; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G10160 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G10160
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSplicing factor U2af small subunit B-like
Genome locationClcChr04:23760081..23763105
RNA-Seq ExpressionClc04G10160
SyntenyClc04G10160
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0006096 - glycolytic process (biological process)
GO:0000015 - phosphopyruvate hydratase complex (cellular component)
GO:0005681 - spliceosomal complex (cellular component)
GO:0089701 - U2AF (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004634 - phosphopyruvate hydratase activity (molecular function)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR000571 - Zinc finger, CCCH-type
IPR003954 - RNA recognition motif domain, eukaryote
IPR009145 - U2 auxiliary factor small subunit
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604370.1 Splicing factor U2af small subunit A, partial [Cucurbita argyrosperma subsp. sororia]3.9e-12072.27Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANAL NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSR RRSRS+SQSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGGLEAVALGIEEDGVGALEGGGIEVRLGKVVLKDGLRLNSGTGTGKRQITVVIIRMSRMLVEAMTLHKMKMNSILLSSTRENGGCRPC
        SPH+HHG+D++  G         +                +     G R  S  G   R          R  +E     +   +++L     +      C
Subjt:  SPHKHHGYDEQAGGLEAVALGIEEDGVGALEGGGIEVRLGKVVLKDGLRLNSGTGTGKRQITVVIIRMSRMLVEAMTLHKMKMNSILLSSTRENGGCRPC

Query:  LKEIFLVWLLSGGFAGFDVMF
        LK   LVWLLSGGFAGFDVMF
Subjt:  LKEIFLVWLLSGGFAGFDVMF

TYK07378.1 enolase [Cucumis melo var. makuwa]2.1e-11897.2Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS+S+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+E++ G
Subjt:  SPHKHHGYDEQAGG

XP_004143302.1 splicing factor U2af small subunit B [Cucumis sativus]2.1e-11897.2Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS+S+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+E++ G
Subjt:  SPHKHHGYDEQAGG

XP_008462532.1 PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo]2.1e-11897.2Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS+S+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+E++ G
Subjt:  SPHKHHGYDEQAGG

XP_038882602.1 splicing factor U2af small subunit B-like [Benincasa hispida]9.5e-11997.66Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+++  G
Subjt:  SPHKHHGYDEQAGG

TrEMBL top hitse value%identityAlignment
A0A0A0KF96 Uncharacterized protein1.0e-11897.2Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS+S+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+E++ G
Subjt:  SPHKHHGYDEQAGG

A0A1S3CH52 splicing factor U2af small subunit B-like1.0e-11897.2Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS+S+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+E++ G
Subjt:  SPHKHHGYDEQAGG

A0A5A7SM18 Splicing factor U2af small subunit B-like1.0e-11897.2Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS+S+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+E++ G
Subjt:  SPHKHHGYDEQAGG

A0A5D3C894 Phosphopyruvate hydratase1.0e-11897.2Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS+S+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPHKHHGY+E++ G
Subjt:  SPHKHHGYDEQAGG

A0A6J1HGT3 splicing factor U2af small subunit B-like2.3e-11896.73Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ+LDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGR+RRRRSRSRSQS+
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGG
        SPH+HHGYDE+  G
Subjt:  SPHKHHGYDEQAGG

SwissProt top hitse value%identityAlignment
A1A4K8 Splicing factor U2AF 35 kDa subunit1.4e-6756.64Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEEL-SKYGDLESLN
        MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P   +   D    A+   ++Q+H+++F+E++F E+  KYG++E +N
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEEL-SKYGDLESLN

Query:  ICDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQS
        +CDNL DH+VGNVYV+FR EE A  A+ +LN R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK ISRELRR L+GR RR++ RSRS+S
Subjt:  ICDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQS

Query:  RSPHKHHGYDEQAGGLEAVALGIEED
        R   +    D   GG      G E D
Subjt:  RSPHKHHGYDEQAGGLEAVALGIEED

Q6AUG0 Splicing factor U2af small subunit B4.9e-9470.51Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITPGVD QGQ +DP K+Q+HFEDFYED++EELSK+G++E+LN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR
        CDNLADHM+GNVYVQFREEEQA  A + L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I RELRR+L+G  R RRS  RS+S 
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSR

Query:  SPHKHHGYDEQAGGLEAVALGIEEDGVGALEGGG
        SP +H   +           G    G G   GGG
Subjt:  SPHKHHGYDEQAGGLEAVALGIEEDGVGALEGGG

