; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G08910 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G08910
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:22620767..22621237
RNA-Seq ExpressionClc04G08910
SyntenyClc04G08910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047323.1 hypothetical protein E6C27_scaffold908G001440 [Cucumis melo var. makuwa]4.2e-6477.22Show/hide
Query:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE
        MS M YNGS+ IGLLMLNAN YNY  AEFGFMSQHQSDGDPIGDNPE EQTYHS YGW  +E++ TDL F+C+ PYGNQNGC  E+ TELIL QNE+Q+E
Subjt:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE

Query:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY
        DYNGDSRNLYYEF+WDC + WFGLGE+EQGQ  NGQEL PENDC SDALALLEA+LGY
Subjt:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY

KAG6595286.1 hypothetical protein SDJN03_11839, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4663.12Show/hide
Query:  MSYNGSNCIGLLMLNANSYNYPTAE-----FGFMSQHQ-SDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMENTELILLQNEDQ
        M+ +GSN IGLLM NANSY+YP         GF  QHQ SDGDPI D+PEG++T  S +    +ELDS+DL F+ QDPY NQ+GC MEN ELIL  NEDQ
Subjt:  MSYNGSNCIGLLMLNANSYNYPTAE-----FGFMSQHQ-SDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMENTELILLQNEDQ

Query:  VEDYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY
         EDY GD RNLYYEF W CF+ WFGLGEDE  Q WNGQEL+ E DC+S+A+ALLE++LGY
Subjt:  VEDYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY

KGN54204.1 hypothetical protein Csa_017990 [Cucumis sativus]4.8e-6074.68Show/hide
Query:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE
        MS M YNGS+ IGLLMLNAN Y+ P  EFGFMSQHQSDGDPIGDNPE EQ YHS YGW  +E++ TDL F+C+  YGNQNGC  E+ TELIL QNE+Q+E
Subjt:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE

Query:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY
        DYNGDSRNLYYEF+WDC + WFG+GEDEQGQ  NGQEL PENDC SDALALLEA+LGY
Subjt:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY

TrEMBL top hitse value%identityAlignment
A0A0A0KZF2 Uncharacterized protein2.3e-6074.68Show/hide
Query:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE
        MS M YNGS+ IGLLMLNAN Y+ P  EFGFMSQHQSDGDPIGDNPE EQ YHS YGW  +E++ TDL F+C+  YGNQNGC  E+ TELIL QNE+Q+E
Subjt:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE

Query:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY
        DYNGDSRNLYYEF+WDC + WFG+GEDEQGQ  NGQEL PENDC SDALALLEA+LGY
Subjt:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY

A0A5A7TUT5 Uncharacterized protein2.0e-6477.22Show/hide
Query:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE
        MS M YNGS+ IGLLMLNAN YNY  AEFGFMSQHQSDGDPIGDNPE EQTYHS YGW  +E++ TDL F+C+ PYGNQNGC  E+ TELIL QNE+Q+E
Subjt:  MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDL-FDCQDPYGNQNGCRMEN-TELILLQNEDQVE

Query:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY
        DYNGDSRNLYYEF+WDC + WFGLGE+EQGQ  NGQEL PENDC SDALALLEA+LGY
Subjt:  DYNGDSRNLYYEFTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCCATGAGTTACAATGGCTCTAACTGCATTGGCCTGCTCATGCTAAATGCCAACAGCTACAACTATCCTACAGCGGAGTTCGGTTTCATGAGCCAACACCAGTC
TGATGGAGATCCAATTGGAGACAATCCTGAGGGTGAACAGACTTACCACAGTTATTATGGATGGTTGTTGAGTGAACTCGACTCCACTGATCTCTTCGATTGCCAAGACC
CTTATGGCAATCAAAATGGCTGCAGAATGGAGAATACAGAACTCATTCTACTCCAGAATGAGGATCAAGTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAA
TTTACTTGGGATTGCTTTCAGTTATGGTTTGGACTTGGGGAAGATGAGCAAGGTCAAGGCTGGAATGGGCAAGAATTGAAACCTGAAAACGACTGCAATTCTGATGCTTT
GGCACTCCTAGAAGCCGTCCTGGGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCCATGAGTTACAATGGCTCTAACTGCATTGGCCTGCTCATGCTAAATGCCAACAGCTACAACTATCCTACAGCGGAGTTCGGTTTCATGAGCCAACACCAGTC
TGATGGAGATCCAATTGGAGACAATCCTGAGGGTGAACAGACTTACCACAGTTATTATGGATGGTTGTTGAGTGAACTCGACTCCACTGATCTCTTCGATTGCCAAGACC
CTTATGGCAATCAAAATGGCTGCAGAATGGAGAATACAGAACTCATTCTACTCCAGAATGAGGATCAAGTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAA
TTTACTTGGGATTGCTTTCAGTTATGGTTTGGACTTGGGGAAGATGAGCAAGGTCAAGGCTGGAATGGGCAAGAATTGAAACCTGAAAACGACTGCAATTCTGATGCTTT
GGCACTCCTAGAAGCCGTCCTGGGCTATTGA
Protein sequenceShow/hide protein sequence
MSAMSYNGSNCIGLLMLNANSYNYPTAEFGFMSQHQSDGDPIGDNPEGEQTYHSYYGWLLSELDSTDLFDCQDPYGNQNGCRMENTELILLQNEDQVEDYNGDSRNLYYE
FTWDCFQLWFGLGEDEQGQGWNGQELKPENDCNSDALALLEAVLGY