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Clc04G08390 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G08390
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:22104707..22105303
RNA-Seq ExpressionClc04G08390
SyntenyClc04G08390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]1.5e-0532.26Show/hide
Query:  NEVNGGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTLSVSLTFSLPWYPWEMTTLIHEMREAFHNSSQKRVRNS
        N   GG LKGII+PLT++Y+ELK+R++ + +VD   +D+V+RV Y L    P + +TDDD+     +   +   P  ++T+    RE+    S +  ++ 
Subjt:  NEVNGGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTLSVSLTFSLPWYPWEMTTLIHEMREAFHNSSQKRVRNS

Query:  EVDAPTVNDLNFNGG---GEWDGN
        E   P    +   G     EW  N
Subjt:  EVDAPTVNDLNFNGG---GEWDGN

XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]1.2e-0740.45Show/hide
Query:  GGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTL---------SVSLTFSLPWYPWEMTTLIHE
        GG L GI++P+TL Y+E K  +Y +A V+ LEFD+VMRV+YKLD   P + + +DD+            V L  +L  Y  E   +IH+
Subjt:  GGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTL---------SVSLTFSLPWYPWEMTTLIHE

XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]3.7e-0440Show/hide
Query:  GVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDD
        G L GI++P++L Y+E+K  +YG+  V   EFD++++V+YKL+   P   + +DD
Subjt:  GVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDD

XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]3.7e-0440Show/hide
Query:  GVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDD
        G L GI++P++L Y+E+K  +YG+  V   EFD++++V+YKL+   P   + +DD
Subjt:  GVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDD

XP_038902319.1 trichohyalin-like [Benincasa hispida]1.1e-0556.25Show/hide
Query:  GGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRP
        GG L GI++P+TL Y+ELK  +Y I  +  LEFD+VMRV+YKLD   P
Subjt:  GGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRP

TrEMBL top hitse value%identityAlignment
A0A6J1DL08 uncharacterized protein LOC1110220717.2e-0632.26Show/hide
Query:  NEVNGGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTLSVSLTFSLPWYPWEMTTLIHEMREAFHNSSQKRVRNS
        N   GG LKGII+PLT++Y+ELK+R++ + +VD   +D+V+RV Y L    P + +TDDD+     +   +   P  ++T+    RE+    S +  ++ 
Subjt:  NEVNGGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTLSVSLTFSLPWYPWEMTTLIHEMREAFHNSSQKRVRNS

Query:  EVDAPTVNDLNFNGG---GEWDGN
        E   P    +   G     EW  N
Subjt:  EVDAPTVNDLNFNGG---GEWDGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGCAATTGTTCATTCAACACAGTGGGACATGGGATGACAGCAAATGAAGTTAATGGAGGTGTTTTAAAGGGCATCATTATGCCACTAACATTGTCATACCAAGA
ACTGAAGGACCGGGTCTATGGAATAGCAAGGGTCGATTTATTAGAATTTGACATTGTAATGAGGGTTCAGTATAAGTTGGACTTGTACAGACCTGTGGTATGCCTAACCG
ACGATGACAACACACTATCGGTGAGTTTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACGACACTAATCCATGAGATGAGAGAGGCGTTTCACAATTCTAGCCAG
AAGAGGGTTCGTAATTCTGAAGTGGATGCACCCACGGTTAATGATCTGAATTTCAATGGTGGAGGTGAGTGGGATGGGAATTGTCATGAGGACGTTGGGTATGATCCTCC
TGTAAATGAGTTCATGCCTGCTATAGTGTTTGATACGCATTGGACACCAATTGTGCATCCTGTGTTCAATGCGCCATTGGAAACTCCAATTCTTCCCACCACTCTCAACC
CTTCTCCTCTTAGATACCACGGAGGGTCAACAGGGCACTCCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGCAATTGTTCATTCAACACAGTGGGACATGGGATGACAGCAAATGAAGTTAATGGAGGTGTTTTAAAGGGCATCATTATGCCACTAACATTGTCATACCAAGA
ACTGAAGGACCGGGTCTATGGAATAGCAAGGGTCGATTTATTAGAATTTGACATTGTAATGAGGGTTCAGTATAAGTTGGACTTGTACAGACCTGTGGTATGCCTAACCG
ACGATGACAACACACTATCGGTGAGTTTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACGACACTAATCCATGAGATGAGAGAGGCGTTTCACAATTCTAGCCAG
AAGAGGGTTCGTAATTCTGAAGTGGATGCACCCACGGTTAATGATCTGAATTTCAATGGTGGAGGTGAGTGGGATGGGAATTGTCATGAGGACGTTGGGTATGATCCTCC
TGTAAATGAGTTCATGCCTGCTATAGTGTTTGATACGCATTGGACACCAATTGTGCATCCTGTGTTCAATGCGCCATTGGAAACTCCAATTCTTCCCACCACTCTCAACC
CTTCTCCTCTTAGATACCACGGAGGGTCAACAGGGCACTCCTCATGA
Protein sequenceShow/hide protein sequence
MESNCSFNTVGHGMTANEVNGGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTLSVSLTFSLPWYPWEMTTLIHEMREAFHNSSQ
KRVRNSEVDAPTVNDLNFNGGGEWDGNCHEDVGYDPPVNEFMPAIVFDTHWTPIVHPVFNAPLETPILPTTLNPSPLRYHGGSTGHSS