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Clc04G11295 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G11295
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr04:24866292..24866591
RNA-Seq ExpressionClc04G11295
SyntenyClc04G11295
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652552.1 hypothetical protein Csa_013579 [Cucumis sativus]7.4e-3080.22Show/hide
Query:  NSIGFLLSLKPISETVKMARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA
        N +  L SLKPIS  VKMARLMREI S+NGSFGLAGG+ Y LFW AL TL IIST+IFSCSDGMSK+RNST DVELYGGGCAAGCGAGCGA
Subjt:  NSIGFLLSLKPISETVKMARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA

KAG6572949.1 hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1880Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGA
        MARL+ EIGS +GSFGL+ GDI  LF AAL TL IIS I FSCSDG+SKERNSTADVELYGGGCAAGCGA
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGA

KAG6584341.1 hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2589.33Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMS-KERNSTADVELYGGGCAAGCGAGCGA
        MARLMRE GS+NGSFGLA GDIYLLFWAAL TL IISTIIFSCSDGMS K+RNSTADVELYG GCAAGCGAGCGA
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMS-KERNSTADVELYGGGCAAGCGAGCGA

PON38946.1 hypothetical protein PanWU01x14_308610 [Parasponia andersonii]1.6e-1360.81Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFW-AALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCG
        M RL RE    +G  G +    +L+F+   LVTL I+STIIFSC+DG+SKE+ S AD ELYGGGCAAGCGAGCG
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFW-AALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCG

XP_015882794.1 uncharacterized protein LOC107418606 [Ziziphus jujuba]3.3e-1463.51Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA
        M RL R++ S +GS G AG   +++ W AL+ + IIS IIFSC+DG+SKE+ STAD ELYGGGCAAGCGAGCGA
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU7 Uncharacterized protein1.4e-2685.14Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA
        MARLMREI S+NGSFGLAGG+ Y LFW AL TL IIST+IFSCSDGMSK+RNST DVELYGGGCAAGCGAGCGA
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA

A0A2P5AQX4 Uncharacterized protein8.0e-1460.81Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFW-AALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCG
        M RL RE    +G  G +    +L+F+   LVTL I+STIIFSC+DG+SKE+ S AD ELYGGGCAAGCGAGCG
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFW-AALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCG

A0A6P3ZT85 uncharacterized protein LOC1074186061.6e-1463.51Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA
        M RL R++ S +GS G AG   +++ W AL+ + IIS IIFSC+DG+SKE+ STAD ELYGGGCAAGCGAGCGA
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA

A0A803R004 Uncharacterized protein1.2e-1459.46Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA
        M RL RE+ + +G  G   G   +     LVTL I+STIIFSC+DG+SKE+ S  D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA

A0A803R005 Uncharacterized protein1.2e-1459.46Show/hide
Query:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA
        M RL RE+ + +G  G   G   +     LVTL I+STIIFSC+DG+SKE+ S  D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68238.1 unknown protein1.9e-0748.15Show/hide
Query:  GDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCG
        G++ L  WAA+V  S+I+ +IFSCSD  SK   +    ++ G  CAAGCG GCG
Subjt:  GDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCG

AT3G18250.1 Putative membrane lipoprotein5.7e-0441.51Show/hide
Query:  IYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGC-AAGCGAGCG
        ++ + + A++   I+S ++FSC+DG+S  R +T+     GGGC  AGCG GCG
Subjt:  IYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGC-AAGCGAGCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTTCCCAAAAAAACAAGAACTCAATTGGATTTCTTCTTTCTCTGAAACCCATCTCGGAAACTGTAAAAATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAA
TGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTTTGGTTACACTCTCCATAATTTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAA
AAGAGAGGAATTCCACGGCCGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTTCCCAAAAAAACAAGAACTCAATTGGATTTCTTCTTTCTCTGAAACCCATCTCGGAAACTGTAAAAATGGCGAGACTAATGAGAGAAATTGGCAGTGAAAA
TGGAAGTTTTGGCCTCGCCGGCGGTGACATTTATTTGCTGTTTTGGGCGGCTTTGGTTACACTCTCCATAATTTCAACCATAATTTTCTCTTGCTCCGACGGCATGTCAA
AAGAGAGGAATTCCACGGCCGACGTCGAGCTTTACGGCGGCGGTTGCGCCGCCGGGTGCGGCGCTGGATGTGGTGCTTGA
Protein sequenceShow/hide protein sequence
MKTSQKNKNSIGFLLSLKPISETVKMARLMREIGSENGSFGLAGGDIYLLFWAALVTLSIISTIIFSCSDGMSKERNSTADVELYGGGCAAGCGAGCGA