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Clc04G07985 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G07985
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:21753024..21753509
RNA-Seq ExpressionClc04G07985
SyntenyClc04G07985
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2559.06Show/hide
Query:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV
        M PFLFLLFIF +ALL+S +V A P       PS RKLG H SAA V  SPSEAP+SE+KV                      N EHHKSRD SIAGGGV
Subjt:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV

Query:  ILGGFATTFLVAIICYIRATRRQKAEV
        ILGG ATTF VAIICYIRAT+RQ +EV
Subjt:  ILGGFATTFLVAIICYIRATRRQKAEV

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]9.4e-5177.93Show/hide
Query:  MSDPKTLFISNRLNSVNRTSKNMPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNE
        MSDP+ LFIS+  NSVNRTSK M PFLFLLFIF NALL SV+VGAAPPPT+AE PSGRKLGKHHS AVVF SPSEAPRSE KV      + A+ GG+GNE
Subjt:  MSDPKTLFISNRLNSVNRTSKNMPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNE

Query:  IQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRQ
        I+LE NHEHHKS DKS+AGGGVILGG ATTFLVAI+CYIRATRRQ
Subjt:  IQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRQ

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]3.2e-4375.19Show/hide
Query:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV
        +PPFLFLLFIF NAL +S++  AAPPPTSAESPS RKLGKH S A+ F SP+EAPRS MKVQGTS    ASGG SGN ++L  NH+HHKSRDKSIAGGGV
Subjt:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV

Query:  ILGGFATTFLVAIICYIRATRRQKAEVNS
        ILGG ATTFLVA+ICYIRATRRQK+E+ S
Subjt:  ILGGFATTFLVAIICYIRATRRQKAEVNS

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]6.5e-4477.52Show/hide
Query:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV
        +PPFLFLLFIF NA  +S++  AAPPPTSAESPS RKLGKH S A+ F SP EAPRSEMKVQGTS   AASGG SGN +QL  NH+HHKSRDKSIAGGGV
Subjt:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV

Query:  ILGGFATTFLVAIICYIRATRRQKAEVNS
        ILGG ATTFLVAIICYIRATRRQK+E+ S
Subjt:  ILGGFATTFLVAIICYIRATRRQKAEVNS

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]4.9e-3165.44Show/hide
Query:  MPPFLFLLFIFVNALLNSVSV-----GAAPPP--TSAESPSGRKLGKHHSAAVVF--LSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSR
        M  FLF+LFIF NA LNSV V     GAAP P  T AE+PS RKLGKH SAA V    SPSEAPRSEMKVQ TSAAA   G         ++ H +HK+ 
Subjt:  MPPFLFLLFIFVNALLNSVSV-----GAAPPP--TSAESPSGRKLGKHHSAAVVF--LSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSR

Query:  DKSIAGGGVILGGFATTFLVAIICYIRATRRQKAEV
        DKSIAGGGVILGG ATTFLVAIICYIRATRR  +EV
Subjt:  DKSIAGGGVILGGFATTFLVAIICYIRATRRQKAEV

TrEMBL top hitse value%identityAlignment
A0A061ERA0 Uncharacterized protein1.1e-1547.2Show/hide
Query:  PTSAESPSGRKLGKHHSAAVVFL------SPSEAPRSEMKVQ--------GTSAAAAASGGGSGNEIQLENNH--EHHKSRDKSIAGGGVILGGFATTFL
        PT+AE+P+ RKLGKH    V         SPS+AP+ E  +         G +AA      G    ++ +  H  +HH+S DKS+AGGGVILGG ATTFL
Subjt:  PTSAESPSGRKLGKHHSAAVVFL------SPSEAPRSEMKVQ--------GTSAAAAASGGGSGNEIQLENNH--EHHKSRDKSIAGGGVILGGFATTFL

