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Clc04G08200 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G08200
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:21966225..21968965
RNA-Seq ExpressionClc04G08200
SyntenyClc04G08200
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTCTCAATACTCCAACAGCTTCTAGCTCGAAGGAGTCTGATTCGAGGGGGTTGTGGAGCTCTTTATTCAATAATCCCCCTTCTAATGCCAAATCAATCATGCT
TCAAGTTGAAAAATCTCAGATGGTGTTCAAGCGTGGCAAATCTGATTGGATTATTCCGGATTGGAATGGTCACTTGATTGGTGGTAGCTTTAACTTCTCCACTTCTTGTT
GGCCAGTGAAAGTTTTAGAAGCTAAGGCCATAGTTAAAGGCCTAGTGAAGGTAAGAGAGACGTGGAATGGCCGAAATTCTCCATTGGTGGTTGAGTCTAATTCCTTGGAA
GCCATCAATCTTTTGAATTCTCATAATGAAAGGGGAAATGAAAAACTGGTAAATCTTTTTCATTTCTTCAACCCAACGATTTGTTTTGCACTTGGAATTGACCGGATTCC
GATTGGATTTGGCTTCACGGCAAGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTTCTCAATACTCCAACAGCTTCTAGCTCGAAGGAGTCTGATTCGAGGGGGTTGTGGAGCTCTTTATTCAATAATCCCCCTTCTAATGCCAAATCAATCATGCT
TCAAGTTGAAAAATCTCAGATGGTGTTCAAGCGTGGCAAATCTGATTGGATTATTCCGGATTGGAATGGTCACTTGATTGGTGGTAGCTTTAACTTCTCCACTTCTTGTT
GGCCAGTGAAAGTTTTAGAAGCTAAGGCCATAGTTAAAGGCCTAGTGAAGGTAAGAGAGACGTGGAATGGCCGAAATTCTCCATTGGTGGTTGAGTCTAATTCCTTGGAA
GCCATCAATCTTTTGAATTCTCATAATGAAAGGGGAAATGAAAAACTGGTAAATCTTTTTCATTTCTTCAACCCAACGATTTGTTTTGCACTTGGAATTGACCGGATTCC
GATTGGATTTGGCTTCACGGCAAGAGTTTAA
Protein sequenceShow/hide protein sequence
MTLLNTPTASSSKESDSRGLWSSLFNNPPSNAKSIMLQVEKSQMVFKRGKSDWIIPDWNGHLIGGSFNFSTSCWPVKVLEAKAIVKGLVKVRETWNGRNSPLVVESNSLE
AINLLNSHNERGNEKLVNLFHFFNPTICFALGIDRIPIGFGFTARV