Q9FMY5 Splicing factor U2af small subunit B6.6e-9979.36Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDPQGQ LDP K+QDHFEDFYED+FEEL+K+G++ESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSR---RRRSRSRS
        CDNLADHM+GNVYV F+EE+ AA AL  L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISRELRR+LFGR R   RR SRSRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSR---RRRSRSRS

Query:  QSRSPH--KHHGYDEQAG
        +S SP   + H  + + G
Subjt:  QSRSPH--KHHGYDEQAG

Q9S709 Splicing factor U2af small subunit A8.7e-9980.09Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QGQ LDPRK+Q+HFEDF+EDLFEEL K+G++ESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR-----RRSRS
        CDNLADHM+GNVYVQF+EE+QAA AL  L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SRELRR+LFGR RR      RSRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR-----RRSRS

Query:  RSQSRSPHKHHGYDEQ
        RS+S SP      D +
Subjt:  RSQSRSPHKHHGYDEQ

Q9ZQW8 Splicing factor U2af small subunit A4.5e-9576.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITPG+D QG  +DP K+Q  FEDFYED+FEELSKYG++ESL++
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG---RSRRRRSRSRS
        CDN ADHM+GNVYVQFREE+QAA AL  L GR+Y+GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K+I R+LR+RLFG   RSRR  S  RS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG---RSRRRRSRSRS

Query:  QSRSP-HKHHGYDEQA
        +S SP H    YD ++
Subjt:  QSRSP-HKHHGYDEQA

Arabidopsis top hitse value%identityAlignment
AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein9.1e-3540.12Show/hide
Query:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHM
        FGTE+D+ +CPF+ K GACR G RCSR+H  P+ S TLL+ NMY  P +       +G      + +  +E+FYED+  E  KYG+L +  +C N + H+
Subjt:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHM

Query:  VGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH
         GNVYV +R  E A  A  ++NGR++AG+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H
Subjt:  VGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH

AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative6.2e-10080.09Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QGQ LDPRK+Q+HFEDF+EDLFEEL K+G++ESLNI
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR-----RRSRS
        CDNLADHM+GNVYVQF+EE+QAA AL  L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SRELRR+LFGR RR      RSRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR-----RRSRS

Query:  RSQSRSPHKHHGYDEQ
        RS+S SP      D +
Subjt:  RSQSRSPHKHHGYDEQ

AT1G27650.2 U2 snRNP auxiliary factor small subunit, putative9.6e-6975.9Show/hide
Query:  MYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFR
        MYQRPDMITPGVD QGQ LDPRK+Q+HFEDF+EDLFEEL K+G++ESLNICDNLADHM+GNVYVQF+EE+QAA AL  L GRFY+GRPII DFSPVTDFR
Subjt:  MYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFR

Query:  EATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR-----RRSRSRSQSRSPHKHHGYDEQ
        EATCRQYEEN CNRGGYCNFMH+K +SRELRR+LFGR RR      RSRSRS+S SP      D +
Subjt:  EATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR-----RRSRSRSQSRSPHKHHGYDEQ

AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein4.7e-10079.36Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDPQGQ LDP K+QDHFEDFYED+FEEL+K+G++ESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSR---RRRSRSRS
        CDNLADHM+GNVYV F+EE+ AA AL  L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISRELRR+LFGR R   RR SRSRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSR---RRRSRSRS

Query:  QSRSPH--KHHGYDEQAG
        +S SP   + H  + + G
Subjt:  QSRSPH--KHHGYDEQAG

AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein4.7e-10079.36Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDPQGQ LDP K+QDHFEDFYED+FEEL+K+G++ESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNI

Query:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSR---RRRSRSRS
        CDNLADHM+GNVYV F+EE+ AA AL  L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISRELRR+LFGR R   RR SRSRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSR---RRRSRSRS

