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Clc04G08680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G08680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:22398864..22399799
RNA-Seq ExpressionClc04G08680
SyntenyClc04G08680
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032619.1 uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa]5.2e-5194.74Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+RFLY RLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDI GDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADD+
Subjt:  ACFVRALGLWADDD

XP_004142209.1 uncharacterized protein LOC101207834 [Cucumis sativus]1.4e-5195.61Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+RFLY RLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDI GDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADDD
Subjt:  ACFVRALGLWADDD

XP_022963374.1 uncharacterized protein LOC111463600 [Cucurbita moschata]5.4e-4888.79Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+R LY RLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPMD  GDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDAL
        ACFVRALGLWADDD+L
Subjt:  ACFVRALGLWADDDAL

XP_022972738.1 uncharacterized protein LOC111471253 [Cucurbita maxima]2.0e-4787.93Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+R LY RLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPM+  GDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDAL
        ACFVRALGLWADDD+L
Subjt:  ACFVRALGLWADDDAL

XP_038883336.1 uncharacterized protein LOC120074319 [Benincasa hispida]1.0e-5194.83Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+RFLY RL+SRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSF A CKSDGLVRVPMDI GDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDAL
        ACFVRALGLWADDDAL
Subjt:  ACFVRALGLWADDDAL

TrEMBL top hitse value%identityAlignment
A0A0A0L0V5 Uncharacterized protein6.6e-5295.61Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+RFLY RLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDI GDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADDD
Subjt:  ACFVRALGLWADDD

A0A5A7STU5 Uncharacterized protein2.5e-5194.74Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+RFLY RLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDI GDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDD
        ACFVRALGLWADD+
Subjt:  ACFVRALGLWADDD

A0A6J1CRS0 uncharacterized protein LOC1110136704.6e-4582.79Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKS------DGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAA
        M+RFL+ RLRSRWPLLVYSASWTILLTLTVA ASFAPELAFASAISPSSSFAA+CK+       GLVRVPMD+ GDVLCVPD LFRKS IDLIVPPIFAA
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKS------DGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAA

Query:  VVVAGSACFVRALGLWADDDAL
        VVVAGSAC VRA GLWADDD +
Subjt:  VVVAGSACFVRALGLWADDDAL

A0A6J1HJX3 uncharacterized protein LOC1114636002.6e-4888.79Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+R LY RLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPMD  GDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDAL
        ACFVRALGLWADDD+L
Subjt:  ACFVRALGLWADDDAL

A0A6J1IAZ3 uncharacterized protein LOC1114712539.9e-4887.93Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        M+R LY RLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G VRVPM+  GDV+CVPD LFRKSGIDLIVPPIFAAVVVAGS
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRALGLWADDDAL
        ACFVRALGLWADDD+L
Subjt:  ACFVRALGLWADDDAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07795.1 unknown protein3.5e-2146.02Show/hide
Query:  LYHRLRS-----------RWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFA
        +YHRL S           RWP++  +A+WT+LL  TVA ASFAPE+AF S +S S         DG V++PMD +G+ +CVP  + ++S  DL VP IFA
Subjt:  LYHRLRS-----------RWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFA

Query:  AVVVAGSACFVRA
        AV+V  SAC +R+
Subjt:  AVVVAGSACFVRA

AT2G28725.1 unknown protein8.9e-1743.14Show/hide
Query:  LYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFV
        +  +  +RW +LV +A+WTILL +TVA ASFAPE+AF S +  S        SDG VR+PMD+ G++L +P  + + S +D+ +P IFA V+V  S   +
Subjt:  LYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFV

Query:  RA
        R+
Subjt:  RA

AT2G37530.1 unknown protein2.1e-2654.7Show/hide
Query:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSS--FAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVA
        M   L HR   R P  VY A+WT+ LTLTVA  S APE AF SAI PSSS  F+  C S   + VP+D+  +VLC+P  LFR+S +DL+VPP+FAA+VVA
Subjt:  MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSS--FAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVA

Query:  GSACFVRALGLWADDDA
         SA  VR +GLW  D+A
Subjt:  GSACFVRALGLWADDDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCGATTTCTATACCACCGTCTCAGATCGCGGTGGCCACTGCTCGTCTACTCCGCCTCCTGGACCATTCTCCTGACGCTCACCGTCGCCGCCGCCTCCTTCGCGCC
GGAGCTCGCCTTCGCGTCGGCTATTTCGCCGTCCTCGTCTTTTGCGGCCGAGTGTAAGTCCGATGGTTTGGTTAGGGTTCCGATGGATATTTCGGGAGATGTTCTTTGCG
TTCCGGATCGTTTGTTTAGGAAATCCGGAATTGATCTGATTGTTCCTCCTATTTTCGCCGCAGTTGTAGTGGCTGGTTCGGCTTGCTTTGTTAGGGCTTTGGGCCTTTGG
GCCGACGACGATGCCCTCTGA
mRNA sequenceShow/hide mRNA sequence
CTCGACACGGCACCATTTTTGAATTGCACAAACAGCCATGTTTTTGTGTAATGTGCAAAGTCTTACAGAAAAAAAAAGAAAAAAAAAATCAATCGGAAAGAAGATTGAAG
AATGAATCCGAAGCACACAAATGTTCTTGATTTCAACCACCAATGCGTCATCATCAAACTTCAGTCAAAACCTAATCCATCCATCTTCTTCCCTCTAAATAATTAGCTCA
TCCATTAAACCAAACCCTAACTCACTCACCCACTCCGCTTCCTCCTCCTATTTCTTTTTCCTTACCGCACCCTCAAAATCCACTCCGTCCAACAGAAATGATCCGATTTC
TATACCACCGTCTCAGATCGCGGTGGCCACTGCTCGTCTACTCCGCCTCCTGGACCATTCTCCTGACGCTCACCGTCGCCGCCGCCTCCTTCGCGCCGGAGCTCGCCTTC
GCGTCGGCTATTTCGCCGTCCTCGTCTTTTGCGGCCGAGTGTAAGTCCGATGGTTTGGTTAGGGTTCCGATGGATATTTCGGGAGATGTTCTTTGCGTTCCGGATCGTTT
GTTTAGGAAATCCGGAATTGATCTGATTGTTCCTCCTATTTTCGCCGCAGTTGTAGTGGCTGGTTCGGCTTGCTTTGTTAGGGCTTTGGGCCTTTGGGCCGACGACGATG
CCCTCTGATGGCCCGAATTTGTTCAAGGGCCTTTGGGTATGAAAGCCCAATTCAATGTATACATTTTTGTTTTCTTCTCCTCTTCATATTTAGGCGTAGTTTAATTTCTA
TGATATGTTTGTGAACAAATACAACAATTCTAAAAAATTTGCTTTTATGGTTTATGGTTATCTCAAAATTGGTTTTTAAAAAATGCACCACAATTACCTAAGAAAGACAT
CGAATGAAAAAGGTGTGGATGGAGTGAGCCTAGGTTCGCTCGAGCTCAAAACCAAC
Protein sequenceShow/hide protein sequence
MIRFLYHRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDISGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLW
ADDDAL