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Clc04G11310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc04G11310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationClcChr04:24877941..24878471
RNA-Seq ExpressionClc04G11310
SyntenyClc04G11310
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019930.1 hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3489.77Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIA+SIL+MF+M E+S+AVTCSPLQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTC TPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

TYJ99011.1 non-specific lipid-transfer protein 2 [Cucumis melo var. makuwa]7.1e-3589.77Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIALSI++MF+MVEISMAVTCSP+QLSSCVSAITS+VPPS LCCSKIKEQ+PCLCKYMQNPTLKKFVASPNA+KVA+TCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

XP_004137484.1 non-specific lipid-transfer protein 2 [Cucumis sativus]1.1e-3592.05Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIALSI++MF+ VEI+MAVTCSP+QLSSCVSAITS+VPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

XP_022923700.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]1.4e-3590.91Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIA+SIL+MF+M E+S+AVTCSPLQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

XP_023000838.1 probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima]3.2e-3589.77Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIA++IL+MF+M E+S+AVTCSPLQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

TrEMBL top hitse value%identityAlignment
A0A0A0LVT5 AAI domain-containing protein5.3e-3692.05Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIALSI++MF+ VEI+MAVTCSP+QLSSCVSAITS+VPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

A0A5D3BJV8 Non-specific lipid-transfer protein 23.4e-3589.77Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIALSI++MF+MVEISMAVTCSP+QLSSCVSAITS+VPPS LCCSKIKEQ+PCLCKYMQNPTLKKFVASPNA+KVA+TCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

A0A6J1ECM2 non-specific lipid-transfer protein 2-like6.9e-3690.91Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIA+SIL+MF+M E+S+AVTCSPLQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

A0A6J1KNT4 probable non-specific lipid-transfer protein AKCS91.5e-3589.77Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIA++IL+MF+M E+S+AVTCSPLQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTCGTPFP
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

B7FM99 Chitinase / Hevein / PR-4 / Wheatwin23.1e-2874.44Show/hide
Query:  MKASQIALS--ILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        MKASQIA+   ++++ I V++SMAVTCSP+QLSSCVSAITS+ PPS LCCSKIKEQ+PCLC+YM+NP L+KFV +PNARKVANTCGTPFP
Subjt:  MKASQIALS--ILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 27.6e-0836.36Show/hide
Query:  TCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS
        +C+  QL+ C  AI     P+  CCS ++ Q+ C C++ ++P   ++V SPNARK  ++CG   P+
Subjt:  TCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS

P82353 Non-specific lipid-transfer protein 29.0e-1756.06Show/hide
Query:  VTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        VTCSP+QLS C+  I S  P    CC K++EQ+PCLC Y++NP+L+++V SPNARK+A+ CG P P
Subjt:  VTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

P82901 Non-specific lipid-transfer protein 2P1.2e-0840.62Show/hide
Query:  CSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG   P
Subjt:  CSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

P86809 Non-specific lipid-transfer protein 21.0e-1560.66Show/hide
Query:  TCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCG
        TCS +QLS C++AIT   PPS  CC+K+KEQKPCLC Y+++P LK +V SP ARK A++CG
Subjt:  TCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCG

Q43681 Probable non-specific lipid-transfer protein AKCS92.0e-1645.65Show/hide
Query:  MKASQIALSILMMFIMVE---ISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS
        MK S +   +++   +++   ++ AVTC+P +LSSCV AIT    PS  CCSK+K Q+PCLC Y++NP+LK++V SP A+KV + CG  +P+
Subjt:  MKASQIALSILMMFIMVE---ISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.1e-2253.93Show/hide
Query:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS
        M  S +AL+  ++ + V ++  VTCSP+QL+SC +A+TS+ PPS+ CC+K++EQ+PCLC YM+NPTL+++V+SPNARKV+N+C  P PS
Subjt:  MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-1342.17Show/hide
Query:  SILMMFIMVE---ISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        +IL++ I+ +   ++    C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP  K F+ SPNA+ +A  C  P+P
Subjt:  SILMMFIMVE---ISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.5e-2256.47Show/hide
Query:  SQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP
        S  AL+ +++ I+   + AVTCSP+QLS C +AITS+ PPS LCC+K+KEQ+PCLC YM+NP+L++FV++PNARKV+ +C  P P
Subjt:  SQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFP

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.7e-1550.75Show/hide
Query:  VTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS
        VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNARK    C   +P+
Subjt:  VTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.0e-1549.25Show/hide
Query:  VTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS
        VTC  +QLSSC + + + VPPS  CC K+KEQ+PC C Y+++P   ++V S NA+K   TCG P+P+
Subjt:  VTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTTCACAGATTGCACTAAGTATCTTAATGATGTTTATCATGGTGGAGATTTCAATGGCAGTGACATGCAGTCCATTGCAACTGAGTTCCTGTGTTAGTGCAAT
CACATCTGCAGTTCCACCTTCTAAGCTCTGCTGTTCTAAAATTAAGGAACAGAAACCCTGCCTTTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTC
CCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAGTGTTTGTAGTAAGACCAGAGGGTCAGTTATTATTCAAATGGGGAGAGCTAGTTGTGTTGAGTCC
TGCTTTTATGACATTCCCCCATTTTTGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTTCACAGATTGCACTAAGTATCTTAATGATGTTTATCATGGTGGAGATTTCAATGGCAGTGACATGCAGTCCATTGCAACTGAGTTCCTGTGTTAGTGCAAT
CACATCTGCAGTTCCACCTTCTAAGCTCTGCTGTTCTAAAATTAAGGAACAGAAACCCTGCCTTTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTC
CCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAGTGTTTGTAGTAAGACCAGAGGGTCAGTTATTATTCAAATGGGGAGAGCTAGTTGTGTTGAGTCC
TGCTTTTATGACATTCCCCCATTTTTGTCTTAG
Protein sequenceShow/hide protein sequence
MKASQIALSILMMFIMVEISMAVTCSPLQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPSVCSKTRGSVIIQMGRASCVES
CFYDIPPFLS