPCHLSSS
IYYGGPDVYTHPQNSHNSGVNSAYKKEGGEDDSGSASRGNWWQGSLYY