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Clc04G09615 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G09615
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSAUR-like auxin-responsive protein family
Genome locationClcChr04:23166365..23168493
RNA-Seq ExpressionClc04G09615
SyntenyClc04G09615
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063814.1 auxin-responsive protein SAUR40-like [Cucumis melo var. makuwa]9.2e-4892.59Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKEPKPES  EEFEAA TVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQK+
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

KAG6604402.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4386.11Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKEPK +S +EEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK 
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

XP_023543955.1 uncharacterized protein LOC111803675 [Cucurbita pepo subsp. pepo]1.8e-4386.11Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKEPK +S +EEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK 
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

XP_031742896.1 auxin-induced protein 10A5-like [Cucumis sativus]5.0e-4690.74Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKE + ES  EEFEAA TVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

XP_038881209.1 auxin-responsive protein SAUR71-like [Benincasa hispida]1.7e-4690.74Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKE KPES +EEFEAA+TVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK+
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

TrEMBL top hitse value%identityAlignment
A0A0A0KEQ9 Uncharacterized protein2.4e-4690.74Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKE + ES  EEFEAA TVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

A0A498ICP9 Uncharacterized protein1.2e-2460Show/hide
Query:  PKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASIIWA
        P+    +E+ E A  VPKDV+EGHF VFAV G+E +RFV+ LE LSNPEFLRLLE AKEEYGF+QKGAL +PCRP+ELQKI++  R++K+     +I +A
Subjt:  PKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASIIWA

A0A5A7V9B1 Auxin-responsive protein SAUR40-like4.4e-4892.59Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKEPKPES  EEFEAA TVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQK+
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

A0A6J1EC89 uncharacterized protein LOC1114330029.6e-4385.19Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKEPK +S +EEF AAV VPKDVEEGHFVVFA DGDERKRFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK 
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        G WIAS +
Subjt:  GEWIASII

A0A6J1IPG4 uncharacterized protein LOC1114776318.7e-4486.11Show/hide
Query:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN
        KS SPL+SKEPK +S +EEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK 
Subjt:  KSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKN

Query:  GEWIASII
        GEWIAS +
Subjt:  GEWIASII

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR405.7e-0836.67Show/hide
Query:  TVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRK---QKNGEWIASIIWAD
        TV   V  GH  V    G++++RFV++ E L++P F+ LL  + +EYG+ QKG L +PC     +++VE  R        E IAS+   D
Subjt:  TVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRK---QKNGEWIASIIWAD

O65695 Auxin-responsive protein SAUR502.5e-0844.83Show/hide
Query:  VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC
        +P DV +GHF V+   G+ R R+++ + FL++PEF  LL+ A+EE+GF     LT+PC
Subjt:  VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC

Q9LTV3 Auxin-responsive protein SAUR721.8e-0936.45Show/hide
Query:  RPDDAKSFSPLISKEPKPESSNEEF-EAAVT-----VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        R  D+  +S L S   +P   +E F  ++VT         V EGH  V+   GDE +RFV++ E L++P F+ LL  + +EYG++QKG L +PC     +
Subjt:  RPDDAKSFSPLISKEPKPESSNEEF-EAAVT-----VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERR
        +I+E  R
Subjt:  KIVEERR

Q9SGU2 Auxin-responsive protein SAUR715.7e-0833.66Show/hide
Query:  RPDDAKSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEER
        R  D+  +S L S+  +  +  E+ ++       V EGH  V+   G E +RFV+N E L++P F+ LL+ + +EYG++Q+G L +PC     ++I+E  
Subjt:  RPDDAKSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEER

Query:  R
        R
Subjt:  R

Q9ZUZ3 Auxin-responsive protein SAUR321.1e-0837.18Show/hide
Query:  KDVEEGHFVV-FAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEE---LQKIVEERRKQKNG
        KDV +G   +     G+E++RF++ + + ++P F++LL+ A++EYGF QKG +T+PC  EE   +Q +++  R   NG
Subjt:  KDVEEGHFVV-FAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEE---LQKIVEERRKQKNG

Arabidopsis top hitse value%identityAlignment
AT2G28085.1 SAUR-like auxin-responsive protein family6.8e-1745.38Show/hide
Query:  SSGNKRGILIRVSGV--RPDDAKSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDG--DERKRFVINLEFLSNPEFLRLLELAKEEYGFQQK
        S   K G ++++  V  R    K FS   +K+P PE    +      VPKDV+EGHF V AVDG  +  +RFV+ L FL +P F +LLE A+EEYGF   
Subjt:  SSGNKRGILIRVSGV--RPDDAKSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDG--DERKRFVINLEFLSNPEFLRLLELAKEEYGFQQK