Query:  VAIICYIRATRRQKAEVN-SAFETT
        VA+ICYIRAT R K+E + S  ETT
Subjt:  VAIICYIRATRRQKAEVN-SAFETT

A0A0A0KXQ0 Uncharacterized protein1.6e-4375.19Show/hide
Query:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV
        +PPFLFLLFIF NAL +S++  AAPPPTSAESPS RKLGKH S A+ F SP+EAPRS MKVQGTS    ASGG SGN ++L  NH+HHKSRDKSIAGGGV
Subjt:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV

Query:  ILGGFATTFLVAIICYIRATRRQKAEVNS
        ILGG ATTFLVA+ICYIRATRRQK+E+ S
Subjt:  ILGGFATTFLVAIICYIRATRRQKAEVNS

A0A1S3BJV8 uncharacterized protein LOC1034906753.2e-4477.52Show/hide
Query:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV
        +PPFLFLLFIF NA  +S++  AAPPPTSAESPS RKLGKH S A+ F SP EAPRSEMKVQGTS   AASGG SGN +QL  NH+HHKSRDKSIAGGGV
Subjt:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV

Query:  ILGGFATTFLVAIICYIRATRRQKAEVNS
        ILGG ATTFLVAIICYIRATRRQK+E+ S
Subjt:  ILGGFATTFLVAIICYIRATRRQKAEVNS

A0A5A7TSM2 Uncharacterized protein3.2e-4477.52Show/hide
Query:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV
        +PPFLFLLFIF NA  +S++  AAPPPTSAESPS RKLGKH S A+ F SP EAPRSEMKVQGTS   AASGG SGN +QL  NH+HHKSRDKSIAGGGV
Subjt:  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGV

Query:  ILGGFATTFLVAIICYIRATRRQKAEVNS
        ILGG ATTFLVAIICYIRATRRQK+E+ S
Subjt:  ILGGFATTFLVAIICYIRATRRQKAEVNS

A0A6J1DCH7 uncharacterized protein LOC1110194722.4e-3165.44Show/hide
Query:  MPPFLFLLFIFVNALLNSVSV-----GAAPPP--TSAESPSGRKLGKHHSAAVVF--LSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSR
        M  FLF+LFIF NA LNSV V     GAAP P  T AE+PS RKLGKH SAA V    SPSEAPRSEMKVQ TSAAA   G         ++ H +HK+ 
Subjt:  MPPFLFLLFIFVNALLNSVSV-----GAAPPP--TSAESPSGRKLGKHHSAAVVF--LSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSR

Query:  DKSIAGGGVILGGFATTFLVAIICYIRATRRQKAEV
        DKSIAGGGVILGG ATTFLVAIICYIRATRR  +EV
Subjt:  DKSIAGGGVILGGFATTFLVAIICYIRATRRQKAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.7e-1040.59Show/hide
Query:  APPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRQ
        A   + AE P+ RKLG+H           E P  E +    S            E  +   H HH + ++S+AGGGVILGG ATTFLV + CYIRATR+ 
Subjt:  APPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRQ

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATCCAAAAACCCTATTTATTTCCAATCGCCTAAACTCTGTAAATCGCACCTCCAAAAATATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCT
TCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACAGTGCGGCGGTTGTTTTTTTGAGTCCGT
CTGAAGCGCCACGAAGCGAAATGAAAGTTCAGGGGACCTCGGCGGCGGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCAT
AAGTCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACAGAAAGC
AGAAGTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATCCAAAAACCCTATTTATTTCCAATCGCCTAAACTCTGTAAATCGCACCTCCAAAAATATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCT
TCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACAGTGCGGCGGTTGTTTTTTTGAGTCCGT
CTGAAGCGCCACGAAGCGAAATGAAAGTTCAGGGGACCTCGGCGGCGGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCAT
AAGTCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACAGAAAGC
AGAAGTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG
Protein sequenceShow/hide protein sequence
MSDPKTLFISNRLNSVNRTSKNMPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHH
KSRDKSIAGGGVILGGFATTFLVAIICYIRATRRQKAEVNSAFETTCRPRC