Query:  QSRSPH--KHHGYDEQAG
        +S SP   + H  + + G
Subjt:  QSRSPH--KHHGYDEQAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAACACTTGGCTTCAATTTTCGGAACGGAGAAGGATAGGGTTAACTGCCCTTTCTACTTCAAGATAGGAGCCTGTAGACATGGAGATCGGTGCTCTAGGCTTCA
CACCAAGCCCAGCATCAGCCCTACACTCCTCCTCTCTAATATGTATCAGAGACCTGATATGATCACCCCCGGCGTCGACCCTCAGGGCCAAGCCCTTGATCCCCGCAAGG
TTCAAGATCACTTTGAGGACTTTTATGAAGATCTATTTGAGGAGTTGAGCAAATACGGAGATCTCGAAAGCTTAAATATTTGTGATAATTTGGCTGACCATATGGTGGGC
AATGTCTATGTTCAGTTTAGAGAAGAAGAACAAGCTGCAAATGCCCTTCACAATCTTAATGGACGCTTTTATGCAGGTCGACCCATCATTGTTGACTTCTCTCCTGTGAC
GGATTTTCGAGAAGCTACTTGCAGGCAGTATGAGGAAAACGTATGTAACCGTGGTGGCTATTGTAACTTTATGCATCTGAAGAAGATAAGCAGAGAGTTGAGAAGACGTT
TATTTGGGAGGAGCAGGCGCAGGCGTAGCCGAAGCCGAAGTCAAAGTCGCAGCCCCCACAAGCATCATGGATATGATGAACAAGCAGGAGGCCTAGAAGCCGTAGCCCTA
GGCATAGAGGAGGACGGAGTCGGAGCCCTGGAGGGAGGAGGAATAGAAGTCCGGTTAGGGAAAGTAGTGCTGAAAGACGGGCTAAGATTGAACAGTGGAACAGGGACAGG
GAAAAGGCAGATAACGGTAGTAATCATCAGGATGTCAAGGATGTTGGTGGAAGCAATGACCTTGCACAAAATGAAGATGAATTCGATCCTTCTAAGCAGTACTAGAGAAA
ATGGTGGATGCCGTCCTTGCCTGAAAGAAATATTTCTGGTTTGGCTGTTATCTGGAGGATTTGCAGGATTTGATGTGATGTTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAACACTTGGCTTCAATTTTCGGAACGGAGAAGGATAGGGTTAACTGCCCTTTCTACTTCAAGATAGGAGCCTGTAGACATGGAGATCGGTGCTCTAGGCTTCA
CACCAAGCCCAGCATCAGCCCTACACTCCTCCTCTCTAATATGTATCAGAGACCTGATATGATCACCCCCGGCGTCGACCCTCAGGGCCAAGCCCTTGATCCCCGCAAGG
TTCAAGATCACTTTGAGGACTTTTATGAAGATCTATTTGAGGAGTTGAGCAAATACGGAGATCTCGAAAGCTTAAATATTTGTGATAATTTGGCTGACCATATGGTGGGC
AATGTCTATGTTCAGTTTAGAGAAGAAGAACAAGCTGCAAATGCCCTTCACAATCTTAATGGACGCTTTTATGCAGGTCGACCCATCATTGTTGACTTCTCTCCTGTGAC
GGATTTTCGAGAAGCTACTTGCAGGCAGTATGAGGAAAACGTATGTAACCGTGGTGGCTATTGTAACTTTATGCATCTGAAGAAGATAAGCAGAGAGTTGAGAAGACGTT
TATTTGGGAGGAGCAGGCGCAGGCGTAGCCGAAGCCGAAGTCAAAGTCGCAGCCCCCACAAGCATCATGGATATGATGAACAAGCAGGAGGCCTAGAAGCCGTAGCCCTA
GGCATAGAGGAGGACGGAGTCGGAGCCCTGGAGGGAGGAGGAATAGAAGTCCGGTTAGGGAAAGTAGTGCTGAAAGACGGGCTAAGATTGAACAGTGGAACAGGGACAGG
GAAAAGGCAGATAACGGTAGTAATCATCAGGATGTCAAGGATGTTGGTGGAAGCAATGACCTTGCACAAAATGAAGATGAATTCGATCCTTCTAAGCAGTACTAGAGAAA
ATGGTGGATGCCGTCCTTGCCTGAAAGAAATATTTCTGGTTTGGCTGTTATCTGGAGGATTTGCAGGATTTGATGTGATGTTTGGTTGA
Protein sequenceShow/hide protein sequence
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVG
NVYVQFREEEQAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSQSRSPHKHHGYDEQAGGLEAVAL
GIEEDGVGALEGGGIEVRLGKVVLKDGLRLNSGTGTGKRQITVVIIRMSRMLVEAMTLHKMKMNSILLSSTRENGGCRPCLKEIFLVWLLSGGFAGFDVMFG