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Clc04G10470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G10470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein BIC1-like
Genome locationClcChr04:24031925..24032382
RNA-Seq ExpressionClc04G10470
SyntenyClc04G10470
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025256.1 protein BIC1 isoform X1 [Cucumis melo var. makuwa]6.7e-3671.76Show/hide
Query:  MTLPL-KPNSPLFLPH----PLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRA
        MTLP   PNS LFLPH     LQESDQ+      ++ D    L   E+ RERLKRHR+AVAG VWIP+KWGKEEFLKDWIDGSAFEASLFPSG+VSAR A
Subjt:  MTLPL-KPNSPLFLPH----PLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRA

Query:  LARDAKRLSPNNNTATA-AGAGAGALRIFNS
        LARDAKRLSPNNNTATA A A AGALRI NS
Subjt:  LARDAKRLSPNNNTATA-AGAGAGALRIFNS

KAG7027199.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-3676.42Show/hide
Query:  PLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRL
        PLKP SPL LP   QESDQ   K D  +L     L  EENG ERLKRHRVAVAGQVWIPEKWGKEE LKDWIDGSAFEASLFPSG+VSARRALAR+AKR 
Subjt:  PLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRL

Query:  SPNNNTATAAGAGAGALRIFNSC
        SPNNN+ATA+ A AGALRI NSC
Subjt:  SPNNNTATAAGAGAGALRIFNSC

XP_022972606.1 protein BIC1-like [Cucurbita maxima]3.9e-3674.6Show/hide
Query:  MTLPLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDA
        +T PLKP SPL LP   QESDQ   K D  +L     L  EENG ERLKRHRVAVAGQVWIPEKWGKEE LKDWIDGSAFEASLFPSG+V ARRALAR+A
Subjt:  MTLPLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDA

Query:  KRLSPNNNTATAAGAGAGALRIFNSC
        KR SPNNN+ATA+ A AGALRI NSC
Subjt:  KRLSPNNNTATAAGAGAGALRIFNSC

XP_023518112.1 protein BIC1-like [Cucurbita pepo subsp. pepo]1.0e-3675.4Show/hide
Query:  MTLPLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDA
        +T PLKP SPL LP   QESDQ   K D  +L     L  EENG ERLKRHRVAVAGQVWIPEKWGKEE LKDWIDGSAFEASLFPSG+VSARRALAR+A
Subjt:  MTLPLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDA

Query:  KRLSPNNNTATAAGAGAGALRIFNSC
        KR SPNNN+ATA+ A AGALRI NSC
Subjt:  KRLSPNNNTATAAGAGAGALRIFNSC

XP_038882952.1 protein BIC2-like [Benincasa hispida]4.8e-5086.05Show/hide
Query:  MTLPL-KPNSPLFLPHPLQESDQSRPKDDQTQLD-TSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALAR
        MTLP  KPNSPLFL HPLQESDQSRP+D QT+LD TSS L  EE+GRERLKRHRVAVAGQVWIP+KWGKEEFLKDWIDGSAFEASLFPSG+VSARRALAR
Subjt:  MTLPL-KPNSPLFLPHPLQESDQSRPKDDQTQLD-TSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALAR

Query:  DAKRLSPNNN-TATAAGAGAGALRIFNSC
        DAKRLSPNNN  AT A AGAGALRI NSC
Subjt:  DAKRLSPNNN-TATAAGAGAGALRIFNSC

TrEMBL top hitse value%identityAlignment
A0A0A0KFC4 Uncharacterized protein7.2e-3671.97Show/hide
Query:  MTLPL-KPNSPLFLPH--PLQESDQSRPKDDQTQLDTSSPLVLE-ENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRAL
        MTLP   PNS LFLPH   LQESDQ+      ++ D   PL  E E+ RERLKRHR+AVAG VWIP+KWGKEEFLKDWIDGSAFEASLF SG+VSAR AL
Subjt:  MTLPL-KPNSPLFLPH--PLQESDQSRPKDDQTQLDTSSPLVLE-ENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRAL

Query:  ARDAKRLSPNNNTATAAG---AGAGALRIFNS
        ARDAKRLSPNNNTATAA    A AGALRI NS
Subjt:  ARDAKRLSPNNNTATAAG---AGAGALRIFNS

A0A1R3II58 Uncharacterized protein3.1e-1858.7Show/hide
Query:  PLQESDQSRPKDDQTQL-----DTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKR
        PLQ S  S  K ++ +      +TSS +V EENGRERLKRHR+ VAG+VWIPE WG+EE LKDWID SAF+ASL P+G++SAR AL  + +R
Subjt:  PLQESDQSRPKDDQTQL-----DTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKR

A0A5D3C697 Protein BIC1 isoform X13.2e-3671.76Show/hide
Query:  MTLPL-KPNSPLFLPH----PLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRA
        MTLP   PNS LFLPH     LQESDQ+      ++ D    L   E+ RERLKRHR+AVAG VWIP+KWGKEEFLKDWIDGSAFEASLFPSG+VSAR A
Subjt:  MTLPL-KPNSPLFLPH----PLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRA

