; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G09500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G09500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin responsive SAUR protein
Genome locationClcChr04:23070605..23071888
RNA-Seq ExpressionClc04G09500
SyntenyClc04G09500
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595237.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5793.81Show/hide
Query:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KG+FIRACANKWRK+GSKVVPCT C  CCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
Subjt:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  NLFLSVVRCASSP
        NLFLSVVR ASSP
Subjt:  NLFLSVVRCASSP

KAG6604414.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]3.9e-6091.8Show/hide
Query:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KG FIRACANKWRKIGSKVVPC AC QCCQWVLWS LHEDCFIPRDVPKGHLVVYVGENNRR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDE
Subjt:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  NLFLSVVRCASSPDNRQIPLHL
        NLFLSVVR A+SPDNRQ PL L
Subjt:  NLFLSVVRCASSPDNRQIPLHL

XP_016900724.1 PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo]1.0e-6394.35Show/hide
Query:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        MKKGRFIRACANKWRKIGSKVVPCTAC  CCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
Subjt:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRCASSPDNRQIPLHL
        DENLFLSVV  AS+PDNRQIPL L
Subjt:  DENLFLSVVRCASSPDNRQIPLHL

XP_022143895.1 uncharacterized protein LOC111013697 [Momordica charantia]2.8e-5892.44Show/hide
Query:  KLHIENMKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANS
        KLH ENM KGRFIRAC NKWRKIGSKVVPCTAC  CCQWVLWSPLHEDCFIP DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANS
Subjt:  KLHIENMKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANS

Query:  KLCIPCDENLFLSVVRCAS
        KLCIPCDE+LFLSVV  AS
Subjt:  KLCIPCDENLFLSVVRCAS

XP_038883934.1 auxin-responsive protein SAUR50 [Benincasa hispida]1.7e-6697.58Show/hide
Query:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        MKKGRFIRACANKWRKIGSKVVPCTAC  CCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
Subjt:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRCASSPDNRQIPLHL
        DENLFLSVVR ASSPDNRQIPLHL
Subjt:  DENLFLSVVRCASSPDNRQIPLHL

TrEMBL top hitse value%identityAlignment
A0A1S4DXL1 indole-3-acetic acid-induced protein ARG74.8e-6494.35Show/hide
Query:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        MKKGRFIRACANKWRKIGSKVVPCTAC  CCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
Subjt:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRCASSPDNRQIPLHL
        DENLFLSVV  AS+PDNRQIPL L
Subjt:  DENLFLSVVRCASSPDNRQIPLHL

A0A2N9EJG5 Uncharacterized protein5.2e-5074.59Show/hide
Query:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KG+ +R C NKWRK+GS+V PC AC  CCQW  W   HE+  IP+DVPKGHLVVYVGEN +RFVIKI+LLNHPLFKALLDQA+DE+DFT +SKLCIPCDE
Subjt:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  NLFLSVVRCASSPDNRQIPLHL
        NLFLSVVRCASSP++R+IPL L
Subjt:  NLFLSVVRCASSPDNRQIPLHL

A0A6J1CQ37 uncharacterized protein LOC1110136971.4e-5892.44Show/hide
Query:  KLHIENMKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANS
        KLH ENM KGRFIRAC NKWRKIGSKVVPCTAC  CCQWVLWSPLHEDCFIP DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANS
Subjt:  KLHIENMKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANS

Query:  KLCIPCDENLFLSVVRCAS
        KLCIPCDE+LFLSVV  AS
Subjt:  KLCIPCDENLFLSVVRCAS

A0A6J1HEL5 auxin-induced protein 15A3.4e-5792.92Show/hide
Query:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KG+FIRACANKWRK+GSKVVPCT C  CCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
Subjt:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  NLFLSVVRCASSP
        NLFLSVV  ASSP
Subjt:  NLFLSVVRCASSP

A0A6J1I941 auxin-induced protein 15A-like4.9e-5691.96Show/hide
Query:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KG+FIRACANKWRK+GSKVVPCT C  CCQWVLWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFT+NSKLCIPCDE
Subjt:  KGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  NLFLSVVRCASS
        NLFLSVV  ASS
Subjt:  NLFLSVVRCASS

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.2e-1455.38Show/hide
Query:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLF
        EDC +P DVPKGH  VYVGEN  R+++ IS L HP F++LL +A++EF F  +  L IPCDE +F
Subjt:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLF

P0DKL1 Auxin-responsive protein SAUR509.9e-1448.53Show/hide
Query:  HEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLS
        ++D  +P DVPKGH VVYVGE   R+++ IS L+HP F+ LL ++++EF F  +  + IPC E  FLS
Subjt:  HEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLS

P32295 Indole-3-acetic acid-induced protein ARG76.4e-1352.94Show/hide
Query:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSVVRCASS
        D PKG+L VYVGEN +RFVI +S LN PLF+ LL QA++EF +      L IPC E+LF  +  C S+
Subjt:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSVVRCASS

