; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G08430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G08430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUPF0161 protein At3g09310
Genome locationClcChr04:22127995..22128821
RNA-Seq ExpressionClc04G08430
SyntenyClc04G08430
Gene Ontology termsNA
InterPro domainsIPR002696 - Putative membrane protein insertion efficiency factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032659.1 UPF0161 protein [Cucumis melo var. makuwa]8.8e-7589.24Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TPQN NPIFF GRCHQRP  AAGFSIRFN RKLR PLILSE RATS SSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPL      GGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESLPEPED

XP_004142065.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus]1.3e-7894.74Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCHT QN NPIFFAGRCHQRPC+AAGFSIRFN RKLR  LILSE RATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

XP_008448003.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo]9.4e-7792.76Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TPQN NPIFF GRCHQRP  AAGFSIRFN RKLR PLILSE RATS SSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

XP_023518310.1 UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo]4.9e-7389.47Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCH  QNQNPIFFAGRCHQ   +AA FSIRFN +KLR PLI+SE RATSNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNP G SGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

XP_038882937.1 UPF0161 protein At3g09310 isoform X3 [Benincasa hispida]5.2e-7590.79Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVL TTNCH  QNQNP FFAGRCHQRP +AA FSI++NRR LR PLILS+ RATSNSS+NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

TrEMBL top hitse value%identityAlignment
A0A0A0KXI4 Uncharacterized protein6.4e-7994.74Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCHT QN NPIFFAGRCHQRPC+AAGFSIRFN RKLR  LILSE RATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

A0A1S3BJN3 UPF0161 protein At3g093104.6e-7792.76Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TPQN NPIFF GRCHQRP  AAGFSIRFN RKLR PLILSE RATS SSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

A0A5A7STY4 UPF0161 protein4.3e-7589.24Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+TPQN NPIFF GRCHQRP  AAGFSIRFN RKLR PLILSE RATS SSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPL      GGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESLPEPED

A0A6J1EUS1 UPF0161 protein At3g093101.2e-7288.82Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCH  QNQNPIFFAG C +   +AA FSIRFN +KLR PLI+SE RATSNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

A0A6J1HNH0 UPF0161 protein At3g093101.6e-6986.84Show/hide
Query:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCH  + Q PIFFAG C Q   +AA FSIRFN +KLR PLI+SE RATSNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PT
Subjt:  MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

SwissProt top hitse value%identityAlignment
B0K8I2 Putative membrane protein insertion efficiency factor9.7e-1653.33Show/hide
Query:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP
        ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Subjt:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP

B0T0Z8 Putative membrane protein insertion efficiency factor1.1e-1661.67Show/hide
Query:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP
        LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Subjt:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP

Q11SD8 Putative membrane protein insertion efficiency factor9.7e-1661.02Show/hide
Query:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP
        +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP GGSG+DP
Subjt:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP

Q2S3T2 Putative membrane protein insertion efficiency factor3.5e-1852.17Show/hide
Query:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE
        + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P GG G+DPPRWFDEE
Subjt:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE

Q9SR32 UPF0161 protein At3g093101.8e-3858.82Show/hide
Query:  QNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKK
        +N+NP+    R     C       R  + +LR    LS K   S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKK
Subjt:  QNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKK

Query:  YGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESL
        YGV KGT+LT WRLCRCNPLGGSGFDPPRWF E  +
Subjt:  YGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESL

Arabidopsis top hitse value%identityAlignment
AT3G09310.1 unknown protein1.3e-3958.82Show/hide
Query:  QNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKK
        +N+NP+    R     C       R  + +LR    LS K   S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKK
Subjt:  QNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKK

Query:  YGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESL
        YGV KGT+LT WRLCRCNPLGGSGFDPPRWF E  +
Subjt:  YGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCCCACCACAAACTGCCATACACCCCAAAACCAGAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCACTGCTGCCGGCTTCAGTATTCG
ATTTAATCGCCGGAAGCTCCGTTGGCCGTTAATCCTAAGCGAAAAGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTA
AAGCTGCATTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGTTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCCATGCAAGCTTACAAG
AAATATGGTGTTGCGAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGCTT
GCCAGAACCAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTCCCACCACAAACTGCCATACACCCCAAAACCAGAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCACTGCTGCCGGCTTCAGTATTCG
ATTTAATCGCCGGAAGCTCCGTTGGCCGTTAATCCTAAGCGAAAAGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTA
AAGCTGCATTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGTTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCCATGCAAGCTTACAAG
AAATATGGTGTTGCGAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGCTT
GCCAGAACCAGAAGATTGA
Protein sequenceShow/hide protein sequence
MAVLPTTNCHTPQNQNPIFFAGRCHQRPCTAAGFSIRFNRRKLRWPLILSEKRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYK
KYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED