; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc04G10550 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G10550
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR50-like
Genome locationClcChr04:24099808..24100738
RNA-Seq ExpressionClc04G10550
SyntenyClc04G10550
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025249.1 auxin-induced protein X15 [Cucumis melo var. makuwa]2.0e-6294.07Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDRLELTED DS SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_008462582.1 PREDICTED: auxin-induced protein X15 [Cucumis melo]5.2e-6394.07Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDRLELTEDHDS SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAF+EIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_022962864.1 auxin-induced protein 6B-like [Cucurbita moschata]2.9e-6192.65Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESE-PSHNECLLTDRLELTEDHDSQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        MLGKKMVSFKKLAKKVKVRVGTE E  SHNECLL DRLE ++DHDS SPS SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESE-PSHNECLLTDRLELTEDHDSQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_031742714.1 auxin-induced protein 6B [Cucumis sativus]9.9e-6292.59Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGTE+E SHNECLLTDR EL  DHDS SPSSPTSTPTGSFAIYVG+ERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_038883394.1 auxin-responsive protein SAUR50 [Benincasa hispida]1.3e-6697.76Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTE+E SHNECLLTDRLELTEDHDS SPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

TrEMBL top hitse value%identityAlignment
A0A0A0KEY4 Uncharacterized protein4.8e-6292.59Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGTE+E SHNECLLTDR EL  DHDS SPSSPTSTPTGSFAIYVG+ERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A1S3CHA6 auxin-induced protein X152.5e-6394.07Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDRLELTEDHDS SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAF+EIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A5A7SIW6 Auxin-induced protein X159.6e-6394.07Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDRLELTED DS SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1HIA1 auxin-induced protein 6B-like1.4e-6192.65Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESE-PSHNECLLTDRLELTEDHDSQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        MLGKKMVSFKKLAKKVKVRVGTE E  SHNECLL DRLE ++DHDS SPS SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESE-PSHNECLLTDRLELTEDHDSQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1IC38 auxin-responsive protein SAUR50-like3.1e-6192.54Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTE E SHNE LL DRLE ++DHDS SP SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR402.0e-0936.36Show/hide
Query:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        +S P+G   + VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+++V ++
Subjt:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

O65695 Auxin-responsive protein SAUR504.4e-1244.78Show/hide
Query:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        P   P G F +YVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    FQ + S +
Subjt:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

P0DKL1 Auxin-responsive protein SAUR501.6e-0938.81Show/hide
Query:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        P   P G F +YVG+ R R++VP S L HP F+ LL ++  EFGF     +++PC    F    S +
Subjt:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

P32295 Indole-3-acetic acid-induced protein ARG72.0e-0940.54Show/hide
Query:  SQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQ-RNALVVPCSVSAFQEIVSAV
        +++ S     P G  A+YVG+  +RFV+P S L+ PLF+ LL +A  EFG++     L +PCS   FQ I S +
Subjt:  SQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQ-RNALVVPCSVSAFQEIVSAV

Q9LTV3 Auxin-responsive protein SAUR724.8e-1140.28Show/hide
Query:  QSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        +S    +S P G   +YVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+ I+ ++
Subjt:  QSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

Arabidopsis top hitse value%identityAlignment
AT2G36210.1 SAUR-like auxin-responsive protein family2.4e-3455.63Show/hide
Query:  MLGKKMVSFKKLAKKVK-----VRVGTE--SEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF
        MLGK++ SFK LAKK+K      R G E  SE ++NE LL +  +       ++    + TPTG+FA+YVG+ER + VVPTS+L+HPLFRMLLDK++ EF
Subjt:  MLGKKMVSFKKLAKKVK-----VRVGTE--SEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF

Query:  -GFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
          FEQ+  LVVPCS+S FQ++V+AVE CNG FDFGE VEEFL
Subjt:  -GFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

AT3G43120.1 SAUR-like auxin-responsive protein family1.3e-1635.88Show/hide
Query:  KKMVSFKKLAKKVK-VRVGTESE--------------PSHNECLL-TDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLD
        K++V  K++ +K + V +G++S+              P  N+ LL     +  E+   QSP  P   P G  A+YVG E +RF++PT+FLSH LF++LL+
Subjt:  KKMVSFKKLAKKVK-VRVGTESE--------------PSHNECLL-TDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLD

Query:  KAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        KA  E+GF+   AL +PC V  F+ ++  +E
Subjt:  KAYREFGFEQRNALVVPCSVSAFQEIVSAVE

AT5G20810.1 SAUR-like auxin-responsive protein family3.2e-1836.64Show/hide
Query:  KKMVSFKKLAKKVK-VRVGTESE---------------PSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLD
        +++V  K++ +K + V +G +SE               P+ N+ LL  +   +++   QSP  P   P G+ A+YVG E +RF++PTS+LSH LF++LL+
Subjt:  KKMVSFKKLAKKVK-VRVGTESE---------------PSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLD

Query:  KAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  KAYREFGFEQRNALVVPCSVSAFQEIVSAVE

AT5G20810.2 SAUR-like auxin-responsive protein family3.2e-1836.64Show/hide
Query:  KKMVSFKKLAKKVK-VRVGTESE---------------PSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLD
        +++V  K++ +K + V +G +SE               P+ N+ LL  +   +++   QSP  P   P G+ A+YVG E +RF++PTS+LSH LF++LL+
Subjt:  KKMVSFKKLAKKVK-VRVGTESE---------------PSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLD

Query:  KAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  KAYREFGFEQRNALVVPCSVSAFQEIVSAVE

AT5G66260.1 SAUR-like auxin-responsive protein family1.1e-1347.62Show/hide
Query:  PTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        P G F +YVG  R R V+P SFL+HP+F+MLL ++  EFGF Q N L +PC    F+ ++S++
Subjt:  PTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGCAAAAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACCGAGAGCGAACCATCGCACAACGAGTGTTTACTCACAGATCGGTT
GGAATTAACGGAGGATCACGATTCTCAGTCTCCGTCGTCTCCGACCTCGACGCCGACCGGCTCGTTCGCGATTTACGTTGGCGATGAACGGCAGCGCTTCGTCGTACCGA
CGAGTTTCTTGTCGCATCCGCTCTTCAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTGTTGTTCCTTGTAGTGTCTCTGCTTTT
CAAGAAATTGTGAGCGCTGTTGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTATAG
mRNA sequenceShow/hide mRNA sequence
CTTTTTCAGACCTCCATTTTTTCCATGTCCATGGATTCATAGCTTCATCTTCAAAAACCCTAGCTTACTCACCTCTACAATTTCTTCCTTCCTTCCATTTTTCTTACAGA
TCAGAACAATGCTTGGCAAAAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACCGAGAGCGAACCATCGCACAACGAGTGTTTACTCACA
GATCGGTTGGAATTAACGGAGGATCACGATTCTCAGTCTCCGTCGTCTCCGACCTCGACGCCGACCGGCTCGTTCGCGATTTACGTTGGCGATGAACGGCAGCGCTTCGT
CGTACCGACGAGTTTCTTGTCGCATCCGCTCTTCAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTGTTGTTCCTTGTAGTGTCT
CTGCTTTTCAAGAAATTGTGAGCGCTGTTGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTATAGAACAGGCGAAATGCAGAGGAATATCAG
TTCGCTAGGGTTTTGAATCGTTTGATCCTTTCGGTCGTGAAATTCATCGTCGAGGAGGAGGATGCGATACAATTCGATTCGATTCGATTCGATTCAAATGAATTCGGCCG
ATTTTACTATTCGATTGGGTGTGAAATGTGCATCTCTTCATCTCAAAATTCTAATTCACATCCGATTCGATACGATGATCCATTTTTCTTCAGAAGTTGTAAAATCAGAG
CTGTAATTGTGCGATGAAATTGAATATGTAGTTGTAATTAATTTCGTAATATGTATGAATATTGTGTTTAGGTAATTTGTCAAATTTCTTGAAAATTTTCATGGCAGCTG
GCATTGGCAAGTCAAGAAATATTACCAAAGAGAAGTGATTTTTCTATTATC
Protein sequenceShow/hide protein sequence
MLGKKMVSFKKLAKKVKVRVGTESEPSHNECLLTDRLELTEDHDSQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAF
QEIVSAVECCNGRFDFGEIVEEFL