Query:  GALTVPCRPEELQKIVEER
        GAL VPCRP  L+ I+ E+
Subjt:  GALTVPCRPEELQKIVEER

AT2G46690.1 SAUR-like auxin-responsive protein family8.1e-1037.18Show/hide
Query:  KDVEEGHFVV-FAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEE---LQKIVEERRKQKNG
        KDV +G   +     G+E++RF++ + + ++P F++LL+ A++EYGF QKG +T+PC  EE   +Q +++  R   NG
Subjt:  KDVEEGHFVV-FAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEE---LQKIVEERRKQKNG

AT3G09870.1 SAUR-like auxin-responsive protein family4.6e-2158.75Show/hide
Query:  EEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRK
        EE  AA  +P DV+EGH  V AV G+  KRFV+ LE L+ PEFLRLLE A+EE+GFQ +G LT+PC+PEE+QKI++  R+
Subjt:  EEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRK

AT3G12830.1 SAUR-like auxin-responsive protein family1.3e-1036.45Show/hide
Query:  RPDDAKSFSPLISKEPKPESSNEEF-EAAVT-----VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        R  D+  +S L S   +P   +E F  ++VT         V EGH  V+   GDE +RFV++ E L++P F+ LL  + +EYG++QKG L +PC     +
Subjt:  RPDDAKSFSPLISKEPKPESSNEEF-EAAVT-----VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERR
        +I+E  R
Subjt:  KIVEERR

AT4G38860.1 SAUR-like auxin-responsive protein family1.1e-0947.46Show/hide
Query:  VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQ-QKGALTVPC
        +P DV +GHF V+   G++R R+++ + FL++PEFL LL+ A+EE+GF+   G LT+PC
Subjt:  VPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQ-QKGALTVPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTAAAATTGATACAGACACTTTATCAAGTTCAAGTGGGAACAAAAGGGGAATATTGATACGGGTTTCGGGAGTTCGTCCTGATGATGCTAAGAGCTTCTCTCC
ACTGATATCTAAAGAACCTAAACCCGAAAGTTCCAACGAAGAATTTGAAGCAGCAGTTACAGTACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGTGGACG
GTGATGAGAGAAAGAGGTTTGTCATTAATTTGGAGTTCCTGTCTAACCCTGAATTCTTAAGGCTATTGGAGCTGGCAAAGGAAGAATATGGATTCCAACAAAAGGGAGCT
CTAACAGTCCCTTGTCGTCCAGAGGAACTACAAAAGATTGTAGAAGAAAGAAGAAAACAGAAAAATGGGGAGTGGATTGCCTCTATTATTTGGGCCGACGGGTTCTCTCA
AGCAATTAGATATTGCCATGACAGCTGCTTCAATAGATGCATCTTCACCCTGTTTAAGTCACCAGATTGGTCATATGAGATGATGACCATGACCATAATTTACCGACCAG
TGACCATAGCAAAAGCTCACAACAGTAACTGTTGTACAGAAGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTAAAATTGATACAGACACTTTATCAAGTTCAAGTGGGAACAAAAGGGGAATATTGATACGGGTTTCGGGAGTTCGTCCTGATGATGCTAAGAGCTTCTCTCC
ACTGATATCTAAAGAACCTAAACCCGAAAGTTCCAACGAAGAATTTGAAGCAGCAGTTACAGTACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGTGGACG
GTGATGAGAGAAAGAGGTTTGTCATTAATTTGGAGTTCCTGTCTAACCCTGAATTCTTAAGGCTATTGGAGCTGGCAAAGGAAGAATATGGATTCCAACAAAAGGGAGCT
CTAACAGTCCCTTGTCGTCCAGAGGAACTACAAAAGATTGTAGAAGAAAGAAGAAAACAGAAAAATGGGGAGTGGATTGCCTCTATTATTTGGGCCGACGGGTTCTCTCA
AGCAATTAGATATTGCCATGACAGCTGCTTCAATAGATGCATCTTCACCCTGTTTAAGTCACCAGATTGGTCATATGAGATGATGACCATGACCATAATTTACCGACCAG
TGACCATAGCAAAAGCTCACAACAGTAACTGTTGTACAGAAGTATAG
Protein sequenceShow/hide protein sequence
MGFKIDTDTLSSSSGNKRGILIRVSGVRPDDAKSFSPLISKEPKPESSNEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLEFLSNPEFLRLLELAKEEYGFQQKGA
LTVPCRPEELQKIVEERRKQKNGEWIASIIWADGFSQAIRYCHDSCFNRCIFTLFKSPDWSYEMMTMTIIYRPVTIAKAHNSNCCTEV