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Clc04G09710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G09710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiontranscription factor RAX2-like
Genome locationClcChr04:23253437..23254420
RNA-Seq ExpressionClc04G09710
SyntenyClc04G09710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143880.1 transcription factor RAX2-like [Momordica charantia]2.8e-1754.73Show/hide
Query:  ANPSPSCN-----NSNMQLVQPNYYYYYDHKQENILSFGGDHQAASCSSSDGSSGGNHLGYGRGEMEYDQNGKFY------------GVMKKENGCSDKQ
        ANPSP CN     N+NMQ      YYY +  QEN LSFGGD   ASCSSSDG  GG    YG+ EM + QNG FY            GVM  E G S+K+
Subjt:  ANPSPSCN-----NSNMQLVQPNYYYYYDHKQENILSFGGDHQAASCSSSDGSSGGNHLGYGRGEMEYDQNGKFY------------GVMKKENGCSDKQ

Query:  SGVRKEETPLEYSLEEINRLI-----NNNNNNNNN--FSLNENYKSGE
         GV KEETPLE S EEI RLI     NNN NNNNN   S +ENYKSGE
Subjt:  SGVRKEETPLEYSLEEINRLI-----NNNNNNNNN--FSLNENYKSGE
XP_038882300.1 transcription factor RAX2-like [Benincasa hispida]4.0e-4877.7Show/hide
Query:  LISSNFSQASRPLHTAANPSPSCNNSNMQLVQPNYY-YYYDHKQENILSFGGDHQAASCSSSDGSSGGNHLGYGRGEMEYDQNGKFYGVMKKENGCSDKQ
        L SSNF+Q S P HTAANPSPSCNN NMQLVQPNYY YYYDH QENILSFGGD QAASCSSSDGSSGGNHLGYG GEME+DQNGKFYG MKKE G     
Subjt:  LISSNFSQASRPLHTAANPSPSCNNSNMQLVQPNYY-YYYDHKQENILSFGGDHQAASCSSSDGSSGGNHLGYGRGEMEYDQNGKFYGVMKKENGCSDKQ

Query:  SGVRKEETP-LEYSLEEINRLINNNNNNNNNFSLNENYKSGETFMYSC
            KEE P LEY+LEEINRLI    +NNN FS NENYKSGETFMY C
Subjt:  SGVRKEETP-LEYSLEEINRLINNNNNNNNNFSLNENYKSGETFMYSC
TrEMBL top hitse value%identityAlignment
A0A6J1CQ16 transcription factor RAX2-like1.4e-1754.73Show/hide
Query:  ANPSPSCN-----NSNMQLVQPNYYYYYDHKQENILSFGGDHQAASCSSSDGSSGGNHLGYGRGEMEYDQNGKFY------------GVMKKENGCSDKQ
        ANPSP CN     N+NMQ      YYY +  QEN LSFGGD   ASCSSSDG  GG    YG+ EM + QNG FY            GVM  E G S+K+
Subjt:  ANPSPSCN-----NSNMQLVQPNYYYYYDHKQENILSFGGDHQAASCSSSDGSSGGNHLGYGRGEMEYDQNGKFY------------GVMKKENGCSDKQ

Query:  SGVRKEETPLEYSLEEINRLI-----NNNNNNNNN--FSLNENYKSGE
         GV KEETPLE S EEI RLI     NNN NNNNN   S +ENYKSGE
Subjt:  SGVRKEETPLEYSLEEINRLI-----NNNNNNNNN--FSLNENYKSGE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTAATTTCATCTAATTTCTCTCAAGCTTCTCGGCCGTTGCATACGGCGGCGAACCCATCTCCGAGCTGCAACAATAGCAATATGCAATTGGTGCAGCCAAATTA
TTATTATTATTATGATCACAAACAAGAAAATATCCTTTCCTTTGGAGGGGATCATCAGGCAGCCAGTTGTAGCTCTTCCGACGGCAGCTCCGGCGGCAACCACCTCGGCT
ACGGCCGAGGAGAAATGGAATATGACCAAAATGGGAAATTCTATGGTGTAATGAAAAAGGAGAATGGGTGTAGTGACAAACAAAGTGGGGTGCGGAAAGAAGAAACTCCA
TTAGAGTACAGTTTAGAAGAAATCAATAGGCTGATTAATAATAATAATAATAATAATAATAATTTTTCACTCAATGAAAATTACAAGAGTGGAGAGACATTCATGTATTC
TTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTAATTTCATCTAATTTCTCTCAAGCTTCTCGGCCGTTGCATACGGCGGCGAACCCATCTCCGAGCTGCAACAATAGCAATATGCAATTGGTGCAGCCAAATTA
TTATTATTATTATGATCACAAACAAGAAAATATCCTTTCCTTTGGAGGGGATCATCAGGCAGCCAGTTGTAGCTCTTCCGACGGCAGCTCCGGCGGCAACCACCTCGGCT
ACGGCCGAGGAGAAATGGAATATGACCAAAATGGGAAATTCTATGGTGTAATGAAAAAGGAGAATGGGTGTAGTGACAAACAAAGTGGGGTGCGGAAAGAAGAAACTCCA
TTAGAGTACAGTTTAGAAGAAATCAATAGGCTGATTAATAATAATAATAATAATAATAATAATTTTTCACTCAATGAAAATTACAAGAGTGGAGAGACATTCATGTATTC
TTGTTGA
Protein sequenceShow/hide protein sequence
MGLISSNFSQASRPLHTAANPSPSCNNSNMQLVQPNYYYYYDHKQENILSFGGDHQAASCSSSDGSSGGNHLGYGRGEMEYDQNGKFYGVMKKENGCSDKQSGVRKEETP
LEYSLEEINRLINNNNNNNNNFSLNENYKSGETFMYSC