Query:  LARDAKRLSPNNNTATA-AGAGAGALRIFNS
        LARDAKRLSPNNNTATA A A AGALRI NS
Subjt:  LARDAKRLSPNNNTATA-AGAGAGALRIFNS

A0A6J1HFE1 protein BIC1-like2.1e-3575.61Show/hide
Query:  PLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRL
        PLKP SPL LP   QESDQ   K D  +L     L  EENG ERLKRHRVAVAGQVWIPEKWGKEE LKDWIDGSAFEASLFPSG+VSARRALAR+AKR 
Subjt:  PLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRL

Query:  SPNNNTATAAGAGAGALRIFNSC
        SPNNN+A AA A AG+LRI NSC
Subjt:  SPNNNTATAAGAGAGALRIFNSC

A0A6J1I6F1 protein BIC1-like1.9e-3674.6Show/hide
Query:  MTLPLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDA
        +T PLKP SPL LP   QESDQ   K D  +L     L  EENG ERLKRHRVAVAGQVWIPEKWGKEE LKDWIDGSAFEASLFPSG+V ARRALAR+A
Subjt:  MTLPLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDA

Query:  KRLSPNNNTATAAGAGAGALRIFNSC
        KR SPNNN+ATA+ A AGALRI NSC
Subjt:  KRLSPNNNTATAAGAGAGALRIFNSC

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC11.0e-1550.57Show/hide
Query:  SDQSRPKDDQTQLDTSSPLVLEEN----GRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKR
        S  S  K D   L+       EE+    GRERLK+HR  +AG+VWIPE WG+EE LKDWID S F+  L P+G+ SAR AL  +A+R
Subjt:  SDQSRPKDDQTQLDTSSPLVLEEN----GRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKR

Q9M280 Protein BIC25.4e-1239.5Show/hide
Query:  NSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRLSPNN
        N P     P+      R K ++T   T  P     +GR+RLKRHR  VAG+V IP+ WGKE  L  W+D S F+A+   S +VSAR AL  D      + 
Subjt:  NSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRLSPNN

Query:  NTATAAGAGAGALRIFNSC
        + A A G+    LR+ +SC
Subjt:  NTATAAGAGAGALRIFNSC

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein3.8e-1339.5Show/hide
Query:  NSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRLSPNN
        N P     P+      R K ++T   T  P     +GR+RLKRHR  VAG+V IP+ WGKE  L  W+D S F+A+   S +VSAR AL  D      + 
Subjt:  NSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRLSPNN

Query:  NTATAAGAGAGALRIFNSC
        + A A G+    LR+ +SC
Subjt:  NTATAAGAGAGALRIFNSC

AT3G52740.1 unknown protein7.4e-1750.57Show/hide
Query:  SDQSRPKDDQTQLDTSSPLVLEEN----GRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKR
        S  S  K D   L+       EE+    GRERLK+HR  +AG+VWIPE WG+EE LKDWID S F+  L P+G+ SAR AL  +A+R
Subjt:  SDQSRPKDDQTQLDTSSPLVLEEN----GRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCCCTCTCAAACCCAACTCCCCATTATTCCTTCCCCATCCTCTCCAAGAATCAGATCAAAGTCGTCCTAAAGATGATCAAACGCAGCTCGATACTTCCTCCCC
TCTCGTGTTGGAGGAGAATGGTCGGGAACGGTTGAAGCGCCACCGTGTGGCCGTGGCAGGGCAGGTTTGGATCCCGGAGAAGTGGGGAAAGGAGGAGTTTCTGAAGGATT
GGATCGACGGCTCGGCATTCGAAGCCTCTTTGTTCCCCTCCGGGGTTGTCTCGGCTCGCCGGGCTTTGGCTCGAGATGCTAAGAGATTGTCGCCGAATAACAACACTGCC
ACCGCCGCCGGTGCCGGTGCCGGAGCTTTGAGAATATTTAACAGTTGTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAATACACCATGACTCTCCCTCTCAAACCCAACTCCCCATTATTCCTTCCCCATCCTCTCCAAGAATCAGATCAAAGTCGTCCTAAAGATGATCAAACGCAG
CTCGATACTTCCTCCCCTCTCGTGTTGGAGGAGAATGGTCGGGAACGGTTGAAGCGCCACCGTGTGGCCGTGGCAGGGCAGGTTTGGATCCCGGAGAAGTGGGGAAAGGA
GGAGTTTCTGAAGGATTGGATCGACGGCTCGGCATTCGAAGCCTCTTTGTTCCCCTCCGGGGTTGTCTCGGCTCGCCGGGCTTTGGCTCGAGATGCTAAGAGATTGTCGC
CGAATAACAACACTGCCACCGCCGCCGGTGCCGGTGCCGGAGCTTTGAGAATATTTAACAGTTGTTAAACATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATAT
Protein sequenceShow/hide protein sequence
MTLPLKPNSPLFLPHPLQESDQSRPKDDQTQLDTSSPLVLEENGRERLKRHRVAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLFPSGVVSARRALARDAKRLSPNNNTA
TAAGAGAGALRIFNSC