P33081 Auxin-induced protein 15A1.0e-1049.23Show/hide
Query:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSVVRC
        D PKG+L VYVGE  +RFVI +S LN P F+ LL QA++EF +      L IPC E++F  +  C
Subjt:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSVVRC

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 103.2e-1249.23Show/hide
Query:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVV
        +P+DVPKGH  VYVG N  R+++ IS L+H  F+ LL  A++EF F  +  L IPCDE  F S++
Subjt:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVV

Arabidopsis top hitse value%identityAlignment
AT1G75590.1 SAUR-like auxin-responsive protein family1.4e-1546.58Show/hide
Query:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRCASSPDN
        +P DVP GH+ VYVG + RRFV++ + LNHP+ + LL QA++EF F     L IPC+E++F   +R  S  D+
Subjt:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRCASSPDN

AT2G37030.1 SAUR-like auxin-responsive protein family1.4e-3456.41Show/hide
Query:  KGRFIRACANKWRKIGSKV-VPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        K +FI++C  K +K+ SKV +PC +C  C + + W+   E   IPRDVPKGHLVVYVGE  +RFVI I+LL HPLF+ALLDQAQD + F+A+S+L IPC+
Subjt:  KGRFIRACANKWRKIGSKV-VPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ENLFLSVVRCASSPDNR
        E+ FL VVRCA +P ++
Subjt:  ENLFLSVVRCASSPDNR

AT3G53250.1 SAUR-like auxin-responsive protein family1.1e-2855.66Show/hide
Query:  KIGSKVVPC--TACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRCAS
        K  S V+PC  ++C  CC  V W    E+  IP+DVP+GHLVVYVG++ +RFVIK+SLL HP+FKALLDQAQD ++   +S+L IPCDEN FL VVRC+ 
Subjt:  KIGSKVVPC--TACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRCAS

Query:  SPDNRQ
        +P +++
Subjt:  SPDNRQ

AT4G34760.1 SAUR-like auxin-responsive protein family8.3e-1655.38Show/hide
Query:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLF
        EDC +P DVPKGH  VYVGEN  R+++ IS L HP F++LL +A++EF F  +  L IPCDE +F
Subjt:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLF

AT5G03310.1 SAUR-like auxin-responsive protein family5.9e-2250.42Show/hide
Query:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVG---ENNRRFVIKISLLNHPLFKALLDQAQDEF--DFTA-NS
        MKK + I   A  W+++ S+V            V      +   IP DVPKGHLVVYVG   E  +RFVIKI+LL+ P+F+ALLDQ++DE   DFT+ +S
Subjt:  MKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVG---ENNRRFVIKISLLNHPLFKALLDQAQDEF--DFTA-NS

Query:  KLCIPCDENLFLSVVRCAS
        KLCI CDE LFL V+RCAS
Subjt:  KLCIPCDENLFLSVVRCAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTCTCTTAAAAGATGAAAAATCTAGATGTCTTTTGAAGCAGTTAATTTTGAGGTGGAGCCTCAATGACGGCAGTAACTTAAAAGAAAAGAAAGGAAAACTAAA
GCTACATATTGAAAATATGAAGAAGGGGAGGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGATAGGAAGCAAAGTTGTACCTTGTACAGCCTGCGGGCAGTGCTGCC
AATGGGTTTTGTGGTCACCCTTGCATGAGGATTGCTTCATTCCGCGAGATGTCCCAAAGGGTCACTTGGTTGTCTATGTGGGTGAGAATAACAGAAGGTTTGTAATCAAA
ATTAGCCTTCTCAATCACCCTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTT
CCTTAGTGTTGTCCGCTGCGCTAGCTCACCTGATAACCGACAAATCCCTCTGCATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTCTCTTAAAAGATGAAAAATCTAGATGTCTTTTGAAGCAGTTAATTTTGAGGTGGAGCCTCAATGACGGCAGTAACTTAAAAGAAAAGAAAGGAAAACTAAA
GCTACATATTGAAAATATGAAGAAGGGGAGGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGATAGGAAGCAAAGTTGTACCTTGTACAGCCTGCGGGCAGTGCTGCC
AATGGGTTTTGTGGTCACCCTTGCATGAGGATTGCTTCATTCCGCGAGATGTCCCAAAGGGTCACTTGGTTGTCTATGTGGGTGAGAATAACAGAAGGTTTGTAATCAAA
ATTAGCCTTCTCAATCACCCTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTT
CCTTAGTGTTGTCCGCTGCGCTAGCTCACCTGATAACCGACAAATCCCTCTGCATCTTTGA
Protein sequenceShow/hide protein sequence
MSVLLKDEKSRCLLKQLILRWSLNDGSNLKEKKGKLKLHIENMKKGRFIRACANKWRKIGSKVVPCTACGQCCQWVLWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIK
ISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRCASSPDNRQIPLHL