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Clc04G10980 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G10980
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:24573832..24576972
RNA-Seq ExpressionClc04G10980
SyntenyClc04G10980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584315.1 Vacuolar protein sorting-associated protein 26C, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1473.24Show/hide
Query:  VIASRASRVAEKPCKLYTLDNPCSQNPFF----ADSTSLPTDSSLPLSLLQTLFSLSSSISLSALILTSNL
        ++  RA+RVAEKPCKL TLDNPC QNP F    A STSLPTD +L LSLLQT FSLSSSISL+ALILTS L
Subjt:  VIASRASRVAEKPCKLYTLDNPCSQNPFF----ADSTSLPTDSSLPLSLLQTLFSLSSSISLSALILTSNL
XP_022924204.1 putative nuclease HARBI1 isoform X1 [Cucurbita moschata]5.3e-1768.24Show/hide
Query:  PCKLYTLDNPCSQNPFF----ADSTSLPTDSSLPLSLLQTLFSLSSSISLSALILTSNLPHFFPTHRRRFWFSNEEDSLQSSLSI
        P KL TLDNPC QNP F    A STSLPTD +L LSLLQT FSLSSSISL+ALILTS L   F THRRRFWF   ED+L S+L++
Subjt:  PCKLYTLDNPCSQNPFF----ADSTSLPTDSSLPLSLLQTLFSLSSSISLSALILTSNLPHFFPTHRRRFWFSNEEDSLQSSLSI
TrEMBL top hitse value%identityAlignment
A0A6J1E8H3 putative nuclease HARBI1 isoform X12.5e-1768.24Show/hide
Query:  PCKLYTLDNPCSQNPFF----ADSTSLPTDSSLPLSLLQTLFSLSSSISLSALILTSNLPHFFPTHRRRFWFSNEEDSLQSSLSI
        P KL TLDNPC QNP F    A STSLPTD +L LSLLQT FSLSSSISL+ALILTS L   F THRRRFWF   ED+L S+L++
Subjt:  PCKLYTLDNPCSQNPFF----ADSTSLPTDSSLPLSLLQTLFSLSSSISLSALILTSNLPHFFPTHRRRFWFSNEEDSLQSSLSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATAGCTTCCAGAGCAAGCAGAGTCGCTGAAAAACCCTGCAAACTCTACACTCTGGACAACCCCTGCTCCCAAAATCCCTTCTTTGCAGACTCTACTTCTCTACC
TACGGATTCTTCTCTGCCATTGTCTCTTCTTCAAACCCTCTTTTCACTTTCTTCTTCCATTTCCCTTTCTGCACTCATTTTGACCTCAAATCTTCCTCACTTTTTCCCCA
CTCACCGACGCCGTTTCTGGTTTTCAAACGAGGAGGACTCCCTCCAGAGTAGTCTTTCCATAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATAGCTTCCAGAGCAAGCAGAGTCGCTGAAAAACCCTGCAAACTCTACACTCTGGACAACCCCTGCTCCCAAAATCCCTTCTTTGCAGACTCTACTTCTCTACC
TACGGATTCTTCTCTGCCATTGTCTCTTCTTCAAACCCTCTTTTCACTTTCTTCTTCCATTTCCCTTTCTGCACTCATTTTGACCTCAAATCTTCCTCACTTTTTCCCCA
CTCACCGACGCCGTTTCTGGTTTTCAAACGAGGAGGACTCCCTCCAGAGTAGTCTTTCCATAGTTTAA
Protein sequenceShow/hide protein sequence
MVIASRASRVAEKPCKLYTLDNPCSQNPFFADSTSLPTDSSLPLSLLQTLFSLSSSISLSALILTSNLPHFFPTHRRRFWFSNEEDSLQSSLSIV