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Clc04G09160 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G09160
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:22798415..22800604
RNA-Seq ExpressionClc04G09160
SyntenyClc04G09160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047279.1 putative transmembrane protein [Cucumis melo var. makuwa]9.3e-2068.04Show/hide
Query:  INFITIIFFLFLLATPSFSSSKGGS---ENGGMESSSSSSSSSSSSEVYEIDYRGPETHPS-HISPPDHSHG-RPWIIHHHQHQ-FQPKQ--SSLKP
        +NF+T +FFLFLLATPS +SS+GGS    NGG++   SSSSS     VYEIDYRGPETH S HISPPDHSHG RPWIIHHH HQ  QPKQ  +SL P
Subjt:  INFITIIFFLFLLATPSFSSSKGGS---ENGGMESSSSSSSSSSSSEVYEIDYRGPETHPS-HISPPDHSHG-RPWIIHHHQHQ-FQPKQ--SSLKP
KAG6604438.1 hypothetical protein SDJN03_05047, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2061.9Show/hide
Query:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG
        ME+ F T +FF+FLL TPSF   SS +GGSENGGM          SSSEVYEIDYRGPETH SHISPP HSHGRPWI+ HH+H   P      P   +KG
Subjt:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG

Query:  SKVGA
        SKVGA
Subjt:  SKVGA
XP_022925989.1 uncharacterized protein LOC111433241 [Cucurbita moschata]1.4e-2061.9Show/hide
Query:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG
        ME++F T +FF+FLL TPSF   SS +GGSENGGM          SSSEVYEIDYRGPETH SHISPP HSHGRPWI+ HH+H   P      P   +KG
Subjt:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG

Query:  SKVGA
        SKVGA
Subjt:  SKVGA
XP_022979166.1 uncharacterized protein LOC111478885 [Cucurbita maxima]5.5e-2060.95Show/hide
Query:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG
        ME++F T +FFLFLL TPSF   SSS+GGSENGG+           SS+VYEIDYRGPETH SHISPP  SHGRPWI+HHH H   P      P   +KG
Subjt:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG

Query:  SKVGA
        SKVGA
Subjt:  SKVGA
XP_038881428.1 uncharacterized protein LOC120072958 [Benincasa hispida]9.3e-2876Show/hide
Query:  INFITIIFFLFLLATPSFSSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSY-MKGSKVG
        I+F+T +FFLFLLATPS SS KGGSENG M+     SSSSSSSEVYEIDYRGPETH SHISPPDHSHGRPWI HH QHQ QPKQ   KPD Y +KGSK G
Subjt:  INFITIIFFLFLLATPSFSSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSY-MKGSKVG
TrEMBL top hitse value%identityAlignment
A0A0A0KIB6 Uncharacterized protein1.3e-1463.83Show/hide
Query:  INFITIIFFLFLL-ATPSFSSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPS-HISPPDHSHG-RPWIIHHHQHQ-FQPKQ-SSLKP
        +NF+T +FFLFLL ATPS SSSKG         +S +S+      VYEIDYRGPETH S HISPPDHSHG RPWIIHHH+HQ  QPKQ +SL P
Subjt:  INFITIIFFLFLL-ATPSFSSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPS-HISPPDHSHG-RPWIIHHHQHQ-FQPKQ-SSLKP
A0A5A7U1B9 Putative transmembrane protein4.5e-2068.04Show/hide
Query:  INFITIIFFLFLLATPSFSSSKGGS---ENGGMESSSSSSSSSSSSEVYEIDYRGPETHPS-HISPPDHSHG-RPWIIHHHQHQ-FQPKQ--SSLKP
        +NF+T +FFLFLLATPS +SS+GGS    NGG++   SSSSS     VYEIDYRGPETH S HISPPDHSHG RPWIIHHH HQ  QPKQ  +SL P
Subjt:  INFITIIFFLFLLATPSFSSSKGGS---ENGGMESSSSSSSSSSSSEVYEIDYRGPETHPS-HISPPDHSHG-RPWIIHHHQHQ-FQPKQ--SSLKP
A0A6J1CPX6 uncharacterized protein LOC1110136521.2e-1761.39Show/hide
Query:  ITIIFFLFLLATPSFSSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPD-HSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG---SKVG
        IT  F   +LATPS SSSKGGSENG ME          SSEVYEIDYRGPETH SH SPPD HSHGRPWIIHH     QPK  SL P    +     KVG
Subjt:  ITIIFFLFLLATPSFSSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPD-HSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG---SKVG

Query:  A
        A
Subjt:  A
A0A6J1EDR4 uncharacterized protein LOC1114332416.9e-2161.9Show/hide
Query:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG
        ME++F T +FF+FLL TPSF   SS +GGSENGGM          SSSEVYEIDYRGPETH SHISPP HSHGRPWI+ HH+H   P      P   +KG
Subjt:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG

Query:  SKVGA
        SKVGA
Subjt:  SKVGA
A0A6J1IQ06 uncharacterized protein LOC1114788852.6e-2060.95Show/hide
Query:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG
        ME++F T +FFLFLL TPSF   SSS+GGSENGG+           SS+VYEIDYRGPETH SHISPP  SHGRPWI+HHH H   P      P   +KG
Subjt:  MEINFITIIFFLFLLATPSF---SSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKG

Query:  SKVGA
        SKVGA
Subjt:  SKVGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G03120.1 unknown protein1.2e-0457.14Show/hide
Query:  SSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHH
        +  S  + SEVYEIDYRGPETH S   PP+  HG+P  IHH+
Subjt:  SSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCAACTTTATCACCATTATCTTCTTCCTCTTTCTCCTTGCTACCCCTTCATTTTCTTCTTCTAAAGGTGGATCTGAAAATGGTGGAATGGAGTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCATCATCAGAGGTTTATGAAATAGATTATAGAGGACCAGAAACTCACCCATCTCATATTTCTCCACCTGATCACTCCCATGGAAGACCTTGGA
TTATTCATCATCATCAACATCAATTTCAACCCAAACAGTCTTCTCTGAAGCCTGATTCATACATGAAGGGAAGTAAAGTGGGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCAACTTTATCACCATTATCTTCTTCCTCTTTCTCCTTGCTACCCCTTCATTTTCTTCTTCTAAAGGTGGATCTGAAAATGGTGGAATGGAGTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCATCATCAGAGGTTTATGAAATAGATTATAGAGGACCAGAAACTCACCCATCTCATATTTCTCCACCTGATCACTCCCATGGAAGACCTTGGA
TTATTCATCATCATCAACATCAATTTCAACCCAAACAGTCTTCTCTGAAGCCTGATTCATACATGAAGGGAAGTAAAGTGGGTGCATGA
Protein sequenceShow/hide protein sequence
MEINFITIIFFLFLLATPSFSSSKGGSENGGMESSSSSSSSSSSSEVYEIDYRGPETHPSHISPPDHSHGRPWIIHHHQHQFQPKQSSLKPDSYMKGSKVGA